| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 11 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 12 |
xmlns:follow_up_v2.0="http://tcga.nci/bcr/xml/clinical/blca/followup/2.5/2.0" |
|
|
|
| 13 |
xmlns="http://tcga.nci/bcr/xml/clinical/blca/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/blca/2.4" |
| 14 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/blca/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/blca/2.4" |
| |
| 31 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/blca/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/blca/shared/2.5/TCGA_BCR.BLCA_Clinical_Shared_Datatypes.xsd" /> |
|
|
|
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/blca/followup/2.5/2.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/blca/followup/2.5/TCGA_BCR.BLCA_Clinical_FollowUp_v2.0.xsd" /> |
|
|
|
| |
| 47 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 54 |
<xs:element ref="shared:tissue_source_site" /> |
+- |
|
|
| 55 |
<xs:element ref="shared:patient_id" /> |
|
|
|
| 56 |
<xs:element ref="shared:bcr_patient_barcode" /> |
|
|
|
| 57 |
<xs:element ref="shared:bcr_patient_uuid" /> |
|
|
|
| 58 |
<xs:element ref="shared:informed_consent_verified" /> |
|
|
|
| 59 |
<xs:element ref="shared:icd_o_3_site" /> |
|
|
|
| 60 |
<xs:element ref="shared:icd_o_3_histology" /> |
|
|
|
| 61 |
<xs:element ref="shared:icd_10" /> |
|
|
|
| |
| 63 |
<xs:choice> |
+- |
|
|
| 64 |
<xs:sequence> |
|
|
|
| 65 |
<xs:element ref="shared:day_of_form_completion" /> |
|
|
|
| 66 |
<xs:element ref="shared:month_of_form_completion" /> |
|
|
|
| 67 |
<xs:element ref="shared:year_of_form_completion" /> |
|
|
|
| 68 |
</xs:sequence> |
|
|
|
| |
| 70 |
<xs:element ref="shared:days_to_form_completion" /> |
+- |
|
|
| 71 |
</xs:choice> |
|
|
|
| |
| 73 |
<xs:element ref="tissue_prospective_collection_indicator" /> |
+- |
|
|
| 74 |
<xs:element ref="tissue_retrospective_collection_indicator" /> |
|
|
|
| |
| |
|
-+ |
63 |
<xs:element ref="shared:vital_status" /> |
| |
|
|
64 |
<xs:element ref="shared:person_neoplasm_cancer_status" /> |
| |
| 93 |
<xs:element ref="shared:vital_status" /> |
+- |
|
|
| |
| 106 |
<xs:annotation> |
+- |
|
|
| 107 |
<xs:documentation xml:lang="en"> |
|
|
|
| 108 |
The Date for Last Known Alive was DEPRECATED. It |
|
|
|
| 109 |
was last placed on the TCGA Clinical Form 1.11. |
|
|
|
| 110 |
</xs:documentation> |
|
|
|
| 111 |
</xs:annotation> |
|
|
|
| |
| 122 |
<xs:choice> |
+- |
|
|
| 123 |
<xs:sequence> |
|
|
|
| 124 |
<xs:element ref="shared:day_of_death" /> |
|
|
|
| 125 |
<xs:element ref="shared:month_of_death" /> |
|
|
|
| 126 |
<xs:element ref="shared:year_of_death" /> |
|
|
|
| 127 |
</xs:sequence> |
|
|
|
| |
| 129 |
<xs:element ref="shared:days_to_death" /> |
+- |
|
|
| 130 |
</xs:choice> |
|
|
|
| |
| 132 |
<xs:element ref="shared:person_neoplasm_cancer_status" /> |
+- |
|
|
| 133 |
<xs:element ref="person_occupation_description_text" /> |
|
|
|
| 134 |
<xs:element ref="occupation_primary_job" /> |
|
|
|
| 135 |
<xs:element ref="chemical_exposure_text" /> |
|
|
|
| 136 |
<xs:element ref="person_primary_industry_text" /> |
|
|
|
| 137 |
<xs:element ref="person_occupation_years_number" /> |
|
|
|
| 138 |
<xs:element ref="tobacco_smoking_history_indicator" /> |
|
|
|
| 139 |
<xs:element ref="age_began_smoking_in_years" /> |
|
|
|
| 140 |
<xs:element ref="shared:stopped_smoking_year" /> |
|
|
|
| 141 |
<xs:element ref="shared:number_pack_years_smoked" /> |
|
|
|
| 142 |
<xs:element ref="blood_relative_cancer_history_list" /> |
|
|
|
| |
| 144 |
<xs:element ref="shared:tumor_histologic_subtype" /> |
+- |
|
|
| 145 |
<xs:element ref="diagnosis_subtype" /> |
|
|
|
| 146 |
<xs:element ref="bladder_tumor_histologic_who_2004_grade" /> |
|
|
|
| 147 |
<xs:element ref="shared:anatomic_organ_subdivision" /> |
|
|
|
| |
| |
|
-+ |
103 |
<xs:element ref="shared:radiation_therapy" /> |
| |
|
|
104 |
<xs:element ref="shared:additional_pharmaceutical_therapy" /> |
| |
| |
|
-+ |
106 |
<xs:choice> |
| |
|
|
107 |
<xs:sequence> |
| |
|
|
108 |
<xs:element ref="shared:day_of_death" /> |
| |
|
|
109 |
<xs:element ref="shared:month_of_death" /> |
| |
|
|
110 |
<xs:element ref="shared:year_of_death" /> |
| |
|
|
111 |
</xs:sequence> |
| |
| |
|
-+ |
113 |
<xs:element ref="shared:days_to_death" /> |
| |
|
|
114 |
</xs:choice> |
| |
| |
|
-+ |
116 |
<xs:choice> |
| |
|
|
117 |
<xs:sequence> |
| |
|
|
118 |
<xs:element ref="shared:day_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
119 |
<xs:element ref="shared:month_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
120 |
<xs:element ref="shared:year_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
121 |
</xs:sequence> |
| |
| |
|
-+ |
123 |
<xs:element ref="shared:days_to_new_tumor_event_after_initial_treatment" /> |
| |
|
|
124 |
</xs:choice> |
| |
| |
|
-+ |
126 |
<xs:element ref="shared:additional_surgery_locoregional_procedure" /> |
| |
| |
|
-+ |
128 |
<xs:choice> |
| |
|
|
129 |
<xs:sequence> |
| |
|
|
130 |
<xs:element ref="shared:day_of_additional_surgery_metastatic_procedure" /> |
| |
|
|
131 |
<xs:element ref="shared:month_of_additional_surgery_metastatic_procedure" /> |
| |
|
|
132 |
<xs:element ref="shared:year_of_additional_surgery_metastatic_procedure" /> |
| |
|
|
133 |
</xs:sequence> |
| |
| |
|
-+ |
135 |
<xs:element ref="shared:days_to_additional_surgery_metastatic_procedure" /> |
| |
|
|
136 |
</xs:choice> |
| |
| |
|
-+ |
138 |
<xs:element ref="shared:additional_radiation_therapy" /> |
| |
| |
|
-+ |
141 |
<xs:element ref="shared:bcr_patient_barcode" /> |
| |
|
|
142 |
<xs:element ref="shared:tissue_source_site" /> |
| |
|
|
143 |
<xs:element ref="shared:patient_id" /> |
| |
|
|
144 |
<xs:element ref="shared:bcr_patient_uuid" /> |
| |
|
|
145 |
<xs:element ref="shared:informed_consent_verified" /> |
| |
|
|
146 |
<xs:element ref="shared:icd_o_3_site" /> |
| |
|
|
147 |
<xs:element ref="shared:icd_o_3_histology" /> |
| |
|
|
148 |
<xs:element ref="shared:icd_10" /> |
| |
| |
|
-+ |
150 |
<xs:element ref="tissue_prospective_collection_indicator" /> |
| |
|
|
151 |
<xs:element ref="tissue_retrospective_collection_indicator" /> |
| |
|
|
152 |
<xs:element ref="person_occupation_description_text" /> |
| |
|
|
153 |
<xs:element ref="occupation_primary_job" /> |
| |
|
|
154 |
<xs:element ref="chemical_exposure_text" /> |
| |
|
|
155 |
<xs:element ref="person_primary_industry_text" /> |
| |
|
|
156 |
<xs:element ref="person_occupation_years_number" /> |
| |
|
|
157 |
<xs:element ref="patient_smoking_history_category" /> |
| |
|
|
158 |
<xs:element ref="age_began_smoking_in_years" /> |
| |
|
|
159 |
<xs:element ref="stopped_smoking_year" /> |
| |
|
|
160 |
<xs:element ref="person_cigarette_smoking_history_pack_year_value" /> |
| |
|
|
161 |
<xs:element ref="blood_relative_cancer_history_list" /> |
| |
|
|
162 |
<xs:element ref="tumor_histologic_subtype_type" /> |
| |
|
|
163 |
<xs:element ref="specimen_histologic_type_type_histologictype" /> |
| |
|
|
164 |
<xs:element ref="bladder_tumor_histologic_who_2004_grade" /> |
| |
|
|
165 |
<xs:element ref="anatomic_site_location_descriptor" /> |
| |
| 165 |
<xs:element ref="shared:primary_lymph_node_presentation_assessment"> |
+- |
|
|
| 166 |
<xs:annotation> |
|
|
|
| 167 |
<xs:documentation xml:lang="en"> |
|
|
|
| 168 |
This item was first introduced in version 2.04 of the TCGA Clinical Data Form |
|
|
|
| 169 |
</xs:documentation> |
|
|
|
| 170 |
</xs:annotation> |
|
|
|
| 171 |
</xs:element> |
|
|
|
| |
| 173 |
<xs:element ref="shared:lymph_node_examined_count" /> |
<> |
168 |
<xs:element ref="lymph_node_examined_count" /> |
| 174 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_he" /> |
|
169 |
<xs:element ref="positive_finding_lymph_node_hematoxylin_and_eosin_staining_microscopy_count" /> |
| |
| 177 |
<xs:element ref="shared:lymphovascular_invasion_present" /> |
<> |
172 |
<xs:element ref="tumor_lymphovascular_invasion_ind" /> |
| |
| 179 |
<xs:element ref="shared:ajcc_cancer_staging_handbook_edition" minOccurs="0" maxOccurs="1"> |
<> |
173 |
<xs:element ref="shared:ajcc_cancer_staging_handbook_edition" minOccurs="0" maxOccurs="1" /> |
| 180 |
<xs:annotation> |
|
|
|
| 181 |
<xs:documentation xml:lang="en"> |
|
|
|
| 182 |
This item was first introduced in version 2.04 of the TCGA Clinical Data Form |
|
|
|
| 183 |
</xs:documentation> |
|
|
|
| 184 |
</xs:annotation> |
|
|
|
| 185 |
</xs:element> |
|
|
|
| |
| 188 |
<xs:element ref="shared:ajcc_tumor_stage_code" /> |
<> |
175 |
<xs:element ref="bladder_carcinoma_pathologic_t_stage" /> |
| 189 |
<xs:element ref="shared:ajcc_neoplasm_disease_lymph_node_stage" /> |
|
176 |
<xs:element ref="bladder_carcinoma_pathologic_n_stage" /> |
| 190 |
<xs:element ref="shared:ajcc_cancer_metastasis_stage_code" /> |
|
177 |
<xs:element ref="bladder_carcinoma_pathologic_m_stage" /> |
| 191 |
<xs:element ref="malignant_neoplasm_metastatic_involvement_sites" /> |
|
178 |
<xs:element ref="bladder_malignant_neoplasm_metastatic_involvement_sites" /> |
| 192 |
<xs:element ref="other_metastatic_involvement_anatomic_site" /> |
|
179 |
<xs:element ref="bladder_carcinoma_other_metastatic_involvement_anatomic_site_text" /> |
| 193 |
<xs:element ref="shared:ajcc_neoplasm_disease_stage" /> |
|
180 |
<xs:element ref="bladder_carcinoma_clinical_stage" /> |
| |
| 197 |
<xs:element ref="shared:karnofsky_performance_score" /> |
<> |
184 |
<xs:element ref="karnofsky_performance_status_score" /> |
| 198 |
<xs:element ref="shared:eastern_cancer_oncology_group" /> |
|
185 |
<xs:element ref="performance_status_assessment_eastern_cooperative_oncology_group_scale" /> |
| |
| 200 |
<xs:element ref="follow_ups" /> |
<> |
|
|
| 201 |
<xs:element ref="rx:drugs" /> |
|
|
|
| 202 |
<xs:element ref="rad:radiations" /> |
|
186 |
<xs:element ref="primary_therapy_outcome_success_type" /> |
| 203 |
<xs:element ref="clinical_cqcf" /> |
|
|
|
| 204 |
</xs:sequence> |
|
|
|
| 205 |
</xs:complexType> |
|
|
|
| 206 |
</xs:element> |
|
|
|
| |
| 208 |
<xs:element name="follow_ups"> |
<> |
187 |
<xs:element ref="new_neoplasm_event_type" /> |
| 209 |
<xs:annotation> |
|
|
|
| 210 |
<xs:documentation xml:lang="en"> |
|
|
|
| 211 |
We are using namespaces and version numbers to distinguish one version of followup from another. |
|
|
|
| 212 |
</xs:documentation> |
|
|
|
| 213 |
</xs:annotation> |
|
|
|
| 214 |
<xs:complexType> |
|
|
|
| 215 |
<xs:sequence> |
|
|
|
| 216 |
<xs:element ref="follow_up_v2.0:follow_up_v2.0" minOccurs="0" maxOccurs="unbounded" /> |
|
188 |
<xs:element ref="new_neoplasm_event_occurrence_anatomic_site" /> |
| 217 |
</xs:sequence> |
|
|
|
| 218 |
</xs:complexType> |
|
|
|
| 219 |
</xs:element> |
|
|
|
| |
| 221 |
<xs:element name="clinical_cqcf"> |
<> |
|
|
| 222 |
<xs:complexType> |
|
|
|
| 223 |
<xs:sequence> |
|
|
|
| 224 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
|
189 |
<xs:element ref="new_neoplasm_occurrence_anatomic_site_text" /> |
| 225 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
190 |
<xs:element ref="additional_treatment_completion_success_outcome_type" /> |
| |
| 228 |
<xs:choice> |
+- |
|
|
| |
| 230 |
<xs:element ref="cqcf:day_of_consent"/> |
<> |
194 |
<xs:element ref="shared:day_of_form_completion" /> |
| 231 |
<xs:element ref="cqcf:month_of_consent"/> |
|
195 |
<xs:element ref="shared:month_of_form_completion" /> |
| 232 |
<xs:element ref="cqcf:year_of_consent"/> |
|
196 |
<xs:element ref="shared:year_of_form_completion" /> |
| |
| 235 |
<xs:element ref="cqcf:days_to_consent"/> |
+- |
|
|
| 236 |
</xs:choice> |
|
|
|
| |
| 238 |
<xs:choice> |
<> |
|
|
| 239 |
<xs:sequence> |
|
|
|
| 240 |
<xs:element ref="shared:day_of_death"/> |
|
|
|
| 241 |
<xs:element ref="shared:month_of_death"/> |
|
199 |
<xs:element ref="shared:days_to_form_completion" /> |
| 242 |
<xs:element ref="shared:year_of_death"/> |
|
|
|
| 243 |
</xs:sequence> |
|
|
|
| |
| 245 |
<xs:element ref="shared:days_to_death"/> |
+- |
|
|
| 246 |
</xs:choice> |
|
|
|
| |
| 249 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
<> |
202 |
<xs:element ref="rx:drugs" /> |
| 250 |
<xs:element ref="shared:prior_diagnosis"/> |
|
203 |
<xs:element ref="rad:radiations" /> |
| 251 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
|
|
| 252 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
|
|
|
| 253 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
|
|
| 254 |
<xs:element ref="cqcf:tumor_focality"/> |
|
|
|
| 255 |
<xs:element ref="cqcf:tumor_type"/> |
|
|
|
| 256 |
<xs:element ref="cqcf:other_diagnosis"/> |
|
|
|
| 257 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
|
|
| 258 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
|
|
|
| 259 |
<xs:element ref="cqcf:country"/> |
|
|
|
| |
| 345 |
<xs:extension base="utility:number_or_null"> |
<> |
289 |
<xs:extension base="xs:decimal"> |
| |
| 355 |
<xs:element name="tobacco_smoking_history_indicator" nillable="true"> |
<> |
299 |
<xs:element name="patient_smoking_history_category" nillable="true"> |
| |
| 375 |
<xs:extension base="utility:number_or_null"> |
<> |
319 |
<xs:extension base="xs:decimal"> |
| |
| |
|
-+ |
329 |
<xs:element name="stopped_smoking_year" nillable="true"> |
| |
|
|
330 |
<xs:complexType> |
| |
|
|
331 |
<xs:simpleContent> |
| |
|
|
332 |
<xs:extension base="xs:decimal"> |
| |
|
|
333 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
334 |
<xs:attribute name="cde" type="xs:string" default="2228610" /> |
| |
|
|
335 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
336 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
337 |
</xs:extension> |
| |
|
|
338 |
</xs:simpleContent> |
| |
|
|
339 |
</xs:complexType> |
| |
|
|
340 |
</xs:element> |
| |
| |
|
-+ |
342 |
<xs:element name="person_cigarette_smoking_history_pack_year_value" nillable="true"> |
| |
|
|
343 |
<xs:complexType> |
| |
|
|
344 |
<xs:simpleContent> |
| |
|
|
345 |
<xs:extension base="xs:decimal"> |
| |
|
|
346 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
347 |
<xs:attribute name="cde" type="xs:string" default="2955385" /> |
| |
|
|
348 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
349 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
350 |
</xs:extension> |
| |
|
|
351 |
</xs:simpleContent> |
| |
|
|
352 |
</xs:complexType> |
| |
|
|
353 |
</xs:element> |
| |
| 407 |
<xs:enumeration value="Brother" /> |
<> |
377 |
<xs:enumeration value="Mother" /> |
| 408 |
<xs:enumeration value="Child" /> |
|
|
|
| |
| 410 |
<xs:enumeration value="Grandfather" /> |
+- |
|
|
| |
| |
|
<> |
380 |
<xs:enumeration value="Grandfather" /> |
| 412 |
<xs:enumeration value="Mother" /> |
|
381 |
<xs:enumeration value="Brother" /> |
| |
| |
|
-+ |
383 |
<xs:enumeration value="Child" /> |
| |
| |
|
-+ |
399 |
<xs:enumeration value="CNS" /> |
| |
|
|
400 |
<xs:enumeration value="CNS-Glioblastoma" /> |
| |
|
|
401 |
<xs:enumeration value="CNS-Medulloblastoma" /> |
| |
| |
|
-+ |
404 |
<xs:enumeration value="Breast-LCIS" /> |
| |
|
|
405 |
<xs:enumeration value="Breast-DCIS" /> |
| |
| |
|
<> |
408 |
<xs:enumeration value="Cervix-Squamous Cell Carcinoma" /> |
| 433 |
<xs:enumeration value="CNS" /> |
|
409 |
<xs:enumeration value="Cervix-Adenocarcinoma" /> |
| |
| 442 |
<xs:enumeration value="Head/Face/Neck" /> |
<> |
418 |
<xs:enumeration value="HeadFaceNeck" /> |
| |
| |
|
-+ |
423 |
<xs:enumeration value="Leukemia-acute lymphocytic leukemia" /> |
| |
|
|
424 |
<xs:enumeration value="Leukemia-acute monocytic leukemia" /> |
| |
|
|
425 |
<xs:enumeration value="Leukemia-chronic lymphocytic leukemia" /> |
| |
|
|
426 |
<xs:enumeration value="Leukemia-chronic monocytic leukemia" /> |
| |
|
|
427 |
<xs:enumeration value="Leukemia-hairy cell leukemia" /> |
| |
| |
|
-+ |
439 |
<xs:enumeration value="Ovary-Germ Cell" /> |
| |
|
|
440 |
<xs:enumeration value="Ovary-Epithelial" /> |
| |
|
|
441 |
<xs:enumeration value="Ovary-Stromal" /> |
| |
| 465 |
<xs:enumeration value="Skin-Basal Cell Carcinoma" /> |
<> |
449 |
<xs:enumeration value="Sarcoma-Ewings" /> |
| |
|
|
450 |
<xs:enumeration value="Sarcoma-Osteo" /> |
| |
|
|
451 |
<xs:enumeration value="Skin-NOS" /> |
| |
| |
|
-+ |
453 |
<xs:enumeration value="Skin-Basal Cell Carcinoma" /> |
| |
| |
|
-+ |
457 |
<xs:enumeration value="Thyroid-Follicular" /> |
| |
|
|
458 |
<xs:enumeration value="Thyroid-Medullary" /> |
| |
|
|
459 |
<xs:enumeration value="Thyroid-Papillary" /> |
| |
| |
|
-+ |
461 |
<xs:enumeration value="Uterine-Papillary" /> |
| |
|
|
462 |
<xs:enumeration value="Uterine-Serous" /> |
| |
|
|
463 |
<xs:enumeration value="Uterine-PapillarySerous" /> |
| |
| |
|
-+ |
475 |
<xs:element name="tumor_histologic_subtype_type" nillable="true"> |
| |
|
|
476 |
<xs:complexType mixed="true"> |
| |
|
|
477 |
<xs:simpleContent> |
| |
|
|
478 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
479 |
<xs:enumeration value="" /> |
| |
|
|
480 |
<xs:enumeration value="Papillary renal cell carcinoma" /> |
| |
|
|
481 |
<xs:enumeration value="Squamous cell carcinoma" /> |
| |
|
|
482 |
<xs:enumeration value="Adenocarcinoma" /> |
| |
|
|
483 |
<xs:enumeration value="Cystadenocarcinoma" /> |
| |
|
|
484 |
<xs:enumeration value="Glioblastoma multiforme" /> |
| |
|
|
485 |
<xs:enumeration value="Mixed Histology" /> |
| |
|
|
486 |
<xs:enumeration value="Infiltrating Lobular" /> |
| |
|
|
487 |
<xs:enumeration value="Infiltrating Carcinoma NOS" /> |
| |
|
|
488 |
<xs:enumeration value="Muscle invasive urothelial carcinoma" /> |
| |
|
|
489 |
<xs:attribute name="cde" type="xs:string" default="2831122" /> |
| |
|
|
490 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
491 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
492 |
</xs:restriction> |
| |
|
|
493 |
</xs:simpleContent> |
| |
|
|
494 |
</xs:complexType> |
| |
|
|
495 |
</xs:element> |
| |
| 482 |
<xs:element name="diagnosis_subtype" nillable="true"> |
<> |
497 |
<xs:element name="specimen_histologic_type_type_histologictype" nillable="true"> |
| |
| 487 |
<xs:enumeration value="Non-Papillary" /> |
+- |
|
|
| |
| |
|
-+ |
503 |
<xs:enumeration value="Non-Papillary" /> |
| |
| 504 |
<xs:enumeration value="Papilloma" /> |
+- |
|
|
| |
| |
|
-+ |
520 |
<xs:enumeration value="Papilloma" /> |
| |
| |
|
-+ |
524 |
</xs:restriction> |
| |
|
|
525 |
</xs:simpleContent> |
| |
|
|
526 |
</xs:complexType> |
| |
|
|
527 |
</xs:element> |
| |
| |
|
-+ |
529 |
<xs:element name="anatomic_site_location_descriptor" nillable="true"> |
| |
|
|
530 |
<xs:complexType mixed="true"> |
| |
|
|
531 |
<xs:simpleContent> |
| |
|
|
532 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
533 |
<xs:enumeration value="" /> |
| |
|
|
534 |
<xs:enumeration value="Bladder, NOS" /> |
| |
|
|
535 |
<xs:enumeration value="Wall, Lateral" /> |
| |
|
|
536 |
<xs:enumeration value="Wall, Anterior" /> |
| |
|
|
537 |
<xs:enumeration value="Wall, NOS" /> |
| |
|
|
538 |
<xs:enumeration value="Wall, Posterior" /> |
| |
|
|
539 |
<xs:enumeration value="Trigone" /> |
| |
|
|
540 |
<xs:enumeration value="Neck" /> |
| |
|
|
541 |
<xs:enumeration value="Dome" /> |
| |
|
|
542 |
<xs:attribute name="cde" type="xs:string" default="2008006" /> |
| |
|
|
543 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
544 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
| |
|
-+ |
558 |
</xs:extension> |
| |
|
|
559 |
</xs:simpleContent> |
| |
|
|
560 |
</xs:complexType> |
| |
|
|
561 |
</xs:element> |
| |
| |
|
-+ |
563 |
<xs:element name="lymph_node_examined_count" nillable="true"> |
| |
|
|
564 |
<xs:complexType> |
| |
|
|
565 |
<xs:simpleContent> |
| |
|
|
566 |
<xs:extension base="xs:integer"> |
| |
|
|
567 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
568 |
<xs:attribute name="cde" type="xs:string" default="3" /> |
| |
|
|
569 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
570 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
571 |
</xs:extension> |
| |
|
|
572 |
</xs:simpleContent> |
| |
|
|
573 |
</xs:complexType> |
| |
|
|
574 |
</xs:element> |
| |
| |
|
-+ |
576 |
<xs:element name="positive_finding_lymph_node_hematoxylin_and_eosin_staining_microscopy_count" nillable="true"> |
| |
|
|
577 |
<xs:complexType> |
| |
|
|
578 |
<xs:simpleContent> |
| |
|
|
579 |
<xs:extension base="xs:integer"> |
| |
|
|
580 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
581 |
<xs:attribute name="cde" type="xs:string" default="3086388" /> |
| |
|
|
582 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
583 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
| |
|
-+ |
607 |
<xs:enumeration value="Unknown" /> |
| |
| 547 |
<xs:enumeration value="Unknown" /> |
+- |
|
|
| |
| |
|
-+ |
614 |
</xs:simpleContent> |
| |
|
|
615 |
</xs:complexType> |
| |
|
|
616 |
</xs:element> |
| |
| |
|
-+ |
618 |
<xs:element name="tumor_lymphovascular_invasion_ind" nillable="true"> |
| |
|
|
619 |
<xs:complexType mixed="true"> |
| |
|
|
620 |
<xs:simpleContent> |
| |
|
|
621 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
622 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
623 |
<xs:attribute name="cde" type="xs:string" default="64727" /> |
| |
|
|
624 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
625 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
626 |
</xs:extension> |
| |
| 561 |
<xs:enumeration value="cT0" /> |
<> |
636 |
<xs:enumeration value="cT4" /> |
| 562 |
<xs:enumeration value="cT1" /> |
|
637 |
<xs:enumeration value="T4b" /> |
| 563 |
<xs:enumeration value="cT2" /> |
|
638 |
<xs:enumeration value="pT3b" /> |
| |
|
|
639 |
<xs:enumeration value="pT3a" /> |
| |
| |
|
<> |
641 |
<xs:enumeration value="pT2b" /> |
| |
|
|
642 |
<xs:enumeration value="pT2a" /> |
| 565 |
<xs:enumeration value="cT4" /> |
|
643 |
<xs:enumeration value="cT2" /> |
| 566 |
<xs:enumeration value="cT4a" /> |
|
644 |
<xs:enumeration value="cT1" /> |
| |
|
|
645 |
<xs:enumeration value="cTis" /> |
| |
| 568 |
<xs:enumeration value="cTis" /> |
<> |
647 |
<xs:enumeration value="cT0" /> |
| |
| 570 |
<xs:enumeration value="pT2a" /> |
<> |
|
|
| 571 |
<xs:enumeration value="pT2b" /> |
|
|
|
| 572 |
<xs:enumeration value="pT3a" /> |
|
|
|
| 573 |
<xs:enumeration value="pT3b" /> |
|
|
|
| 574 |
<xs:enumeration value="T4b" /> |
|
649 |
<xs:enumeration value="cT4a" /> |
| |
| |
|
-+ |
658 |
<xs:element name="bladder_carcinoma_pathologic_t_stage" nillable="true"> |
| |
|
|
659 |
<xs:annotation><xs:documentation> |
| |
|
|
660 |
The following enumerated values have been DEPRECATED and will be removed in veresion 2.5 of the XSDs. |
| |
| |
|
-+ |
662 |
pT0, pT1, pT2, pT3, pT4, pTa, pTis, pTX, pT2a, pT2b, pT3a, pT3b, T4b, pT4a |
| |
| |
|
-+ |
664 |
</xs:documentation></xs:annotation> |
| |
|
|
665 |
<xs:complexType mixed="true"> |
| |
|
|
666 |
<xs:simpleContent> |
| |
|
|
667 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
668 |
<xs:enumeration value="" /> |
| |
|
|
669 |
<xs:enumeration value="TX" /> |
| |
|
|
670 |
<xs:enumeration value="T0" /> |
| |
|
|
671 |
<xs:enumeration value="Tis" /> |
| |
|
|
672 |
<xs:enumeration value="Tis (DCIS)" /> |
| |
|
|
673 |
<xs:enumeration value="Tis (LCIS)" /> |
| |
|
|
674 |
<xs:enumeration value="Tis (Paget's)" /> |
| |
|
|
675 |
<xs:enumeration value="T1mi" /> |
| |
|
|
676 |
<xs:enumeration value="T1" /> |
| |
|
|
677 |
<xs:enumeration value="T1a" /> |
| |
|
|
678 |
<xs:enumeration value="T1b" /> |
| |
|
|
679 |
<xs:enumeration value="T1c" /> |
| |
|
|
680 |
<xs:enumeration value="T2" /> |
| |
|
|
681 |
<xs:enumeration value="T2a" /> |
| |
|
|
682 |
<xs:enumeration value="T2b" /> |
| |
|
|
683 |
<xs:enumeration value="T2c" /> |
| |
|
|
684 |
<xs:enumeration value="Ta" /> |
| |
|
|
685 |
<xs:enumeration value="T3" /> |
| |
|
|
686 |
<xs:enumeration value="T3a" /> |
| |
|
|
687 |
<xs:enumeration value="T3b" /> |
| |
|
|
688 |
<xs:enumeration value="T3c" /> |
| |
|
|
689 |
<xs:enumeration value="T4" /> |
| |
|
|
690 |
<xs:enumeration value="T4a" /> |
| |
|
|
691 |
<xs:enumeration value="T4b" /> |
| |
|
|
692 |
<xs:enumeration value="T4c" /> |
| |
|
|
693 |
<xs:enumeration value="T4d" /> |
| |
|
|
694 |
<xs:enumeration value="pT0" /> |
| |
|
|
695 |
<xs:enumeration value="pT1" /> |
| |
|
|
696 |
<xs:enumeration value="pT2" /> |
| |
|
|
697 |
<xs:enumeration value="pT3" /> |
| |
|
|
698 |
<xs:enumeration value="pT4" /> |
| |
|
|
699 |
<xs:enumeration value="pTa" /> |
| |
|
|
700 |
<xs:enumeration value="pTis" /> |
| |
|
|
701 |
<xs:enumeration value="pTX" /> |
| |
|
|
702 |
<xs:enumeration value="pT2a" /> |
| |
|
|
703 |
<xs:enumeration value="pT2b" /> |
| |
|
|
704 |
<xs:enumeration value="pT3a" /> |
| |
|
|
705 |
<xs:enumeration value="pT3b" /> |
| |
|
|
706 |
<xs:enumeration value="T4b" /> |
| |
|
|
707 |
<xs:enumeration value="pT4a" /> |
| |
|
|
708 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
709 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4.1" /> |
| |
|
|
710 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
711 |
</xs:restriction> |
| |
|
|
712 |
</xs:simpleContent> |
| |
|
|
713 |
</xs:complexType> |
| |
|
|
714 |
</xs:element> |
| |
| |
|
-+ |
716 |
<xs:element name="bladder_carcinoma_pathologic_n_stage" nillable="true"> |
| |
|
|
717 |
<xs:annotation><xs:documentation> |
| |
|
|
718 |
The following enumerated values have been DEPRECATED and will be removed in veresion 2.5 of the XSDs. |
| |
| |
|
-+ |
720 |
pN3, pN2, pN1, pN0, pNX |
| |
| |
|
-+ |
722 |
</xs:documentation></xs:annotation> |
| |
|
|
723 |
<xs:complexType mixed="true"> |
| |
|
|
724 |
<xs:simpleContent> |
| |
|
|
725 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
726 |
<xs:enumeration value="" /> |
| |
|
|
727 |
<xs:enumeration value="NX" /> |
| |
|
|
728 |
<xs:enumeration value="N0" /> |
| |
|
|
729 |
<xs:enumeration value="N0 (i-)" /> |
| |
|
|
730 |
<xs:enumeration value="N0 (i+)" /> |
| |
|
|
731 |
<xs:enumeration value="N0 (mol-)" /> |
| |
|
|
732 |
<xs:enumeration value="N0 (mol+)" /> |
| |
|
|
733 |
<xs:enumeration value="N1" /> |
| |
|
|
734 |
<xs:enumeration value="N1mi" /> |
| |
|
|
735 |
<xs:enumeration value="N1a" /> |
| |
|
|
736 |
<xs:enumeration value="N1b" /> |
| |
|
|
737 |
<xs:enumeration value="N1bI" /> |
| |
|
|
738 |
<xs:enumeration value="N1bII" /> |
| |
|
|
739 |
<xs:enumeration value="N1bIII" /> |
| |
|
|
740 |
<xs:enumeration value="N1bIV" /> |
| |
|
|
741 |
<xs:enumeration value="N1c" /> |
| |
|
|
742 |
<xs:enumeration value="N2" /> |
| |
|
|
743 |
<xs:enumeration value="N2a" /> |
| |
|
|
744 |
<xs:enumeration value="N2b" /> |
| |
|
|
745 |
<xs:enumeration value="N3" /> |
| |
|
|
746 |
<xs:enumeration value="N3a" /> |
| |
|
|
747 |
<xs:enumeration value="N3b" /> |
| |
|
|
748 |
<xs:enumeration value="N3c" /> |
| |
|
|
749 |
<xs:enumeration value="N4" /> |
| |
|
|
750 |
<xs:enumeration value="pN3" /> |
| |
|
|
751 |
<xs:enumeration value="pN2" /> |
| |
|
|
752 |
<xs:enumeration value="pN1" /> |
| |
|
|
753 |
<xs:enumeration value="pN0" /> |
| |
|
|
754 |
<xs:enumeration value="pNX" /> |
| |
|
|
755 |
<xs:attribute name="cde" type="xs:string" default="3203106" /> |
| |
|
|
756 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4.1" /> |
| |
|
|
757 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
758 |
</xs:restriction> |
| |
|
|
759 |
</xs:simpleContent> |
| |
|
|
760 |
</xs:complexType> |
| |
|
|
761 |
</xs:element> |
| |
| |
|
-+ |
763 |
<xs:element name="bladder_carcinoma_pathologic_m_stage" nillable="true"> |
| |
|
|
764 |
<xs:complexType mixed="true"> |
| |
|
|
765 |
<xs:simpleContent> |
| |
|
|
766 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
767 |
<xs:enumeration value="" /> |
| |
|
|
768 |
<xs:enumeration value="MX" /> |
| |
|
|
769 |
<xs:enumeration value="M0" /> |
| |
|
|
770 |
<xs:enumeration value="M1" /> |
| |
|
|
771 |
<xs:enumeration value="M1a" /> |
| |
|
|
772 |
<xs:enumeration value="M1b" /> |
| |
|
|
773 |
<xs:enumeration value="M1c" /> |
| |
|
|
774 |
<xs:enumeration value="cM0 (i+)" /> |
| |
|
|
775 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
776 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4.1" /> |
| |
|
|
777 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
778 |
</xs:restriction> |
| |
|
|
779 |
</xs:simpleContent> |
| |
|
|
780 |
</xs:complexType> |
| |
|
|
781 |
</xs:element> |
| |
| 583 |
<xs:element name="malignant_neoplasm_metastatic_involvement_sites"> |
<> |
783 |
<xs:element name="bladder_malignant_neoplasm_metastatic_involvement_sites"> |
| |
| 586 |
<xs:element ref="malignant_neoplasm_metastatic_involvement_site" minOccurs="0" maxOccurs="unbounded" /> |
<> |
786 |
<xs:element ref="bladder_malignant_neoplasm_metastatic_involvement_site" minOccurs="0" maxOccurs="unbounded" /> |
| |
| 591 |
<xs:element name="malignant_neoplasm_metastatic_involvement_site" nillable="true"> |
<> |
791 |
<xs:element name="bladder_malignant_neoplasm_metastatic_involvement_site" nillable="true"> |
| |
| |
|
-+ |
796 |
<xs:enumeration value="Nodal/soft tissue" /> |
| |
|
|
797 |
<xs:enumeration value="Spleen" /> |
| |
| |
|
-+ |
799 |
<xs:enumeration value="Lung/pleura" /> |
| |
| 602 |
<xs:enumeration value="Liver" /> |
+- |
|
|
| 603 |
<xs:enumeration value="Lung" /> |
|
|
|
| 604 |
<xs:enumeration value="Lung/pleura" /> |
|
|
|
| 605 |
<xs:enumeration value="Lymph node only" /> |
|
|
|
| 606 |
<xs:enumeration value="Nodal/soft tissue" /> |
|
|
|
| |
| 611 |
<xs:enumeration value="Spleen" /> |
<> |
809 |
<xs:enumeration value="Lung" /> |
| |
|
|
810 |
<xs:enumeration value="Liver" /> |
| |
|
|
811 |
<xs:enumeration value="Lymph node only" /> |
| |
| 620 |
<xs:element name="other_metastatic_involvement_anatomic_site" nillable="true"> |
<> |
820 |
<xs:element name="bladder_carcinoma_other_metastatic_involvement_anatomic_site_text" nillable="true"> |
| |
| |
|
-+ |
833 |
<xs:element name="bladder_carcinoma_clinical_stage" nillable="true"> |
| |
|
|
834 |
<xs:annotation><xs:documentation> |
| |
|
|
835 |
The following enumerated values have been DEPRECATED and will be removed in veresion 2.5 of the XSDs. |
| |
| |
|
-+ |
837 |
Stage Unknown |
| |
| |
|
-+ |
839 |
</xs:documentation></xs:annotation> |
| |
|
|
840 |
<xs:complexType mixed="true"> |
| |
|
|
841 |
<xs:simpleContent> |
| |
|
|
842 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
843 |
<xs:enumeration value="" /> |
| |
|
|
844 |
<xs:enumeration value="Stage X" /> |
| |
|
|
845 |
<xs:enumeration value="Stage Tis" /> |
| |
|
|
846 |
<xs:enumeration value="Stage 0" /> |
| |
|
|
847 |
<xs:enumeration value="Stage I" /> |
| |
|
|
848 |
<xs:enumeration value="Stage IA" /> |
| |
|
|
849 |
<xs:enumeration value="Stage IB" /> |
| |
|
|
850 |
<xs:enumeration value="Stage II" /> |
| |
|
|
851 |
<xs:enumeration value="Stage IIA" /> |
| |
|
|
852 |
<xs:enumeration value="Stage IIB" /> |
| |
|
|
853 |
<xs:enumeration value="Stage IIC" /> |
| |
|
|
854 |
<xs:enumeration value="Stage III" /> |
| |
|
|
855 |
<xs:enumeration value="Stage IIIA" /> |
| |
|
|
856 |
<xs:enumeration value="Stage IIIB" /> |
| |
|
|
857 |
<xs:enumeration value="Stage IIIC" /> |
| |
|
|
858 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
859 |
<xs:enumeration value="Stage IVA" /> |
| |
|
|
860 |
<xs:enumeration value="Stage IVB" /> |
| |
|
|
861 |
<xs:enumeration value="Stage IIA Cervix" /> |
| |
|
|
862 |
<xs:enumeration value="Stage II Cervix" /> |
| |
|
|
863 |
<xs:enumeration value="Stage IB2" /> |
| |
|
|
864 |
<xs:enumeration value="Stage IB1" /> |
| |
|
|
865 |
<xs:enumeration value="Stage IB Cervix" /> |
| |
|
|
866 |
<xs:enumeration value="Stage IA2" /> |
| |
|
|
867 |
<xs:enumeration value="Stage IA1" /> |
| |
|
|
868 |
<xs:enumeration value="Stage IVC" /> |
| |
|
|
869 |
<xs:enumeration value="Stage 0is" /> |
| |
|
|
870 |
<xs:enumeration value="Stage 0a" /> |
| |
|
|
871 |
<xs:enumeration value="Stage Unknown" /> |
| |
|
|
872 |
<xs:attribute name="cde" type="xs:string" default="3203222" /> |
| |
|
|
873 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4.1" /> |
| |
|
|
874 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
875 |
</xs:restriction> |
| |
|
|
876 |
</xs:simpleContent> |
| |
|
|
877 |
</xs:complexType> |
| |
|
|
878 |
</xs:element> |
| |
| 647 |
<xs:annotation> |
+- |
|
|
| 648 |
<xs:documentation> |
|
|
|
| 649 |
The following enumerated values have been DEPRECATED. |
|
|
|
| |
| 651 |
pT1, pT1a, pT1b, pT1c |
+- |
|
|
| 652 |
</xs:documentation> |
|
|
|
| 653 |
</xs:annotation> |
|
|
|
| |
| 658 |
<xs:enumeration value="pT0" /> |
<> |
898 |
<xs:enumeration value="pT4" /> |
| 659 |
<xs:enumeration value="pT2" /> |
|
899 |
<xs:enumeration value="pT3b" /> |
| 660 |
<xs:enumeration value="pT2a" /> |
|
900 |
<xs:enumeration value="pT3a" /> |
| 661 |
<xs:enumeration value="pT2b" /> |
|
901 |
<xs:enumeration value="pT3" /> |
| |
| 663 |
<xs:enumeration value="pT3" /> |
<> |
903 |
<xs:enumeration value="pT2b" /> |
| 664 |
<xs:enumeration value="pT3a" /> |
|
904 |
<xs:enumeration value="pT2a" /> |
| 665 |
<xs:enumeration value="pT3b" /> |
|
905 |
<xs:enumeration value="pT2" /> |
| 666 |
<xs:enumeration value="pT4" /> |
|
906 |
<xs:enumeration value="pT0" /> |
| |
| |
|
-+ |
908 |
<xs:enumeration value="pT1" /> |
| |
|
|
909 |
<xs:enumeration value="pT1a" /> |
| |
|
|
910 |
<xs:enumeration value="pT1b" /> |
| |
|
|
911 |
<xs:enumeration value="pT1c" /> |
| |
| |
|
-+ |
942 |
<xs:element name="karnofsky_performance_status_score" nillable="true"> |
| |
|
|
943 |
<xs:complexType mixed="true"> |
| |
|
|
944 |
<xs:simpleContent> |
| |
|
|
945 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
946 |
<xs:enumeration value="" /> |
| |
|
|
947 |
<xs:enumeration value="100" /> |
| |
|
|
948 |
<xs:enumeration value="90" /> |
| |
|
|
949 |
<xs:enumeration value="80" /> |
| |
|
|
950 |
<xs:enumeration value="70" /> |
| |
|
|
951 |
<xs:enumeration value="60" /> |
| |
|
|
952 |
<xs:enumeration value="50" /> |
| |
|
|
953 |
<xs:enumeration value="40" /> |
| |
|
|
954 |
<xs:enumeration value="30" /> |
| |
|
|
955 |
<xs:enumeration value="20" /> |
| |
|
|
956 |
<xs:enumeration value="10" /> |
| |
|
|
957 |
<xs:enumeration value="0" /> |
| |
|
|
958 |
<xs:attribute name="cde" type="xs:string" default="2003853" /> |
| |
|
|
959 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
960 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
961 |
</xs:restriction> |
| |
|
|
962 |
</xs:simpleContent> |
| |
|
|
963 |
</xs:complexType> |
| |
|
|
964 |
</xs:element> |
| |
| |
|
-+ |
966 |
<xs:element name="performance_status_assessment_eastern_cooperative_oncology_group_scale" nillable="true"> |
| |
|
|
967 |
<xs:complexType mixed="true"> |
| |
|
|
968 |
<xs:simpleContent> |
| |
|
|
969 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
970 |
<xs:enumeration value="" /> |
| |
|
|
971 |
<xs:enumeration value="0" /> |
| |
|
|
972 |
<xs:enumeration value="1" /> |
| |
|
|
973 |
<xs:enumeration value="2" /> |
| |
|
|
974 |
<xs:enumeration value="3" /> |
| |
|
|
975 |
<xs:enumeration value="4" /> |
| |
|
|
976 |
<xs:enumeration value="5" /> |
| |
|
|
977 |
<xs:attribute name="cde" type="xs:string" default="88" /> |
| |
|
|
978 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
979 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
980 |
</xs:restriction> |
| |
|
|
981 |
</xs:simpleContent> |
| |
|
|
982 |
</xs:complexType> |
| |
|
|
983 |
</xs:element> |
| |
| |
|
-+ |
985 |
<xs:element name="primary_therapy_outcome_success_type" nillable="true"> |
| |
|
|
986 |
<xs:complexType mixed="true"> |
| |
|
|
987 |
<xs:simpleContent> |
| |
|
|
988 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
989 |
<xs:enumeration value="" /> |
| |
|
|
990 |
<xs:enumeration value="Progressive Disease" /> |
| |
|
|
991 |
<xs:enumeration value="Stable Disease" /> |
| |
|
|
992 |
<xs:enumeration value="Partial Response" /> |
| |
|
|
993 |
<xs:enumeration value="Complete Remission/Response" /> |
| |
|
|
994 |
<xs:enumeration value="Not Applicable" /> |
| |
|
|
995 |
<xs:attribute name="cde" type="xs:string" default="2786727" /> |
| |
|
|
996 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
997 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
998 |
</xs:restriction> |
| |
|
|
999 |
</xs:simpleContent> |
| |
|
|
1000 |
</xs:complexType> |
| |
|
|
1001 |
</xs:element> |
| |
| |
|
-+ |
1003 |
<xs:element name="new_neoplasm_event_type" nillable="true"> |
| |
|
|
1004 |
<xs:complexType mixed="true"> |
| |
|
|
1005 |
<xs:simpleContent> |
| |
|
|
1006 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1007 |
<xs:enumeration value="" /> |
| |
|
|
1008 |
<xs:enumeration value="Locoregional Disease" /> |
| |
|
|
1009 |
<xs:enumeration value="New Primary Tumor" /> |
| |
|
|
1010 |
<xs:enumeration value="Metastatic" /> |
| |
|
|
1011 |
<xs:enumeration value="Not Applicable" /> |
| |
|
|
1012 |
<xs:attribute name="cde" type="xs:string" default="3119721" /> |
| |
|
|
1013 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1014 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1015 |
</xs:restriction> |
| |
|
|
1016 |
</xs:simpleContent> |
| |
|
|
1017 |
</xs:complexType> |
| |
|
|
1018 |
</xs:element> |
| |
| |
|
-+ |
1020 |
<xs:element name="new_neoplasm_event_occurrence_anatomic_site" nillable="true"> |
| |
|
|
1021 |
<xs:complexType mixed="true"> |
| |
|
|
1022 |
<xs:simpleContent> |
| |
|
|
1023 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1024 |
<xs:enumeration value="" /> |
| |
|
|
1025 |
<xs:enumeration value="Renal Pelvis" /> |
| |
|
|
1026 |
<xs:enumeration value="Ureter" /> |
| |
|
|
1027 |
<xs:enumeration value="Lung" /> |
| |
|
|
1028 |
<xs:enumeration value="Urethra" /> |
| |
|
|
1029 |
<xs:enumeration value="Lymph Node Only" /> |
| |
|
|
1030 |
<xs:enumeration value="Other, specify" /> |
| |
|
|
1031 |
<xs:enumeration value="Liver" /> |
| |
|
|
1032 |
<xs:enumeration value="Bone" /> |
| |
|
|
1033 |
<xs:enumeration value="Bladder" /> |
| |
|
|
1034 |
<xs:attribute name="cde" type="xs:string" default="3108271" /> |
| |
|
|
1035 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1036 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1037 |
</xs:restriction> |
| |
|
|
1038 |
</xs:simpleContent> |
| |
|
|
1039 |
</xs:complexType> |
| |
|
|
1040 |
</xs:element> |
| |
| |
|
-+ |
1042 |
<xs:element name="new_neoplasm_occurrence_anatomic_site_text" nillable="true"> |
| |
|
|
1043 |
<xs:complexType> |
| |
|
|
1044 |
<xs:simpleContent> |
| |
|
|
1045 |
<xs:extension base="xs:string"> |
| |
|
|
1046 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1047 |
<xs:attribute name="cde" type="xs:string" default="3128033" /> |
| |
|
|
1048 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1049 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1050 |
</xs:extension> |
| |
|
|
1051 |
</xs:simpleContent> |
| |
|
|
1052 |
</xs:complexType> |
| |
|
|
1053 |
</xs:element> |
| |
| |
|
-+ |
1055 |
<xs:element name="additional_treatment_completion_success_outcome_type" nillable="true"> |
| |
|
|
1056 |
<xs:complexType mixed="true"> |
| |
|
|
1057 |
<xs:simpleContent> |
| |
|
|
1058 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1059 |
<xs:enumeration value="" /> |
| |
|
|
1060 |
<xs:enumeration value="Progressive Disease" /> |
| |
|
|
1061 |
<xs:enumeration value="Stable Disease" /> |
| |
|
|
1062 |
<xs:enumeration value="Partial Response" /> |
| |
|
|
1063 |
<xs:enumeration value="Complete Response" /> |
| |
|
|
1064 |
<xs:attribute name="cde" type="xs:string" default="3033278" /> |
| |
|
|
1065 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1066 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1067 |
</xs:restriction> |
| |
|
|
1068 |
</xs:simpleContent> |
| |
|
|
1069 |
</xs:complexType> |
| |
|
|
1070 |
</xs:element> |
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:brca_shared="http://tcga.nci/bcr/xml/clinical/brca/shared/2.5" |
|
|
|
| 10 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 11 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 12 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 13 |
xmlns:follow_up_v1.5="http://tcga.nci/bcr/xml/clinical/brca/followup/2.5/1.5" |
|
|
|
| 14 |
xmlns:follow_up_v2.1="http://tcga.nci/bcr/xml/clinical/brca/followup/2.5/2.1" |
|
|
|
| 15 |
xmlns="http://tcga.nci/bcr/xml/clinical/brca/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/brca/2.4" |
| 16 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/brca/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/brca/2.4" |
| |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/brca/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/brca/shared/2.5/TCGA_BCR.BRCA_Clinical_Shared_Datatypes.xsd" /> |
|
|
|
| 39 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/brca/followup/2.5/1.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/brca/followup/2.5/TCGA_BCR.BRCA_Clinical_FollowUp_v1.5.xsd" /> |
|
|
|
| 40 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/brca/followup/2.5/2.1" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/brca/followup/2.5/TCGA_BCR.BRCA_Clinical_FollowUp_v2.1.xsd" /> |
|
|
|
| |
| 49 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 60 |
<xs:element ref="shared:vital_status"> |
<> |
51 |
<xs:element ref="shared:vital_status" /> |
| 61 |
<xs:annotation> |
|
|
|
| 62 |
<xs:documentation xml:lang="en">The vital_status question is asked in both the initial enrollment form and the follow-up form(s).</xs:documentation> |
|
|
|
| 63 |
</xs:annotation> |
|
|
|
| 64 |
</xs:element> |
|
|
|
| |
| 76 |
<xs:annotation> |
+- |
|
|
| 77 |
<xs:documentation xml:lang="en"> |
|
|
|
| 78 |
The date_of_last_known_alive question is asked in both the initial enrollment form and the follow-up form(s). |
|
|
|
| |
| 80 |
DEPRECATED: |
+- |
|
|
| 81 |
This question is no longer asked on the TCGA Clinical Data initial enrollment form or follow-up Forms (starting with v2.0) |
|
|
|
| 82 |
within the BRCA study. |
|
|
|
| 83 |
</xs:documentation> |
|
|
|
| 84 |
</xs:annotation> |
|
|
|
| |
| 94 |
<xs:annotation> |
+- |
|
|
| 95 |
<xs:documentation xml:lang="en">The date_of_death question is asked in both the initial enrollment form and the follow-up form(s).</xs:documentation> |
|
|
|
| 96 |
</xs:annotation> |
|
|
|
| |
| 106 |
<xs:annotation> |
+- |
|
|
| 107 |
<xs:documentation xml:lang="en">The date_of_last_followup question is asked in both the initial enrollment form and the follow-up form(s).</xs:documentation> |
|
|
|
| 108 |
</xs:annotation> |
|
|
|
| |
| |
|
-+ |
99 |
<xs:element ref="shared:radiation_therapy" /> |
| |
| |
|
-+ |
119 |
<xs:choice> |
| |
|
|
120 |
<xs:sequence> |
| |
|
|
121 |
<xs:element ref="shared:day_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
122 |
<xs:element ref="shared:month_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
123 |
<xs:element ref="shared:year_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
124 |
</xs:sequence> |
| |
| |
|
-+ |
126 |
<xs:element ref="shared:days_to_new_tumor_event_after_initial_treatment" /> |
| |
|
|
127 |
</xs:choice> |
| |
| |
|
<> |
130 |
<xs:element ref="shared:additional_radiation_therapy" /> |
| 141 |
<xs:element ref="shared:person_neoplasm_cancer_status"> |
|
131 |
<xs:element ref="shared:additional_pharmaceutical_therapy" /> |
| |
|
|
132 |
<xs:element ref="shared:additional_surgery_locoregional_procedure" /> |
| |
| 142 |
<xs:annotation> |
<> |
134 |
<xs:choice> |
| 143 |
<xs:documentation xml:lang="en">The person_neoplasm_cancer_status question is asked in both the initial enrollment form and the follow-up form(s).</xs:documentation> |
|
135 |
<xs:sequence> |
| |
|
|
136 |
<xs:element ref="shared:day_of_additional_surgery_locoregional_procedure" /> |
| |
|
|
137 |
<xs:element ref="shared:month_of_additional_surgery_locoregional_procedure" /> |
| |
|
|
138 |
<xs:element ref="shared:year_of_additional_surgery_locoregional_procedure" /> |
| |
|
|
139 |
</xs:sequence> |
| |
| |
|
<> |
141 |
<xs:element ref="shared:days_to_additional_surgery_locoregional_procedure" /> |
| 144 |
</xs:annotation> |
|
142 |
</xs:choice> |
| |
| |
|
-+ |
144 |
<xs:element ref="shared:additional_surgery_metastatic_procedure" /> |
| |
| |
|
<> |
146 |
<xs:choice> |
| |
|
|
147 |
<xs:sequence> |
| |
|
|
148 |
<xs:element ref="shared:day_of_additional_surgery_metastatic_procedure" /> |
| |
|
|
149 |
<xs:element ref="shared:month_of_additional_surgery_metastatic_procedure" /> |
| |
|
|
150 |
<xs:element ref="shared:year_of_additional_surgery_metastatic_procedure" /> |
| 145 |
</xs:element> |
|
151 |
</xs:sequence> |
| |
| |
|
-+ |
153 |
<xs:element ref="shared:days_to_additional_surgery_metastatic_procedure" /> |
| |
|
|
154 |
</xs:choice> |
| |
| 146 |
<xs:element ref="shared:primary_lymph_node_presentation_assessment" /> |
<> |
156 |
<xs:element ref="shared:person_neoplasm_cancer_status" /> |
| 147 |
<xs:element ref="shared:lymph_node_examined_count" /> |
|
157 |
<xs:element ref="lymph_node_examined_count" /> |
| 148 |
<xs:element ref="brca_shared:er_detection_method_text" /> |
|
158 |
<xs:element ref="er_detection_method_text" /> |
| 149 |
<xs:element ref="brca_shared:pgr_detection_method_text" /> |
|
159 |
<xs:element ref="pgr_detection_method_text" /> |
| |
| 151 |
<xs:element ref="shared:ajcc_tumor_stage_code" /> |
<> |
161 |
<xs:element ref="breast_tumor_pathologic_t_stage" /> |
| 152 |
<xs:element ref="shared:ajcc_neoplasm_disease_lymph_node_stage" /> |
|
162 |
<xs:element ref="breast_tumor_pathologic_n_stage" /> |
| 153 |
<xs:element ref="anatomic_organ_subdivisions" /> |
|
163 |
<xs:element ref="anatomic_site_location_descriptors" /> |
| 154 |
<xs:element ref="brca_shared:her2_neu_chromosone_17_signal_ratio_value" /> |
|
164 |
<xs:element ref="her2_neu_chromosone_17_signal_ratio_value" /> |
| |
| 160 |
<xs:element ref="breast_carcinoma_primary_surgical_procedure_name" /> |
<> |
170 |
<xs:element ref="breast_carcinoma_first_surgical_procedure_name" /> |
| |
| 163 |
<xs:element ref="shared:tumor_other_histologic_subtype_descriptive_text" /> |
<> |
173 |
<xs:element ref="tumor_other_histologic_subtype_descriptive_text" /> |
| 164 |
<xs:element ref="menopause_status" /> |
|
174 |
<xs:element ref="person_menopause_status" /> |
| |
| 166 |
<xs:element ref="brca_shared:breast_carcinoma_progesterone_receptor_status" /> |
<> |
175 |
<xs:element ref="breast_carcinoma_progesterone_receptor_status" /> |
| |
| 168 |
<xs:element ref="breast_carcinoma_immunohistochemistry_er_pos_finding_scale" /> |
<> |
|
|
| 169 |
<xs:element ref="brca_shared:immunohistochemistry_positive_cell_score" /> |
|
177 |
<xs:element ref="immunohistochemistry_positive_cell_score" /> |
| 170 |
<xs:element ref="brca_shared:her2_immunohistochemistry_level_result" /> |
|
178 |
<xs:element ref="her2_immunohistochemistry_level_result" /> |
| |
| 172 |
<xs:element ref="shared:margin_status" /> |
<> |
180 |
<xs:element ref="disease_surgical_margin_status" /> |
| 173 |
<xs:element ref="shared:initial_pathologic_diagnosis_method" /> |
|
181 |
<xs:element ref="first_pathologic_diagnosis_biospecimen_acquisition_method_type" /> |
| |
| |
|
<> |
183 |
<xs:element ref="adjuvant_postop_targeted_therapy_admin_indicator" /> |
| 175 |
<xs:element ref="brca_shared:lab_procedure_her2_neu_in_situ_hybrid_outcome_type" /> |
|
184 |
<xs:element ref="lab_procedure_her2_neu_in_situ_hybrid_outcome_type" /> |
| 176 |
<xs:element ref="brca_shared:breast_carcinoma_estrogen_receptor_status" /> |
|
185 |
<xs:element ref="breast_carcinoma_estrogen_receptor_status" /> |
| 177 |
<xs:element ref="brca_shared:lab_proc_her2_neu_immunohistochemistry_receptor_status" /> |
|
186 |
<xs:element ref="lab_proc_her2_neu_immunohistochemistry_receptor_status" /> |
| 178 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_ihc" /> |
|
187 |
<xs:element ref="pos_finding_lymph_node_keratin_immunohistochemistry_staining_method_count" /> |
| 179 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_he" /> |
|
188 |
<xs:element ref="pos_finding_lymph_node_hematoxylin_and_eosin_staining_microscopy_count" /> |
| 180 |
<xs:element ref="brca_shared:pos_finding_progesterone_receptor_other_measurement_scale_text" /> |
|
189 |
<xs:element ref="pos_finding_progesterone_receptor_other_measurement_scale_text" /> |
| 181 |
<xs:element ref="brca_shared:positive_finding_estrogen_receptor_other_measurement_scale_text" /> |
|
190 |
<xs:element ref="positive_finding_estrogen_receptor_other_measurement_scale_text" /> |
| 182 |
<xs:element ref="brca_shared:her2_erbb_pos_finding_cell_percent_category" /> |
|
191 |
<xs:element ref="her2_erbb_pos_finding_cell_percent_category" /> |
| 183 |
<xs:element ref="brca_shared:pos_finding_her2_erbb2_other_measurement_scale_text" /> |
|
192 |
<xs:element ref="pos_finding_her2_erbb2_other_measurement_scale_text" /> |
| 184 |
<xs:element ref="brca_shared:her2_erbb_method_calculation_method_text" /> |
|
193 |
<xs:element ref="her2_erbb_method_calculation_method_text" /> |
| 185 |
<xs:element ref="brca_shared:her2_neu_and_centromere_17_copy_number_analysis_input_total_number_count" /> |
|
194 |
<xs:element ref="her2_neu_and_centromere_17_copy_number_analysis_input_total_number_count" /> |
| 186 |
<xs:element ref="brca_shared:her2_and_centromere_17_positive_finding_other_measurement_scale_text" /> |
|
195 |
<xs:element ref="her2_and_centromere_17_positive_finding_other_measurement_scale_text" /> |
| 187 |
<xs:element ref="brca_shared:her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text" /> |
|
196 |
<xs:element ref="her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text" /> |
| |
| 190 |
<xs:element ref="brca_shared:fluorescence_in_situ_hybridization_diagnostic_procedure_chromosome_17_signal_result_range" /> |
<> |
199 |
<xs:element ref="fluorescence_in_situ_hybridization_diagnostic_procedure_chromosome_17_signal_result_range" /> |
| |
| 192 |
<xs:element ref="shared:ajcc_cancer_metastasis_stage_code" /> |
<> |
201 |
<xs:element ref="breast_tumor_clinical_m_stage" /> |
| 193 |
<xs:element ref="brca_shared:er_level_cell_percentage_category" /> |
|
202 |
<xs:element ref="er_level_cell_percentage_category" /> |
| 194 |
<xs:element ref="brca_shared:progesterone_receptor_level_cell_percent_category" /> |
|
203 |
<xs:element ref="progesterone_receptor_level_cell_percent_category" /> |
| 195 |
<xs:element ref="distant_metastasis_present_ind2" /> |
|
|
|
| 196 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_estrogen_receptor_status" /> |
|
204 |
<xs:element ref="metastatic_breast_carcinoma_estrogen_receptor_status" /> |
| 197 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_estrogen_receptor_level_cell_percent_category" /> |
|
205 |
<xs:element ref="metastatic_breast_carcinoma_estrogen_receptor_level_cell_percent_category" /> |
| 198 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_immunohistochemistry_er_pos_cell_score" /> |
|
206 |
<xs:element ref="metastatic_breast_carcinoma_immunohistochemistry_er_pos_cell_score" /> |
| 199 |
<xs:element ref="brca_shared:pos_finding_metastatic_breast_carcinoma_estrogen_receptor_other_measuremenet_scale_text" /> |
|
207 |
<xs:element ref="pos_finding_metastatic_breast_carcinoma_estrogen_receptor_other_measuremenet_scale_text" /> |
| 200 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_estrogen_receptor_detection_method_text" /> |
|
208 |
<xs:element ref="metastatic_breast_carcinoma_estrogen_receptor_detection_method_text" /> |
| 201 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_progesterone_receptor_status" /> |
|
209 |
<xs:element ref="metastatic_breast_carcinoma_progesterone_receptor_status" /> |
| 202 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_lab_proc_her2_neu_immunohistochemistry_receptor_status" /> |
|
210 |
<xs:element ref="metastatic_breast_carcinoma_lab_proc_her2_neu_immunohistochemistry_receptor_status" /> |
| 203 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_progesterone_receptor_level_cell_percent_category" /> |
|
211 |
<xs:element ref="metastatic_breast_carcinoma_progesterone_receptor_level_cell_percent_category" /> |
| 204 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_immunohistochemistry_pr_pos_cell_score" /> |
|
212 |
<xs:element ref="metastatic_breast_carcinoma_immunohistochemistry_pr_pos_cell_score" /> |
| 205 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_pos_finding_progesterone_receptor_other_measure_scale_text" /> |
|
213 |
<xs:element ref="metastatic_breast_carcinoma_pos_finding_progesterone_receptor_other_measure_scale_text" /> |
| 206 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_progesterone_receptor_detection_method_text" /> |
|
214 |
<xs:element ref="metastatic_breast_carcinoma_progesterone_receptor_detection_method_text" /> |
| 207 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_her2_erbb_pos_finding_cell_percent_category" /> |
|
215 |
<xs:element ref="metastatic_breast_carcinoma_her2_erbb_pos_finding_cell_percent_category" /> |
| 208 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_erbb2_immunohistochemistry_level_result" /> |
|
216 |
<xs:element ref="metastatic_breast_carcinoma_erbb2_immunohistochemistry_level_result" /> |
| 209 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_pos_finding_her2_erbb2_other_measure_scale_text" /> |
|
217 |
<xs:element ref="metastatic_breast_carcinoma_pos_finding_her2_erbb2_other_measure_scale_text" /> |
| 210 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_her2_erbb_method_calculation_method_text" /> |
|
218 |
<xs:element ref="metastatic_breast_carcinoma_her2_erbb_method_calculation_method_text" /> |
| 211 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_lab_proc_her2_neu_in_situ_hybridization_outcome_type" /> |
|
219 |
<xs:element ref="metastatic_breast_carcinoma_lab_proc_her2_neu_in_situ_hybridization_outcome_type" /> |
| 212 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_fluorescence_in_situ_hybridization_diagnostic_proc_centromere_17_signal_result_range" /> |
|
220 |
<xs:element ref="metastatic_breast_carcinoma_fluorescence_in_situ_hybridization_diagnostic_proc_centromere_17_signal_result_range" /> |
| 213 |
<xs:element ref="brca_shared:her2_neu_and_centromere_17_copy_number_metastatic_breast_carcinoma_analysis_input_total_number_count" /> |
|
221 |
<xs:element ref="her2_neu_and_centromere_17_copy_number_metastatic_breast_carcinoma_analysis_input_total_number_count" /> |
| 214 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_her2_neu_chromosone_17_signal_ratio_value" /> |
|
222 |
<xs:element ref="metastatic_breast_carcinoma_her2_neu_chromosone_17_signal_ratio_value" /> |
| 215 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_pos_finding_other_scale_measurement_text" /> |
|
223 |
<xs:element ref="metastatic_breast_carcinoma_pos_finding_other_scale_measurement_text" /> |
| 216 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text" /> |
|
224 |
<xs:element ref="metastatic_breast_carcinoma_her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text" /> |
| 217 |
<xs:element ref="brca_shared:her2_neu_metastatic_breast_carcinoma_copy_analysis_input_total_number" /> |
|
225 |
<xs:element ref="her2_neu_metastatic_breast_carcinoma_copy_analysis_input_total_number" /> |
| 218 |
<xs:element ref="brca_shared:her2_neu_breast_carcinoma_copy_analysis_input_total_number" /> |
|
226 |
<xs:element ref="her2_neu_breast_carcinoma_copy_analysis_input_total_number" /> |
| 219 |
<xs:element ref="breast_carcinoma_immunohistochemistry_progesterone_receptor_pos_finding_scale" /> |
|
|
|
| 220 |
<xs:element ref="brca_shared:breast_carcinoma_immunohistochemistry_pos_cell_score" /> |
|
227 |
<xs:element ref="breast_carcinoma_immunohistochemistry_pos_cell_score" /> |
| 221 |
<xs:element ref="shared:ajcc_neoplasm_disease_stage" /> |
|
228 |
<xs:element ref="breast_tumor_pathologic_grouping_stage" /> |
| |
| 224 |
<xs:annotation> |
+- |
|
|
| 225 |
<xs:documentation xml:lang="en"> |
|
|
|
| 226 |
Date the interviewer originally completed the corresponding TCGA Clinical Data Form. |
|
|
|
| 227 |
If modifications are made after the form is marked complete, this date should not change. |
|
|
|
| 228 |
</xs:documentation> |
|
|
|
| 229 |
</xs:annotation> |
|
|
|
| |
| 238 |
<xs:element ref="follow_ups" /> |
+- |
|
|
| |
| 241 |
<xs:element ref="clinical_cqcf" /> |
+- |
|
|
| |
| |
|
<> |
246 |
<xs:element name="lymph_node_examined_count" nillable="true"> |
| |
|
|
247 |
<xs:complexType> |
| 246 |
<xs:element name="follow_ups"> |
|
248 |
<xs:simpleContent> |
| |
|
|
249 |
<xs:extension base="xs:string"> |
| |
|
|
250 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
251 |
<xs:attribute name="cde" type="xs:string" default="3" /> |
| |
|
|
252 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
253 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 247 |
<xs:annotation> |
|
254 |
</xs:extension> |
| 248 |
<xs:documentation xml:lang="en">We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
|
|
| 249 |
</xs:annotation> |
|
255 |
</xs:simpleContent> |
| |
|
|
256 |
</xs:complexType> |
| |
|
|
257 |
</xs:element> |
| |
| |
|
-+ |
259 |
<xs:element name="er_detection_method_text" nillable="true"> |
| |
| 251 |
<xs:sequence> |
<> |
261 |
<xs:simpleContent> |
| 252 |
<xs:element ref="follow_up_v1.5:follow_up_v1.5" minOccurs="0" maxOccurs="unbounded" /> |
|
262 |
<xs:extension base="xs:string"> |
| |
|
|
263 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
264 |
<xs:attribute name="cde" type="xs:string" default="69" /> |
| 253 |
<xs:element ref="follow_up_v2.1:follow_up_v2.1" minOccurs="0" maxOccurs="unbounded" /> |
|
265 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
266 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 254 |
</xs:sequence> |
|
267 |
</xs:extension> |
| |
|
|
268 |
</xs:simpleContent> |
| |
| 258 |
<xs:element name="clinical_cqcf"> |
<> |
272 |
<xs:element name="pgr_detection_method_text" nillable="true"> |
| |
| |
|
<> |
274 |
<xs:simpleContent> |
| |
|
|
275 |
<xs:extension base="xs:string"> |
| |
|
|
276 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
277 |
<xs:attribute name="cde" type="xs:string" default="785" /> |
| |
|
|
278 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
279 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
280 |
</xs:extension> |
| |
|
|
281 |
</xs:simpleContent> |
| |
|
|
282 |
</xs:complexType> |
| 260 |
<xs:sequence> |
|
283 |
</xs:element> |
| |
| 261 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
<> |
285 |
<xs:element name="breast_tumor_pathologic_t_stage" nillable="true"> |
| |
|
|
286 |
<xs:complexType mixed="true"> |
| |
|
|
287 |
<xs:simpleContent> |
| 262 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
288 |
<xs:restriction base="utility:clinical_res_attributes"> |
| 263 |
|
|
289 |
<xs:enumeration value="" /> |
| |
|
|
290 |
<xs:enumeration value="TX" /> |
| |
|
|
291 |
<xs:enumeration value="T0" /> |
| |
|
|
292 |
<xs:enumeration value="Tis" /> |
| |
|
|
293 |
<xs:enumeration value="Tis (DCIS)" /> |
| |
|
|
294 |
<xs:enumeration value="Tis (LCIS)" /> |
| |
|
|
295 |
<xs:enumeration value="Tis (Paget's)" /> |
| |
|
|
296 |
<xs:enumeration value="T1mi" /> |
| |
|
|
297 |
<xs:enumeration value="T1" /> |
| |
|
|
298 |
<xs:enumeration value="T1a" /> |
| |
|
|
299 |
<xs:enumeration value="T1b" /> |
| |
|
|
300 |
<xs:enumeration value="T1c" /> |
| |
|
|
301 |
<xs:enumeration value="T2" /> |
| |
|
|
302 |
<xs:enumeration value="T2a" /> |
| |
|
|
303 |
<xs:enumeration value="T2b" /> |
| |
|
|
304 |
<xs:enumeration value="T2c" /> |
| |
|
|
305 |
<xs:enumeration value="Ta" /> |
| |
|
|
306 |
<xs:enumeration value="T3" /> |
| |
|
|
307 |
<xs:enumeration value="T3a" /> |
| |
|
|
308 |
<xs:enumeration value="T3b" /> |
| |
|
|
309 |
<xs:enumeration value="T3c" /> |
| |
|
|
310 |
<xs:enumeration value="T4" /> |
| |
|
|
311 |
<xs:enumeration value="T4a" /> |
| |
|
|
312 |
<xs:enumeration value="T4b" /> |
| |
|
|
313 |
<xs:enumeration value="T4c" /> |
| |
|
|
314 |
<xs:enumeration value="T4d" /> |
| |
|
|
315 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
316 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4.1" /> |
| |
|
|
317 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 264 |
<xs:choice> |
|
318 |
</xs:restriction> |
| |
|
|
319 |
</xs:simpleContent> |
| 265 |
<xs:choice> |
|
320 |
</xs:complexType> |
| 266 |
<xs:sequence> |
|
321 |
</xs:element> |
| |
| |
|
<> |
323 |
<xs:element name="breast_tumor_pathologic_n_stage" nillable="true"> |
| |
|
|
324 |
<xs:complexType mixed="true"> |
| |
|
|
325 |
<xs:simpleContent> |
| |
|
|
326 |
<xs:restriction base="utility:clinical_res_attributes"> |
| 267 |
<xs:element ref="cqcf:day_of_consent"/> |
|
327 |
<xs:enumeration value="" /> |
| |
|
|
328 |
<xs:enumeration value="NX" /> |
| |
|
|
329 |
<xs:enumeration value="N0" /> |
| |
|
|
330 |
<xs:enumeration value="N0 (i-)" /> |
| |
|
|
331 |
<xs:enumeration value="N0 (i+)" /> |
| |
|
|
332 |
<xs:enumeration value="N0 (mol-)" /> |
| |
|
|
333 |
<xs:enumeration value="N0 (mol+)" /> |
| |
|
|
334 |
<xs:enumeration value="N1" /> |
| |
|
|
335 |
<xs:enumeration value="N1mi" /> |
| |
|
|
336 |
<xs:enumeration value="N1a" /> |
| |
|
|
337 |
<xs:enumeration value="N1b" /> |
| |
|
|
338 |
<xs:enumeration value="N1bI" /> |
| |
|
|
339 |
<xs:enumeration value="N1bII" /> |
| |
|
|
340 |
<xs:enumeration value="N1bIII" /> |
| |
|
|
341 |
<xs:enumeration value="N1bIV" /> |
| 268 |
<xs:element ref="cqcf:month_of_consent"/> |
|
342 |
<xs:enumeration value="N1c" /> |
| |
|
|
343 |
<xs:enumeration value="N2" /> |
| |
|
|
344 |
<xs:enumeration value="N2a" /> |
| |
|
|
345 |
<xs:enumeration value="N2b" /> |
| |
|
|
346 |
<xs:enumeration value="N3" /> |
| |
|
|
347 |
<xs:enumeration value="N3a" /> |
| |
|
|
348 |
<xs:enumeration value="N3b" /> |
| 269 |
<xs:element ref="cqcf:year_of_consent"/> |
|
349 |
<xs:enumeration value="N3c" /> |
| |
|
|
350 |
<xs:enumeration value="N4" /> |
| |
|
|
351 |
<xs:enumeration value="pN0" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
352 |
<xs:enumeration value="pN1" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
353 |
<xs:enumeration value="pN2" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
354 |
<xs:enumeration value="pN3" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
355 |
<xs:enumeration value="pNX" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
356 |
<xs:enumeration value="pN0(i-)" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
357 |
<xs:enumeration value="pN0(i+)" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
358 |
<xs:enumeration value="pN0(mol-)" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
359 |
<xs:enumeration value="pN0(mol+)" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
360 |
<xs:enumeration value="pN1mi" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
361 |
<xs:enumeration value="pN1a" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
362 |
<xs:enumeration value="pN1b" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
363 |
<xs:enumeration value="pN1c" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
364 |
<xs:enumeration value="pN2a" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
365 |
<xs:enumeration value="pN2b" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
366 |
<xs:enumeration value="pN3a" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
367 |
<xs:enumeration value="pN3b" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
368 |
<xs:enumeration value="pN3c" /> <!-- Deprecated. Will be removed in 2.5. This permissible value is not in the current CDE --> |
| |
|
|
369 |
<xs:attribute name="cde" type="xs:string" default="3203106" /> |
| |
|
|
370 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4.1" /> |
| |
|
|
371 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
372 |
</xs:restriction> |
| |
|
|
373 |
</xs:simpleContent> |
| |
|
|
374 |
</xs:complexType> |
| 270 |
</xs:sequence> |
|
375 |
</xs:element> |
| |
| 272 |
<xs:element ref="cqcf:days_to_consent"/> |
<> |
377 |
<xs:element name="anatomic_site_location_descriptors"> |
| 273 |
</xs:choice> |
|
|
|
| |
| 275 |
<xs:choice> |
<> |
378 |
<xs:complexType> |
| |
| 277 |
<xs:element ref="shared:day_of_death"/> |
<> |
380 |
<xs:element ref="anatomic_site_location_descriptor" minOccurs="0" maxOccurs="unbounded" /> |
| 278 |
<xs:element ref="shared:month_of_death"/> |
|
|
|
| 279 |
<xs:element ref="shared:year_of_death"/> |
|
|
|
| |
| 282 |
<xs:element ref="shared:days_to_death"/> |
<> |
|
|
| 283 |
</xs:choice> |
|
382 |
</xs:complexType> |
| 284 |
</xs:choice> |
|
383 |
</xs:element> |
| |
| |
|
<> |
385 |
<xs:element name="anatomic_site_location_descriptor" nillable="true"> |
| |
|
|
386 |
<xs:complexType mixed="true"> |
| |
|
|
387 |
<xs:simpleContent> |
| 286 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
|
388 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
389 |
<xs:enumeration value="" /> |
| 287 |
<xs:element ref="shared:prior_diagnosis"/> |
|
390 |
<xs:enumeration value="Right Upper Inner Quadrant" /> |
| |
|
|
391 |
<xs:enumeration value="Right Upper Outer Quadrant" /> |
| |
|
|
392 |
<xs:enumeration value="Right Lower Inner Quadrant" /> |
| |
|
|
393 |
<xs:enumeration value="Right Lower Outer Quadrant" /> |
| 288 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
394 |
<xs:enumeration value="Left Upper Inner Quadrant" /> |
| 289 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
|
395 |
<xs:enumeration value="Left Upper Outer Quadrant" /> |
| 290 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
396 |
<xs:enumeration value="Left Lower Inner Quadrant" /> |
| |
|
|
397 |
<xs:enumeration value="Left Lower Outer Quadrant" /> |
| 291 |
<xs:element ref="cqcf:tumor_focality"/> |
|
398 |
<xs:enumeration value="Left" /> |
| 292 |
<xs:element ref="cqcf:tumor_type"/> |
|
399 |
<xs:enumeration value="Right" /> |
| 293 |
<xs:element ref="cqcf:other_diagnosis"/> |
|
400 |
<xs:attribute name="cde" type="xs:string" default="2008006" /> |
| 294 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
401 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| 295 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
|
402 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 296 |
<xs:element ref="cqcf:country"/> |
|
403 |
</xs:restriction> |
| 297 |
</xs:sequence> |
|
404 |
</xs:simpleContent> |
| |
| 301 |
<xs:element name="anatomic_organ_subdivisions"> |
<> |
408 |
<xs:element name="her2_neu_chromosone_17_signal_ratio_value" nillable="true"> |
| |
| 303 |
<xs:sequence> |
<> |
410 |
<xs:simpleContent> |
| |
|
|
411 |
<xs:extension base="xs:decimal"> |
| |
|
|
412 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
413 |
<xs:attribute name="cde" type="xs:string" default="2497552" /> |
| 304 |
<xs:element ref="shared:anatomic_organ_subdivision" minOccurs="0" maxOccurs="unbounded" /> |
|
414 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
415 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 305 |
</xs:sequence> |
|
416 |
</xs:extension> |
| |
|
|
417 |
</xs:simpleContent> |
| |
| 358 |
<xs:element name="breast_carcinoma_primary_surgical_procedure_name" nillable="true"> |
<> |
470 |
<xs:element name="breast_carcinoma_first_surgical_procedure_name" nillable="true"> |
| |
| 363 |
<xs:enumeration value="None" /> |
<> |
475 |
<xs:enumeration value="Surgery not Performed" /> |
| |
| 365 |
<xs:enumeration value="Mastectomy NOS" /> |
<> |
477 |
<xs:enumeration value="Simple Mastectomy" /> |
| 366 |
<xs:enumeration value="Modified radical mastectomy" /> |
|
478 |
<xs:enumeration value="Modified Radical Mastectomy" /> |
| |
| 368 |
<xs:attribute name="cde" type="xs:string" default="1218" /> |
<> |
480 |
<xs:attribute name="cde" type="xs:string" default="2739580" /> |
| |
| 381 |
<xs:attribute name="cde" type="xs:string" default="3020338" /> |
<> |
493 |
<xs:attribute name="cde" type="xs:string" default="2467630" /> |
| |
| 422 |
<xs:element name="menopause_status" nillable="true"> |
<> |
534 |
<xs:element name="person_menopause_status" nillable="true"> |
| |
| |
|
-+ |
551 |
<xs:element name="breast_carcinoma_progesterone_receptor_status" nillable="true"> |
| |
|
|
552 |
<xs:complexType> |
| |
|
|
553 |
<xs:simpleContent> |
| |
|
|
554 |
<xs:extension base="posNegStat"> |
| |
|
|
555 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
556 |
<xs:attribute name="cde" type="xs:string" default="2957357" /> |
| |
|
|
557 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
558 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
559 |
</xs:extension> |
| |
|
|
560 |
</xs:simpleContent> |
| |
|
|
561 |
</xs:complexType> |
| |
|
|
562 |
</xs:element> |
| |
| |
|
-+ |
577 |
<xs:element name="immunohistochemistry_positive_cell_score" nillable="true"> |
| |
|
|
578 |
<xs:complexType> |
| |
|
|
579 |
<xs:simpleContent> |
| |
|
|
580 |
<xs:extension base="onePlusToFourPlus"> |
| |
|
|
581 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
582 |
<xs:attribute name="cde" type="xs:string" default="2230166" /> |
| |
|
|
583 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
584 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
585 |
</xs:extension> |
| |
|
|
586 |
</xs:simpleContent> |
| |
|
|
587 |
</xs:complexType> |
| |
|
|
588 |
</xs:element> |
| |
| |
|
-+ |
590 |
<xs:element name="her2_immunohistochemistry_level_result" nillable="true"> |
| |
|
|
591 |
<xs:complexType> |
| |
|
|
592 |
<xs:simpleContent> |
| |
|
|
593 |
<xs:extension base="onePlusToFourPlus"> |
| |
|
|
594 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
595 |
<xs:attribute name="cde" type="xs:string" default="2178402" /> |
| |
|
|
596 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
597 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
598 |
</xs:extension> |
| |
|
|
599 |
</xs:simpleContent> |
| |
|
|
600 |
</xs:complexType> |
| |
|
|
601 |
</xs:element> |
| |
| |
|
-+ |
603 |
<xs:element name="breast_cancer_surgery_margin_status" nillable="true"> |
| |
|
|
604 |
<xs:complexType> |
| |
|
|
605 |
<xs:simpleContent> |
| |
|
|
606 |
<xs:extension base="posNegClose"> |
| |
|
|
607 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
608 |
<xs:attribute name="cde" type="xs:string" default="2241252" /> |
| |
|
|
609 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
610 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
611 |
</xs:extension> |
| |
|
|
612 |
</xs:simpleContent> |
| |
|
|
613 |
</xs:complexType> |
| |
|
|
614 |
</xs:element> |
| |
| |
|
-+ |
616 |
<xs:element name="disease_surgical_margin_status" nillable="true"> |
| |
|
|
617 |
<xs:complexType> |
| |
|
|
618 |
<xs:simpleContent> |
| |
|
|
619 |
<xs:extension base="posNegClose"> |
| |
|
|
620 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
621 |
<xs:attribute name="cde" type="xs:string" default="3114007" /> |
| |
|
|
622 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
623 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
624 |
</xs:extension> |
| |
|
|
625 |
</xs:simpleContent> |
| |
|
|
626 |
</xs:complexType> |
| |
|
|
627 |
</xs:element> |
| |
| 452 |
<xs:element name="breast_carcinoma_immunohistochemistry_er_pos_finding_scale" nillable="true"> |
<> |
629 |
<xs:element name="first_pathologic_diagnosis_biospecimen_acquisition_method_type" nillable="true"> |
| |
| |
|
<> |
634 |
<xs:enumeration value="Other method specify:" /> |
| 457 |
<xs:enumeration value="4 Point Scale" /> |
|
635 |
<xs:enumeration value="Aspirate" /> |
| |
|
|
636 |
<xs:enumeration value="Core needle biopsy" /> |
| |
|
|
637 |
<xs:enumeration value="Cytology (e.g. Peritoneal or pleural fluid)" /> |
| |
|
|
638 |
<xs:enumeration value="Dilation and curettage procedure" /> |
| |
|
|
639 |
<xs:enumeration value="Endoscopic Biopsy" /> |
| |
|
|
640 |
<xs:enumeration value="Excisional Biopsy" /> |
| |
|
|
641 |
<xs:enumeration value="Fine needle aspiration biopsy" /> |
| |
|
|
642 |
<xs:enumeration value="Incisional Biopsy" /> |
| 458 |
<xs:enumeration value="3 Point Scale" /> |
|
643 |
<xs:enumeration value="Office Endometrial Biopsy" /> |
| |
|
|
644 |
<xs:enumeration value="Tumor resection" /> |
| 459 |
<xs:attribute name="cde" type="xs:string" default="3203081" /> |
|
645 |
<xs:attribute name="cde" type="xs:string" default="2757941" /> |
| 460 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
646 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
| |
|
-+ |
653 |
<xs:element name="adjuvant_postop_targeted_therapy_admin_indicator" nillable="true"> |
| |
|
|
654 |
<xs:complexType> |
| |
|
|
655 |
<xs:simpleContent> |
| |
|
|
656 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
657 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
658 |
<xs:attribute name="cde" type="xs:string" default="2785850" /> |
| |
|
|
659 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
660 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
661 |
</xs:extension> |
| |
|
|
662 |
</xs:simpleContent> |
| |
|
|
663 |
</xs:complexType> |
| |
|
|
664 |
</xs:element> |
| |
| |
|
-+ |
666 |
<xs:element name="lab_procedure_her2_neu_in_situ_hybrid_outcome_type" nillable="true"> |
| |
|
|
667 |
<xs:complexType> |
| |
|
|
668 |
<xs:simpleContent> |
| |
|
|
669 |
<xs:extension base="posNegStat"> |
| |
|
|
670 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
671 |
<xs:attribute name="cde" type="xs:string" default="2854089" /> |
| |
|
|
672 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
673 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
674 |
</xs:extension> |
| |
|
|
675 |
</xs:simpleContent> |
| |
|
|
676 |
</xs:complexType> |
| |
|
|
677 |
</xs:element> |
| |
| 467 |
<xs:element name="breast_cancer_surgery_margin_status" nillable="true"> |
<> |
679 |
<xs:element name="breast_carcinoma_estrogen_receptor_status" nillable="true"> |
| |
| 470 |
<xs:extension base="brca_shared:posNegClose"> |
<> |
682 |
<xs:extension base="posNegStat"> |
| |
| 472 |
<xs:attribute name="cde" type="xs:string" default="2241252" /> |
<> |
684 |
<xs:attribute name="cde" type="xs:string" default="2957359" /> |
| |
|
|
685 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
686 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
687 |
</xs:extension> |
| |
|
|
688 |
</xs:simpleContent> |
| |
|
|
689 |
</xs:complexType> |
| |
|
|
690 |
</xs:element> |
| |
| |
|
-+ |
692 |
<xs:element name="lab_proc_her2_neu_immunohistochemistry_receptor_status" nillable="true"> |
| |
|
|
693 |
<xs:complexType> |
| |
|
|
694 |
<xs:simpleContent> |
| |
|
|
695 |
<xs:extension base="posNegStat"> |
| |
|
|
696 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
697 |
<xs:attribute name="cde" type="xs:string" default="2957563" /> |
| |
|
|
698 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
699 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
700 |
</xs:extension> |
| |
|
|
701 |
</xs:simpleContent> |
| |
|
|
702 |
</xs:complexType> |
| |
|
|
703 |
</xs:element> |
| |
| |
|
-+ |
705 |
<xs:element name="pos_finding_lymph_node_keratin_immunohistochemistry_staining_method_count" nillable="true"> |
| |
|
|
706 |
<xs:complexType> |
| |
|
|
707 |
<xs:simpleContent> |
| |
|
|
708 |
<xs:extension base="xs:integer"> |
| |
|
|
709 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
710 |
<xs:attribute name="cde" type="xs:string" default="3086383" /> |
| |
|
|
711 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
712 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
713 |
</xs:extension> |
| |
|
|
714 |
</xs:simpleContent> |
| |
|
|
715 |
</xs:complexType> |
| |
|
|
716 |
</xs:element> |
| |
| |
|
-+ |
718 |
<xs:element name="pos_finding_lymph_node_hematoxylin_and_eosin_staining_microscopy_count" nillable="true"> |
| |
|
|
719 |
<xs:complexType> |
| |
|
|
720 |
<xs:simpleContent> |
| |
|
|
721 |
<xs:extension base="xs:integer"> |
| |
|
|
722 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
723 |
<xs:attribute name="cde" type="xs:string" default="3086388" /> |
| |
|
|
724 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
725 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
726 |
</xs:extension> |
| |
|
|
727 |
</xs:simpleContent> |
| |
|
|
728 |
</xs:complexType> |
| |
|
|
729 |
</xs:element> |
| |
| |
|
-+ |
731 |
<xs:element name="pos_finding_progesterone_receptor_other_measurement_scale_text" nillable="true"> |
| |
|
|
732 |
<xs:complexType> |
| |
|
|
733 |
<xs:simpleContent> |
| |
|
|
734 |
<xs:extension base="xs:string"> |
| |
|
|
735 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
736 |
<xs:attribute name="cde" type="xs:string" default="3086857" /> |
| |
|
|
737 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
738 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
739 |
</xs:extension> |
| |
|
|
740 |
</xs:simpleContent> |
| |
|
|
741 |
</xs:complexType> |
| |
|
|
742 |
</xs:element> |
| |
| |
|
-+ |
744 |
<xs:element name="positive_finding_estrogen_receptor_other_measurement_scale_text" nillable="true"> |
| |
|
|
745 |
<xs:complexType> |
| |
|
|
746 |
<xs:simpleContent> |
| |
|
|
747 |
<xs:extension base="xs:string"> |
| |
|
|
748 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
749 |
<xs:attribute name="cde" type="xs:string" default="3086851" /> |
| |
|
|
750 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
751 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
752 |
</xs:extension> |
| |
|
|
753 |
</xs:simpleContent> |
| |
|
|
754 |
</xs:complexType> |
| |
|
|
755 |
</xs:element> |
| |
| |
|
-+ |
757 |
<xs:element name="her2_erbb_pos_finding_cell_percent_category" nillable="true"> |
| |
|
|
758 |
<xs:complexType> |
| |
|
|
759 |
<xs:simpleContent> |
| |
|
|
760 |
<xs:extension base="percentByTens"> |
| |
|
|
761 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
762 |
<xs:attribute name="cde" type="xs:string" default="3086980" /> |
| |
|
|
763 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
764 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
765 |
</xs:extension> |
| |
|
|
766 |
</xs:simpleContent> |
| |
|
|
767 |
</xs:complexType> |
| |
|
|
768 |
</xs:element> |
| |
| |
|
-+ |
770 |
<xs:element name="pos_finding_her2_erbb2_other_measurement_scale_text" nillable="true"> |
| |
|
|
771 |
<xs:complexType> |
| |
|
|
772 |
<xs:simpleContent> |
| |
|
|
773 |
<xs:extension base="xs:string"> |
| |
|
|
774 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
775 |
<xs:attribute name="cde" type="xs:string" default="3087479" /> |
| |
|
|
776 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
777 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
778 |
</xs:extension> |
| |
|
|
779 |
</xs:simpleContent> |
| |
|
|
780 |
</xs:complexType> |
| |
|
|
781 |
</xs:element> |
| |
| |
|
-+ |
783 |
<xs:element name="her2_erbb_method_calculation_method_text" nillable="true"> |
| |
|
|
784 |
<xs:complexType> |
| |
|
|
785 |
<xs:simpleContent> |
| |
|
|
786 |
<xs:extension base="xs:string"> |
| |
|
|
787 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
788 |
<xs:attribute name="cde" type="xs:string" default="3087487" /> |
| |
|
|
789 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
790 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
791 |
</xs:extension> |
| |
|
|
792 |
</xs:simpleContent> |
| |
|
|
793 |
</xs:complexType> |
| |
|
|
794 |
</xs:element> |
| |
| |
|
-+ |
796 |
<xs:element name="her2_neu_and_centromere_17_copy_number_analysis_input_total_number_count" nillable="true"> |
| |
|
|
797 |
<xs:complexType> |
| |
|
|
798 |
<xs:simpleContent> |
| |
|
|
799 |
<xs:extension base="xs:integer"> |
| |
|
|
800 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
801 |
<xs:attribute name="cde" type="xs:string" default="3087902" /> |
| |
|
|
802 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
803 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
804 |
</xs:extension> |
| |
|
|
805 |
</xs:simpleContent> |
| |
|
|
806 |
</xs:complexType> |
| |
|
|
807 |
</xs:element> |
| |
| |
|
-+ |
809 |
<xs:element name="her2_and_centromere_17_positive_finding_other_measurement_scale_text" nillable="true"> |
| |
|
|
810 |
<xs:complexType> |
| |
|
|
811 |
<xs:simpleContent> |
| |
|
|
812 |
<xs:extension base="xs:string"> |
| |
|
|
813 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
814 |
<xs:attribute name="cde" type="xs:string" default="3087923" /> |
| |
|
|
815 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
816 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
817 |
</xs:extension> |
| |
|
|
818 |
</xs:simpleContent> |
| |
|
|
819 |
</xs:complexType> |
| |
|
|
820 |
</xs:element> |
| |
| |
|
-+ |
822 |
<xs:element name="her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text" nillable="true"> |
| |
|
|
823 |
<xs:complexType> |
| |
|
|
824 |
<xs:simpleContent> |
| |
|
|
825 |
<xs:extension base="xs:string"> |
| |
|
|
826 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
827 |
<xs:attribute name="cde" type="xs:string" default="3087929" /> |
| |
| |
|
-+ |
861 |
<xs:element name="fluorescence_in_situ_hybridization_diagnostic_procedure_chromosome_17_signal_result_range" nillable="true"> |
| |
|
|
862 |
<xs:complexType> |
| |
|
|
863 |
<xs:simpleContent> |
| |
|
|
864 |
<xs:extension base="xs:string"> |
| |
|
|
865 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
866 |
<xs:attribute name="cde" type="xs:string" default="3104295" /> |
| |
|
|
867 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
868 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
869 |
</xs:extension> |
| |
|
|
870 |
</xs:simpleContent> |
| |
|
|
871 |
</xs:complexType> |
| |
|
|
872 |
</xs:element> |
| |
| |
|
-+ |
874 |
<xs:element name="tumor_other_histologic_subtype_descriptive_text" nillable="true"> |
| |
|
|
875 |
<xs:complexType> |
| |
|
|
876 |
<xs:simpleContent> |
| |
|
|
877 |
<xs:extension base="xs:string"> |
| |
|
|
878 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
879 |
<xs:attribute name="cde" type="xs:string" default="3124492" /> |
| |
|
|
880 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
881 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
882 |
</xs:extension> |
| |
|
|
883 |
</xs:simpleContent> |
| |
|
|
884 |
</xs:complexType> |
| |
|
|
885 |
</xs:element> |
| |
| 573 |
<xs:element name="distant_metastasis_present_ind2" nillable="true"> |
<> |
953 |
<xs:element name="breast_tumor_clinical_m_stage" nillable="true"> |
| |
|
|
954 |
<xs:complexType mixed="true"> |
| |
|
|
955 |
<xs:simpleContent> |
| |
|
|
956 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
957 |
<xs:enumeration value="" /> |
| |
|
|
958 |
<xs:enumeration value="MX" /> |
| |
|
|
959 |
<xs:enumeration value="M0" /> |
| |
|
|
960 |
<xs:enumeration value="M1" /> |
| |
|
|
961 |
<xs:enumeration value="M1a" /> |
| |
|
|
962 |
<xs:enumeration value="M1b" /> |
| |
|
|
963 |
<xs:enumeration value="M1c" /> |
| |
|
|
964 |
<xs:enumeration value="cM0 (i+)" /> |
| |
|
|
965 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
966 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4.1" /> |
| |
|
|
967 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
968 |
</xs:restriction> |
| |
|
|
969 |
</xs:simpleContent> |
| |
|
|
970 |
</xs:complexType> |
| |
|
|
971 |
</xs:element> |
| |
| |
|
-+ |
973 |
<xs:element name="er_level_cell_percentage_category" nillable="true"> |
| |
| |
|
-+ |
976 |
<xs:extension base="percentByTens"> |
| |
|
|
977 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
978 |
<xs:attribute name="cde" type="xs:string" default="3128341" /> |
| |
|
|
979 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
980 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
981 |
</xs:extension> |
| |
|
|
982 |
</xs:simpleContent> |
| |
|
|
983 |
</xs:complexType> |
| |
|
|
984 |
</xs:element> |
| |
| |
|
-+ |
986 |
<xs:element name="progesterone_receptor_level_cell_percent_category" nillable="true"> |
| |
|
|
987 |
<xs:complexType> |
| |
|
|
988 |
<xs:simpleContent> |
| |
|
|
989 |
<xs:extension base="percentByTens"> |
| |
|
|
990 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
991 |
<xs:attribute name="cde" type="xs:string" default="3128342" /> |
| |
|
|
992 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
993 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
994 |
</xs:extension> |
| |
|
|
995 |
</xs:simpleContent> |
| |
|
|
996 |
</xs:complexType> |
| |
|
|
997 |
</xs:element> |
| |
| |
|
-+ |
999 |
<xs:element name="metastatic_breast_carcinoma_estrogen_receptor_status" nillable="true"> |
| |
|
|
1000 |
<xs:complexType> |
| |
|
|
1001 |
<xs:simpleContent> |
| |
|
|
1002 |
<xs:extension base="posNegStat"> |
| |
|
|
1003 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1004 |
<xs:attribute name="cde" type="xs:string" default="3131865" /> |
| |
|
|
1005 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1006 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1007 |
</xs:extension> |
| |
|
|
1008 |
</xs:simpleContent> |
| |
|
|
1009 |
</xs:complexType> |
| |
|
|
1010 |
</xs:element> |
| |
| |
|
-+ |
1012 |
<xs:element name="metastatic_breast_carcinoma_estrogen_receptor_level_cell_percent_category" nillable="true"> |
| |
|
|
1013 |
<xs:complexType> |
| |
|
|
1014 |
<xs:simpleContent> |
| |
|
|
1015 |
<xs:extension base="percentByTens"> |
| |
|
|
1016 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1017 |
<xs:attribute name="cde" type="xs:string" default="3131869" /> |
| |
|
|
1018 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1019 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1020 |
</xs:extension> |
| |
|
|
1021 |
</xs:simpleContent> |
| |
|
|
1022 |
</xs:complexType> |
| |
|
|
1023 |
</xs:element> |
| |
| |
|
-+ |
1025 |
<xs:element name="metastatic_breast_carcinoma_immunohistochemistry_er_pos_cell_score" nillable="true"> |
| |
|
|
1026 |
<xs:complexType> |
| |
|
|
1027 |
<xs:simpleContent> |
| |
|
|
1028 |
<xs:extension base="onePlusToFourPlus"> |
| |
|
|
1029 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1030 |
<xs:attribute name="cde" type="xs:string" default="3131873" /> |
| |
|
|
1031 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1032 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1033 |
</xs:extension> |
| |
|
|
1034 |
</xs:simpleContent> |
| |
|
|
1035 |
</xs:complexType> |
| |
|
|
1036 |
</xs:element> |
| |
| |
|
-+ |
1038 |
<xs:element name="pos_finding_metastatic_breast_carcinoma_estrogen_receptor_other_measuremenet_scale_text" nillable="true"> |
| |
|
|
1039 |
<xs:complexType> |
| |
|
|
1040 |
<xs:simpleContent> |
| |
|
|
1041 |
<xs:extension base="xs:string"> |
| |
|
|
1042 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1043 |
<xs:attribute name="cde" type="xs:string" default="3131877" /> |
| |
|
|
1044 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1045 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1046 |
</xs:extension> |
| |
|
|
1047 |
</xs:simpleContent> |
| |
|
|
1048 |
</xs:complexType> |
| |
|
|
1049 |
</xs:element> |
| |
| |
|
-+ |
1051 |
<xs:element name="metastatic_breast_carcinoma_estrogen_receptor_detection_method_text" nillable="true"> |
| |
|
|
1052 |
<xs:complexType> |
| |
|
|
1053 |
<xs:simpleContent> |
| |
|
|
1054 |
<xs:extension base="xs:string"> |
| |
|
|
1055 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1056 |
<xs:attribute name="cde" type="xs:string" default="3131881" /> |
| |
|
|
1057 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1058 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1059 |
</xs:extension> |
| |
|
|
1060 |
</xs:simpleContent> |
| |
|
|
1061 |
</xs:complexType> |
| |
|
|
1062 |
</xs:element> |
| |
| |
|
-+ |
1064 |
<xs:element name="metastatic_breast_carcinoma_progesterone_receptor_status" nillable="true"> |
| |
|
|
1065 |
<xs:complexType> |
| |
|
|
1066 |
<xs:simpleContent> |
| |
|
|
1067 |
<xs:extension base="posNegStat"> |
| |
|
|
1068 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1069 |
<xs:attribute name="cde" type="xs:string" default="3131884" /> |
| |
|
|
1070 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1071 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1072 |
</xs:extension> |
| |
|
|
1073 |
</xs:simpleContent> |
| |
|
|
1074 |
</xs:complexType> |
| |
|
|
1075 |
</xs:element> |
| |
| |
|
-+ |
1077 |
<xs:element name="metastatic_breast_carcinoma_lab_proc_her2_neu_immunohistochemistry_receptor_status" nillable="true"> |
| |
|
|
1078 |
<xs:complexType> |
| |
|
|
1079 |
<xs:simpleContent> |
| |
|
|
1080 |
<xs:extension base="posNegStat"> |
| |
|
|
1081 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1082 |
<xs:attribute name="cde" type="xs:string" default="3131997" /> |
| |
|
|
1083 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1084 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1085 |
</xs:extension> |
| |
|
|
1086 |
</xs:simpleContent> |
| |
|
|
1087 |
</xs:complexType> |
| |
|
|
1088 |
</xs:element> |
| |
| |
|
-+ |
1090 |
<xs:element name="metastatic_breast_carcinoma_progesterone_receptor_level_cell_percent_category" nillable="true"> |
| |
|
|
1091 |
<xs:complexType> |
| |
|
|
1092 |
<xs:simpleContent> |
| |
|
|
1093 |
<xs:extension base="percentByTens"> |
| |
|
|
1094 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1095 |
<xs:attribute name="cde" type="xs:string" default="3131891" /> |
| |
|
|
1096 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1097 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1098 |
</xs:extension> |
| |
|
|
1099 |
</xs:simpleContent> |
| |
|
|
1100 |
</xs:complexType> |
| |
|
|
1101 |
</xs:element> |
| |
| |
|
-+ |
1103 |
<xs:element name="metastatic_breast_carcinoma_immunohistochemistry_pr_pos_cell_score" nillable="true"> |
| |
|
|
1104 |
<xs:complexType> |
| |
|
|
1105 |
<xs:simpleContent> |
| |
|
|
1106 |
<xs:extension base="onePlusToFourPlus"> |
| |
|
|
1107 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1108 |
<xs:attribute name="cde" type="xs:string" default="3131988" /> |
| |
|
|
1109 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1110 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1111 |
</xs:extension> |
| |
|
|
1112 |
</xs:simpleContent> |
| |
|
|
1113 |
</xs:complexType> |
| |
|
|
1114 |
</xs:element> |
| |
| |
|
-+ |
1116 |
<xs:element name="metastatic_breast_carcinoma_pos_finding_progesterone_receptor_other_measure_scale_text" nillable="true"> |
| |
|
|
1117 |
<xs:complexType> |
| |
|
|
1118 |
<xs:simpleContent> |
| |
|
|
1119 |
<xs:extension base="xs:string"> |
| |
|
|
1120 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1121 |
<xs:attribute name="cde" type="xs:string" default="3131992" /> |
| |
|
|
1122 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1123 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1124 |
</xs:extension> |
| |
|
|
1125 |
</xs:simpleContent> |
| |
|
|
1126 |
</xs:complexType> |
| |
|
|
1127 |
</xs:element> |
| |
| |
|
-+ |
1129 |
<xs:element name="metastatic_breast_carcinoma_progesterone_receptor_detection_method_text" nillable="true"> |
| |
|
|
1130 |
<xs:complexType> |
| |
|
|
1131 |
<xs:simpleContent> |
| |
|
|
1132 |
<xs:extension base="xs:string"> |
| |
|
|
1133 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1134 |
<xs:attribute name="cde" type="xs:string" default="3131993" /> |
| |
|
|
1135 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1136 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1137 |
</xs:extension> |
| |
|
|
1138 |
</xs:simpleContent> |
| |
|
|
1139 |
</xs:complexType> |
| |
|
|
1140 |
</xs:element> |
| |
| |
|
-+ |
1142 |
<xs:element name="metastatic_breast_carcinoma_her2_erbb_pos_finding_cell_percent_category" nillable="true"> |
| |
|
|
1143 |
<xs:complexType> |
| |
|
|
1144 |
<xs:simpleContent> |
| |
|
|
1145 |
<xs:extension base="percentByTens"> |
| |
|
|
1146 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1147 |
<xs:attribute name="cde" type="xs:string" default="3132322" /> |
| |
|
|
1148 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1149 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1150 |
</xs:extension> |
| |
|
|
1151 |
</xs:simpleContent> |
| |
|
|
1152 |
</xs:complexType> |
| |
|
|
1153 |
</xs:element> |
| |
| |
|
-+ |
1155 |
<xs:element name="metastatic_breast_carcinoma_erbb2_immunohistochemistry_level_result" nillable="true"> |
| |
|
|
1156 |
<xs:complexType> |
| |
|
|
1157 |
<xs:simpleContent> |
| |
|
|
1158 |
<xs:extension base="onePlusToFourPlus"> |
| |
|
|
1159 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1160 |
<xs:attribute name="cde" type="xs:string" default="3132444" /> |
| |
|
|
1161 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1162 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1163 |
</xs:extension> |
| |
|
|
1164 |
</xs:simpleContent> |
| |
|
|
1165 |
</xs:complexType> |
| |
|
|
1166 |
</xs:element> |
| |
| |
|
-+ |
1168 |
<xs:element name="metastatic_breast_carcinoma_pos_finding_her2_erbb2_other_measure_scale_text" nillable="true"> |
| |
|
|
1169 |
<xs:complexType> |
| |
|
|
1170 |
<xs:simpleContent> |
| |
|
|
1171 |
<xs:extension base="xs:string"> |
| |
|
|
1172 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1173 |
<xs:attribute name="cde" type="xs:string" default="3132448" /> |
| |
|
|
1174 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1175 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1176 |
</xs:extension> |
| |
|
|
1177 |
</xs:simpleContent> |
| |
|
|
1178 |
</xs:complexType> |
| |
|
|
1179 |
</xs:element> |
| |
| |
|
-+ |
1181 |
<xs:element name="metastatic_breast_carcinoma_her2_erbb_method_calculation_method_text" nillable="true"> |
| |
|
|
1182 |
<xs:complexType> |
| |
|
|
1183 |
<xs:simpleContent> |
| |
|
|
1184 |
<xs:extension base="xs:string"> |
| |
|
|
1185 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1186 |
<xs:attribute name="cde" type="xs:string" default="3132452" /> |
| |
|
|
1187 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1188 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1189 |
</xs:extension> |
| |
|
|
1190 |
</xs:simpleContent> |
| |
|
|
1191 |
</xs:complexType> |
| |
|
|
1192 |
</xs:element> |
| |
| |
|
-+ |
1194 |
<xs:element name="metastatic_breast_carcinoma_lab_proc_her2_neu_in_situ_hybridization_outcome_type" nillable="true"> |
| |
|
|
1195 |
<xs:complexType> |
| |
|
|
1196 |
<xs:simpleContent> |
| |
|
|
1197 |
<xs:extension base="posNegStat"> |
| |
|
|
1198 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1199 |
<xs:attribute name="cde" type="xs:string" default="3132455" /> |
| |
|
|
1200 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1201 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1202 |
</xs:extension> |
| |
|
|
1203 |
</xs:simpleContent> |
| |
|
|
1204 |
</xs:complexType> |
| |
|
|
1205 |
</xs:element> |
| |
| |
|
-+ |
1207 |
<xs:element name="metastatic_breast_carcinoma_fluorescence_in_situ_hybridization_diagnostic_proc_centromere_17_signal_result_range" nillable="true"> |
| |
|
|
1208 |
<xs:complexType> |
| |
|
|
1209 |
<xs:simpleContent> |
| |
|
|
1210 |
<xs:extension base="xs:string"> |
| |
|
|
1211 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1212 |
<xs:attribute name="cde" type="xs:string" default="3132887" /> |
| |
|
|
1213 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1214 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1215 |
</xs:extension> |
| |
|
|
1216 |
</xs:simpleContent> |
| |
|
|
1217 |
</xs:complexType> |
| |
|
|
1218 |
</xs:element> |
| |
| |
|
<> |
1220 |
<xs:element name="her2_neu_and_centromere_17_copy_number_metastatic_breast_carcinoma_analysis_input_total_number_count" nillable="true"> |
| |
|
|
1221 |
<xs:complexType> |
| |
|
|
1222 |
<xs:simpleContent> |
| 576 |
<xs:extension base="utility:yes_or_no"> |
|
1223 |
<xs:extension base="xs:integer"> |
| |
| 578 |
<xs:attribute name="cde" type="xs:string" default="2194698" /> |
<> |
1225 |
<xs:attribute name="cde" type="xs:string" default="3132899" /> |
| 579 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
1226 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
| |
|
-+ |
1233 |
<xs:element name="metastatic_breast_carcinoma_her2_neu_chromosone_17_signal_ratio_value" nillable="true"> |
| |
|
|
1234 |
<xs:complexType> |
| |
|
|
1235 |
<xs:simpleContent> |
| |
|
|
1236 |
<xs:extension base="xs:decimal"> |
| |
|
|
1237 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1238 |
<xs:attribute name="cde" type="xs:string" default="3132903" /> |
| |
|
|
1239 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1240 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1241 |
</xs:extension> |
| |
|
|
1242 |
</xs:simpleContent> |
| |
|
|
1243 |
</xs:complexType> |
| |
|
|
1244 |
</xs:element> |
| |
| 586 |
<xs:element name="breast_carcinoma_immunohistochemistry_progesterone_receptor_pos_finding_scale" nillable="true"> |
<> |
1246 |
<xs:element name="metastatic_breast_carcinoma_pos_finding_other_scale_measurement_text" nillable="true"> |
| |
|
|
1247 |
<xs:complexType> |
| |
|
|
1248 |
<xs:simpleContent> |
| |
|
|
1249 |
<xs:extension base="xs:string"> |
| |
|
|
1250 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1251 |
<xs:attribute name="cde" type="xs:string" default="3132907" /> |
| |
|
|
1252 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1253 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1254 |
</xs:extension> |
| |
|
|
1255 |
</xs:simpleContent> |
| |
|
|
1256 |
</xs:complexType> |
| |
|
|
1257 |
</xs:element> |
| |
| |
|
-+ |
1259 |
<xs:element name="metastatic_breast_carcinoma_her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text" nillable="true"> |
| |
|
|
1260 |
<xs:complexType> |
| |
|
|
1261 |
<xs:simpleContent> |
| |
|
|
1262 |
<xs:extension base="xs:string"> |
| |
|
|
1263 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1264 |
<xs:attribute name="cde" type="xs:string" default="3132910" /> |
| |
|
|
1265 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1266 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1267 |
</xs:extension> |
| |
|
|
1268 |
</xs:simpleContent> |
| |
|
|
1269 |
</xs:complexType> |
| |
|
|
1270 |
</xs:element> |
| |
| |
|
-+ |
1272 |
<xs:element name="her2_neu_metastatic_breast_carcinoma_copy_analysis_input_total_number" nillable="true"> |
| |
|
|
1273 |
<xs:complexType> |
| |
|
|
1274 |
<xs:simpleContent> |
| |
|
|
1275 |
<xs:extension base="xs:string"> |
| |
|
|
1276 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1277 |
<xs:attribute name="cde" type="xs:string" default="3133734" /> |
| |
|
|
1278 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1279 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1280 |
</xs:extension> |
| |
|
|
1281 |
</xs:simpleContent> |
| |
|
|
1282 |
</xs:complexType> |
| |
|
|
1283 |
</xs:element> |
| |
| |
|
-+ |
1285 |
<xs:element name="her2_neu_breast_carcinoma_copy_analysis_input_total_number" nillable="true"> |
| |
|
|
1286 |
<xs:complexType> |
| |
|
|
1287 |
<xs:simpleContent> |
| |
|
|
1288 |
<xs:extension base="xs:string"> |
| |
|
|
1289 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1290 |
<xs:attribute name="cde" type="xs:string" default="3133738" /> |
| |
|
|
1291 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1292 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1293 |
</xs:extension> |
| |
|
|
1294 |
</xs:simpleContent> |
| |
|
|
1295 |
</xs:complexType> |
| |
|
|
1296 |
</xs:element> |
| |
| |
|
-+ |
1298 |
<xs:element name="breast_carcinoma_immunohistochemistry_pos_cell_score" nillable="true"> |
| |
|
|
1299 |
<xs:complexType> |
| |
|
|
1300 |
<xs:simpleContent> |
| |
|
|
1301 |
<xs:extension base="onePlusToFourPlus"> |
| |
|
|
1302 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1303 |
<xs:attribute name="cde" type="xs:string" default="3133874" /> |
| |
|
|
1304 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
1305 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1306 |
</xs:extension> |
| |
|
|
1307 |
</xs:simpleContent> |
| |
|
|
1308 |
</xs:complexType> |
| |
|
|
1309 |
</xs:element> |
| |
| |
|
-+ |
1311 |
<xs:element name="breast_tumor_pathologic_grouping_stage" nillable="true"> |
| |
| 591 |
<xs:enumeration value="4 Point Scale" /> |
<> |
1316 |
<xs:enumeration value="Stage X" /> |
| 592 |
<xs:enumeration value="3 Point Scale" /> |
|
1317 |
<xs:enumeration value="Stage Tis" /> |
| |
|
|
1318 |
<xs:enumeration value="Stage 0" /> |
| |
|
|
1319 |
<xs:enumeration value="Stage I" /> |
| |
|
|
1320 |
<xs:enumeration value="Stage IA" /> |
| |
|
|
1321 |
<xs:enumeration value="Stage IB" /> |
| |
|
|
1322 |
<xs:enumeration value="Stage II" /> |
| |
|
|
1323 |
<xs:enumeration value="Stage IIA" /> |
| |
|
|
1324 |
<xs:enumeration value="Stage IIB" /> |
| |
|
|
1325 |
<xs:enumeration value="Stage IIC" /> |
| |
|
|
1326 |
<xs:enumeration value="Stage III" /> |
| |
|
|
1327 |
<xs:enumeration value="Stage IIIA" /> |
| |
|
|
1328 |
<xs:enumeration value="Stage IIIB" /> |
| |
|
|
1329 |
<xs:enumeration value="Stage IIIC" /> |
| |
|
|
1330 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
1331 |
<xs:enumeration value="Stage IVA" /> |
| |
|
|
1332 |
<xs:enumeration value="Stage IVB" /> |
| |
|
|
1333 |
<xs:enumeration value="Stage IIA Cervix" /> |
| |
|
|
1334 |
<xs:enumeration value="Stage II Cervix" /> |
| |
|
|
1335 |
<xs:enumeration value="Stage IB2" /> |
| |
|
|
1336 |
<xs:enumeration value="Stage IB1" /> |
| |
|
|
1337 |
<xs:enumeration value="Stage IB Cervix" /> |
| |
|
|
1338 |
<xs:enumeration value="Stage IA2" /> |
| |
|
|
1339 |
<xs:enumeration value="Stage IA1" /> |
| |
|
|
1340 |
<xs:enumeration value="Stage IVC" /> |
| 593 |
<xs:attribute name="cde" type="xs:string" default="3203083" /> |
|
1341 |
<xs:attribute name="cde" type="xs:string" default="3203222" /> |
| |
| |
|
-+ |
1349 |
<xs:simpleType name="percentByTens"> |
| |
|
|
1350 |
<xs:restriction base="xs:string"> |
| |
|
|
1351 |
<xs:enumeration value="<10%" /> |
| |
|
|
1352 |
<xs:enumeration value="10-19%" /> |
| |
|
|
1353 |
<xs:enumeration value="20-29%" /> |
| |
|
|
1354 |
<xs:enumeration value="30-39%" /> |
| |
|
|
1355 |
<xs:enumeration value="40-49%" /> |
| |
|
|
1356 |
<xs:enumeration value="50-59%" /> |
| |
|
|
1357 |
<xs:enumeration value="60-69%" /> |
| |
|
|
1358 |
<xs:enumeration value="70-79%" /> |
| |
|
|
1359 |
<xs:enumeration value="80-89%" /> |
| |
|
|
1360 |
<xs:enumeration value="90-99%" /> |
| |
|
|
1361 |
<xs:enumeration value="90-100%" /> |
| |
|
|
1362 |
<xs:enumeration value="" /> |
| |
|
|
1363 |
</xs:restriction> |
| |
|
|
1364 |
</xs:simpleType> |
| |
| |
|
-+ |
1376 |
</xs:restriction> |
| |
|
|
1377 |
</xs:simpleType> |
| |
| |
|
-+ |
1379 |
<xs:simpleType name="posNegClose"> |
| |
|
|
1380 |
<xs:restriction base="xs:string"> |
| |
|
|
1381 |
<xs:enumeration value="" /> |
| |
|
|
1382 |
<xs:enumeration value="Positive" /> |
| |
|
|
1383 |
<xs:enumeration value="Negative" /> |
| |
|
|
1384 |
<xs:enumeration value="Close" /> |
| |
|
|
1385 |
</xs:restriction> |
| |
|
|
1386 |
</xs:simpleType> |
| |
| |
|
-+ |
1388 |
<xs:simpleType name="onePlusToFourPlus"> |
| |
|
|
1389 |
<xs:restriction base="xs:string"> |
| |
|
|
1390 |
<xs:enumeration value="" /> |
| |
|
|
1391 |
<xs:enumeration value="0" /> |
| |
|
|
1392 |
<xs:enumeration value="1+" /> |
| |
|
|
1393 |
<xs:enumeration value="2+" /> |
| |
|
|
1394 |
<xs:enumeration value="3+" /> |
| |
|
|
1395 |
<xs:enumeration value="4+" /> |
| 1 |
<?xml version="1.0" encoding="utf-8" ?> |
+- |
|
|
| |
| 3 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
+- |
|
|
| 4 |
xmlns:xs="http://www.w3.org/2001/XMLSchema" |
|
|
|
| 5 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
|
|
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
|
|
|
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
|
|
| 8 |
xmlns:brca_shared="http://tcga.nci/bcr/xml/clinical/brca/shared/2.5" |
|
|
|
| 9 |
xmlns="http://tcga.nci/bcr/xml/clinical/brca/followup/2.5/1.5" |
|
|
|
| 10 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/brca/followup/2.5/1.5" |
|
|
|
| 11 |
xmlns:jaxb="http://java.sun.com/xml/ns/jaxb" jaxb:version="1.0" > |
|
|
|
| |
| 13 |
<xs:import schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" namespace="http://tcga.nci/bcr/xml/utility/2.5" /> |
+- |
|
|
| 14 |
<xs:import schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" namespace="http://tcga.nci/bcr/xml/administration/2.5" /> |
|
|
|
| 15 |
<xs:import schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" /> |
|
|
|
| 16 |
<xs:import schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/brca/shared/2.5/TCGA_BCR.BRCA_Clinical_Shared_Datatypes.xsd" namespace="http://tcga.nci/bcr/xml/clinical/brca/shared/2.5" /> |
|
|
|
| 17 |
<xs:annotation> |
|
|
|
| 18 |
<xs:appinfo> |
|
|
|
| 19 |
<jaxb:globalBindings generateIsSetMethod="true" /> |
|
|
|
| 20 |
<jaxb:schemaBindings> |
|
|
|
| 21 |
<jaxb:package name="nci.tcga.bcr.xml.jaxb.clinical.brca" /> |
|
|
|
| 22 |
</jaxb:schemaBindings> |
|
|
|
| 23 |
</xs:appinfo> |
|
|
|
| 24 |
</xs:annotation> |
|
|
|
| 25 |
<xs:annotation> |
|
|
|
| 26 |
<xs:documentation xml:lang="en">Schema to define the elements of the TCGA Clinical Data Follow-up Form within the BRCA study.</xs:documentation> |
|
|
|
| 27 |
</xs:annotation> |
|
|
|
| 28 |
<xs:element name="follow_up_v1.5"> |
|
|
|
| 29 |
<xs:complexType> |
|
|
|
| 30 |
<xs:sequence> |
|
|
|
| 31 |
<xs:element ref="shared:bcr_patient_barcode" /> |
|
|
|
| 32 |
<xs:element ref="shared:bcr_patient_uuid" /> |
|
|
|
| 33 |
<xs:choice> |
|
|
|
| 34 |
<xs:annotation> |
|
|
|
| 35 |
<xs:documentation> |
|
|
|
| 36 |
Data for the DATE_of_last_followup elements are also asked on the |
|
|
|
| 37 |
TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| 38 |
</xs:documentation> |
|
|
|
| 39 |
</xs:annotation> |
|
|
|
| 40 |
<xs:sequence> |
|
|
|
| 41 |
<xs:element ref="shared:day_of_last_followup" /> |
|
|
|
| 42 |
<xs:element ref="shared:month_of_last_followup" /> |
|
|
|
| 43 |
<xs:element ref="shared:year_of_last_followup" /> |
|
|
|
| 44 |
</xs:sequence> |
|
|
|
| 45 |
<xs:element ref="shared:days_to_last_followup" /> |
|
|
|
| 46 |
</xs:choice> |
|
|
|
| 47 |
<xs:element ref="shared:vital_status"> |
|
|
|
| 48 |
<xs:annotation> |
|
|
|
| 49 |
<xs:documentation> |
|
|
|
| 50 |
Data for the vital_status element is also asked on the |
|
|
|
| 51 |
TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| 52 |
</xs:documentation> |
|
|
|
| 53 |
</xs:annotation> |
|
|
|
| 54 |
</xs:element> |
|
|
|
| 55 |
<xs:element ref="shared:person_neoplasm_cancer_status"> |
|
|
|
| 56 |
<xs:annotation> |
|
|
|
| 57 |
<xs:documentation> |
|
|
|
| 58 |
Data for the DATE_of_person_neoplasm_cancer_status elements are also asked on the |
|
|
|
| 59 |
TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| 60 |
</xs:documentation> |
|
|
|
| 61 |
</xs:annotation> |
|
|
|
| 62 |
</xs:element> |
|
|
|
| 63 |
<xs:choice> |
|
|
|
| 64 |
<xs:annotation> |
|
|
|
| 65 |
<xs:documentation> |
|
|
|
| 66 |
Data for the DATE_of_last_known_alive element is also asked on the |
|
|
|
| 67 |
TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 69 |
DEPRECATED: |
+- |
|
|
| 70 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 71 |
within the BRCA study. |
|
|
|
| 72 |
</xs:documentation> |
|
|
|
| 73 |
</xs:annotation> |
|
|
|
| 74 |
<xs:sequence> |
|
|
|
| 75 |
<xs:element ref="shared:day_of_last_known_alive" /> |
|
|
|
| 76 |
<xs:element ref="shared:month_of_last_known_alive" /> |
|
|
|
| 77 |
<xs:element ref="shared:year_of_last_known_alive" /> |
|
|
|
| 78 |
</xs:sequence> |
|
|
|
| 79 |
<xs:element ref="shared:days_to_last_known_alive" /> |
|
|
|
| 80 |
</xs:choice> |
|
|
|
| 81 |
<xs:choice> |
|
|
|
| 82 |
<xs:annotation> |
|
|
|
| 83 |
<xs:documentation> |
|
|
|
| 84 |
Data for the DATE_of_death elements are also asked on the |
|
|
|
| 85 |
TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| 86 |
</xs:documentation> |
|
|
|
| 87 |
</xs:annotation> |
|
|
|
| 88 |
<xs:sequence> |
|
|
|
| 89 |
<xs:element ref="shared:day_of_death" /> |
|
|
|
| 90 |
<xs:element ref="shared:month_of_death" /> |
|
|
|
| 91 |
<xs:element ref="shared:year_of_death" /> |
|
|
|
| 92 |
</xs:sequence> |
|
|
|
| 93 |
<xs:element ref="shared:days_to_death" /> |
|
|
|
| 94 |
</xs:choice> |
|
|
|
| 95 |
<xs:element ref="shared:radiation_therapy" /> |
|
|
|
| 96 |
<xs:element ref="shared:targeted_molecular_therapy" /> |
|
|
|
| 97 |
<xs:choice> |
|
|
|
| 98 |
<xs:sequence> |
|
|
|
| 99 |
<xs:element ref="shared:day_of_new_tumor_event_after_initial_treatment" /> |
|
|
|
| 100 |
<xs:element ref="shared:month_of_new_tumor_event_after_initial_treatment" /> |
|
|
|
| 101 |
<xs:element ref="shared:year_of_new_tumor_event_after_initial_treatment" /> |
|
|
|
| 102 |
</xs:sequence> |
|
|
|
| 103 |
<xs:element ref="shared:days_to_new_tumor_event_after_initial_treatment" /> |
|
|
|
| 104 |
</xs:choice> |
|
|
|
| 105 |
<xs:element ref="shared:additional_surgery_locoregional_procedure" /> |
|
|
|
| 106 |
<xs:choice> |
|
|
|
| 107 |
<xs:annotation> |
|
|
|
| 108 |
<xs:documentation> |
|
|
|
| 109 |
DEPRECATED: |
|
|
|
| 110 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 111 |
within the BRCA study. |
|
|
|
| 112 |
</xs:documentation> |
|
|
|
| 113 |
</xs:annotation> |
|
|
|
| 114 |
<xs:sequence> |
|
|
|
| 115 |
<xs:element ref="shared:day_of_additional_surgery_locoregional_procedure" /> |
|
|
|
| 116 |
<xs:element ref="shared:month_of_additional_surgery_locoregional_procedure" /> |
|
|
|
| 117 |
<xs:element ref="shared:year_of_additional_surgery_locoregional_procedure" /> |
|
|
|
| 118 |
</xs:sequence> |
|
|
|
| 119 |
<xs:element ref="shared:days_to_additional_surgery_locoregional_procedure" /> |
|
|
|
| 120 |
</xs:choice> |
|
|
|
| 121 |
<xs:element ref="brca_shared:breast_carcinoma_estrogen_receptor_status"> |
|
|
|
| 122 |
<xs:annotation> |
|
|
|
| 123 |
<xs:documentation> |
|
|
|
| 124 |
Data for the brca_shared:breast_carcinoma_estrogen_receptor_status element is also asked |
|
|
|
| 125 |
on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 127 |
DEPRECATED: |
+- |
|
|
| 128 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 129 |
within the BRCA study. |
|
|
|
| 130 |
</xs:documentation> |
|
|
|
| 131 |
</xs:annotation> |
|
|
|
| 132 |
</xs:element> |
|
|
|
| 133 |
<xs:element ref="brca_shared:er_level_cell_percentage_category"> |
|
|
|
| 134 |
<xs:annotation> |
|
|
|
| 135 |
<xs:documentation> |
|
|
|
| 136 |
Data for the brca_shared:er_level_cell_percentage_category element is also asked |
|
|
|
| 137 |
on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 139 |
DEPRECATED: |
+- |
|
|
| 140 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 141 |
within the BRCA study. |
|
|
|
| 142 |
</xs:documentation> |
|
|
|
| 143 |
</xs:annotation> |
|
|
|
| 144 |
</xs:element> |
|
|
|
| 145 |
<xs:element ref="brca_shared:immunohistochemistry_positive_cell_score"> |
|
|
|
| 146 |
<xs:annotation> |
|
|
|
| 147 |
<xs:documentation> |
|
|
|
| 148 |
Data for the brca_shared:immunohistochemistry_positive_cell_score element is also asked |
|
|
|
| 149 |
on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 151 |
DEPRECATED: |
+- |
|
|
| 152 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 153 |
within the BRCA study. |
|
|
|
| 154 |
</xs:documentation> |
|
|
|
| 155 |
</xs:annotation> |
|
|
|
| 156 |
</xs:element> |
|
|
|
| 157 |
<xs:element ref="brca_shared:positive_finding_estrogen_receptor_other_measurement_scale_text"> |
|
|
|
| 158 |
<xs:annotation> |
|
|
|
| 159 |
<xs:documentation> |
|
|
|
| 160 |
Data for the brca_shared:positive_finding_estrogen_receptor_other_measurement_scale_text element |
|
|
|
| 161 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 163 |
DEPRECATED: |
+- |
|
|
| 164 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 165 |
within the BRCA study. |
|
|
|
| 166 |
</xs:documentation> |
|
|
|
| 167 |
</xs:annotation> |
|
|
|
| 168 |
</xs:element> |
|
|
|
| 169 |
<xs:element ref="brca_shared:er_detection_method_text"> |
|
|
|
| 170 |
<xs:annotation> |
|
|
|
| 171 |
<xs:documentation> |
|
|
|
| 172 |
Data for the brca_shared:er_detection_method_text element is also asked on the |
|
|
|
| 173 |
TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 175 |
DEPRECATED: |
+- |
|
|
| 176 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 177 |
within the BRCA study. |
|
|
|
| 178 |
</xs:documentation> |
|
|
|
| 179 |
</xs:annotation> |
|
|
|
| 180 |
</xs:element> |
|
|
|
| 181 |
<xs:element ref="brca_shared:breast_carcinoma_progesterone_receptor_status"> |
|
|
|
| 182 |
<xs:annotation> |
|
|
|
| 183 |
<xs:documentation> |
|
|
|
| 184 |
Data for the brca_shared:breast_carcinoma_progesterone_receptor_status element |
|
|
|
| 185 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 187 |
DEPRECATED: |
+- |
|
|
| 188 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 189 |
within the BRCA study. |
|
|
|
| 190 |
</xs:documentation> |
|
|
|
| 191 |
</xs:annotation> |
|
|
|
| 192 |
</xs:element> |
|
|
|
| 193 |
<xs:element ref="brca_shared:progesterone_receptor_level_cell_percent_category"> |
|
|
|
| 194 |
<xs:annotation> |
|
|
|
| 195 |
<xs:documentation> |
|
|
|
| 196 |
Data for the brca_shared:progesterone_receptor_level_cell_percent_category element |
|
|
|
| 197 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 199 |
DEPRECATED: |
+- |
|
|
| 200 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 201 |
within the BRCA study. |
|
|
|
| 202 |
</xs:documentation> |
|
|
|
| 203 |
</xs:annotation> |
|
|
|
| 204 |
</xs:element> |
|
|
|
| 205 |
<xs:element ref="brca_shared:breast_carcinoma_immunohistochemistry_pos_cell_score"> |
|
|
|
| 206 |
<xs:annotation> |
|
|
|
| 207 |
<xs:documentation> |
|
|
|
| 208 |
Data for the brca_shared:breast_carcinoma_immunohistochemistry_pos_cell_score element |
|
|
|
| 209 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 211 |
DEPRECATED: |
+- |
|
|
| 212 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 213 |
within the BRCA study. |
|
|
|
| 214 |
</xs:documentation> |
|
|
|
| 215 |
</xs:annotation> |
|
|
|
| 216 |
</xs:element> |
|
|
|
| 217 |
<xs:element ref="brca_shared:pos_finding_progesterone_receptor_other_measurement_scale_text"> |
|
|
|
| 218 |
<xs:annotation> |
|
|
|
| 219 |
<xs:documentation> |
|
|
|
| 220 |
Data for the brca_shared:pos_finding_progesterone_receptor_other_measurement_scale_text element |
|
|
|
| 221 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 223 |
DEPRECATED: |
+- |
|
|
| 224 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 225 |
within the BRCA study. |
|
|
|
| 226 |
</xs:documentation> |
|
|
|
| 227 |
</xs:annotation> |
|
|
|
| 228 |
</xs:element> |
|
|
|
| 229 |
<xs:element ref="brca_shared:pgr_detection_method_text"> |
|
|
|
| 230 |
<xs:annotation> |
|
|
|
| 231 |
<xs:documentation> |
|
|
|
| 232 |
Data for the brca_shared:pgr_detection_method_text element is also asked on the |
|
|
|
| 233 |
TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 235 |
DEPRECATED: |
+- |
|
|
| 236 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 237 |
within the BRCA study. |
|
|
|
| 238 |
</xs:documentation> |
|
|
|
| 239 |
</xs:annotation> |
|
|
|
| 240 |
</xs:element> |
|
|
|
| 241 |
<xs:element ref="brca_shared:lab_proc_her2_neu_immunohistochemistry_receptor_status"> |
|
|
|
| 242 |
<xs:annotation> |
|
|
|
| 243 |
<xs:documentation> |
|
|
|
| 244 |
Data for the brca_shared:lab_proc_her2_neu_immunohistochemistry_receptor_status element |
|
|
|
| 245 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 247 |
DEPRECATED: |
+- |
|
|
| 248 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 249 |
within the BRCA study. |
|
|
|
| 250 |
</xs:documentation> |
|
|
|
| 251 |
</xs:annotation> |
|
|
|
| 252 |
</xs:element> |
|
|
|
| 253 |
<xs:element ref="brca_shared:her2_erbb_pos_finding_cell_percent_category"> |
|
|
|
| 254 |
<xs:annotation> |
|
|
|
| 255 |
<xs:documentation> |
|
|
|
| 256 |
Data for the brca_shared:her2_erbb_pos_finding_cell_percent_category element is also asked |
|
|
|
| 257 |
on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 259 |
DEPRECATED: |
+- |
|
|
| 260 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 261 |
within the BRCA study. |
|
|
|
| 262 |
</xs:documentation> |
|
|
|
| 263 |
</xs:annotation> |
|
|
|
| 264 |
</xs:element> |
|
|
|
| 265 |
<xs:element ref="brca_shared:her2_immunohistochemistry_level_result"> |
|
|
|
| 266 |
<xs:annotation> |
|
|
|
| 267 |
<xs:documentation> |
|
|
|
| 268 |
Data for the brca_shared:immunohistochemistry_positive_cell_score element is also asked |
|
|
|
| 269 |
on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 271 |
DEPRECATED: |
+- |
|
|
| 272 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 273 |
within the BRCA study. |
|
|
|
| 274 |
</xs:documentation> |
|
|
|
| 275 |
</xs:annotation> |
|
|
|
| 276 |
</xs:element> |
|
|
|
| 277 |
<xs:element ref="brca_shared:pos_finding_her2_erbb2_other_measurement_scale_text"> |
|
|
|
| 278 |
<xs:annotation> |
|
|
|
| 279 |
<xs:documentation> |
|
|
|
| 280 |
Data for the brca_shared:pos_finding_her2_erbb2_other_measurement_scale_text element |
|
|
|
| 281 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 283 |
DEPRECATED: |
+- |
|
|
| 284 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 285 |
within the BRCA study. |
|
|
|
| 286 |
</xs:documentation> |
|
|
|
| 287 |
</xs:annotation> |
|
|
|
| 288 |
</xs:element> |
|
|
|
| 289 |
<xs:element ref="brca_shared:her2_erbb_method_calculation_method_text"> |
|
|
|
| 290 |
<xs:annotation> |
|
|
|
| 291 |
<xs:documentation> |
|
|
|
| 292 |
Data for the brca_shared:her2_erbb_method_calculation_method_text element |
|
|
|
| 293 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 295 |
DEPRECATED: |
+- |
|
|
| 296 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 297 |
within the BRCA study. |
|
|
|
| 298 |
</xs:documentation> |
|
|
|
| 299 |
</xs:annotation> |
|
|
|
| 300 |
</xs:element> |
|
|
|
| 301 |
<xs:element ref="brca_shared:lab_procedure_her2_neu_in_situ_hybrid_outcome_type"> |
|
|
|
| 302 |
<xs:annotation> |
|
|
|
| 303 |
<xs:documentation> |
|
|
|
| 304 |
Data for the brca_shared:lab_procedure_her2_neu_in_situ_hybrid_outcome_type element |
|
|
|
| 305 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 307 |
DEPRECATED: |
+- |
|
|
| 308 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 309 |
within the BRCA study. |
|
|
|
| 310 |
</xs:documentation> |
|
|
|
| 311 |
</xs:annotation> |
|
|
|
| 312 |
</xs:element> |
|
|
|
| 313 |
<xs:element ref="brca_shared:her2_neu_breast_carcinoma_copy_analysis_input_total_number"> |
|
|
|
| 314 |
<xs:annotation> |
|
|
|
| 315 |
<xs:documentation> |
|
|
|
| 316 |
Data for the brca_shared:her2_neu_breast_carcinoma_copy_analysis_input_total_number element |
|
|
|
| 317 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 319 |
DEPRECATED: |
+- |
|
|
| 320 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 321 |
within the BRCA study. |
|
|
|
| 322 |
</xs:documentation> |
|
|
|
| 323 |
</xs:annotation> |
|
|
|
| 324 |
</xs:element> |
|
|
|
| 325 |
<xs:element ref="brca_shared:fluorescence_in_situ_hybridization_diagnostic_procedure_chromosome_17_signal_result_range"> |
|
|
|
| 326 |
<xs:annotation> |
|
|
|
| 327 |
<xs:documentation> |
|
|
|
| 328 |
Data for the brca_shared:fluorescence_in_situ_hybridization_diagnostic_procedure_chromosome_17_signal_result_range |
|
|
|
| 329 |
element is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 331 |
DEPRECATED: |
+- |
|
|
| 332 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 333 |
within the BRCA study. |
|
|
|
| 334 |
</xs:documentation> |
|
|
|
| 335 |
</xs:annotation> |
|
|
|
| 336 |
</xs:element> |
|
|
|
| 337 |
<xs:element ref="brca_shared:her2_neu_and_centromere_17_copy_number_analysis_input_total_number_count"> |
|
|
|
| 338 |
<xs:annotation> |
|
|
|
| 339 |
<xs:documentation> |
|
|
|
| 340 |
Data for the brca_shared:her2_neu_and_centromere_17_copy_number_analysis_input_total_number_count |
|
|
|
| 341 |
element is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 343 |
DEPRECATED: |
+- |
|
|
| 344 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 345 |
within the BRCA study. |
|
|
|
| 346 |
</xs:documentation> |
|
|
|
| 347 |
</xs:annotation> |
|
|
|
| 348 |
</xs:element> |
|
|
|
| 349 |
<xs:element ref="brca_shared:her2_neu_chromosone_17_signal_ratio_value"> |
|
|
|
| 350 |
<xs:annotation> |
|
|
|
| 351 |
<xs:documentation> |
|
|
|
| 352 |
Data for the brca_shared:her2_neu_chromosone_17_signal_ratio_value element is also asked |
|
|
|
| 353 |
on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 355 |
DEPRECATED: |
+- |
|
|
| 356 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 357 |
within the BRCA study. |
|
|
|
| 358 |
</xs:documentation> |
|
|
|
| 359 |
</xs:annotation> |
|
|
|
| 360 |
</xs:element> |
|
|
|
| 361 |
<xs:element ref="brca_shared:her2_and_centromere_17_positive_finding_other_measurement_scale_text"> |
|
|
|
| 362 |
<xs:annotation> |
|
|
|
| 363 |
<xs:documentation> |
|
|
|
| 364 |
Data for the brca_shared:her2_and_centromere_17_positive_finding_other_measurement_scale_text element |
|
|
|
| 365 |
is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 367 |
DEPRECATED: |
+- |
|
|
| 368 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 369 |
within the BRCA study. |
|
|
|
| 370 |
</xs:documentation> |
|
|
|
| 371 |
</xs:annotation> |
|
|
|
| 372 |
</xs:element> |
|
|
|
| 373 |
<xs:element ref="brca_shared:her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text"> |
|
|
|
| 374 |
<xs:annotation> |
|
|
|
| 375 |
<xs:documentation> |
|
|
|
| 376 |
Data for the brca_shared:her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text |
|
|
|
| 377 |
element is also asked on the TCGA Clinical Data Form during initial enrollment within the BRCA study. |
|
|
|
| |
| 379 |
DEPRECATED: |
+- |
|
|
| 380 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 381 |
within the BRCA study. |
|
|
|
| 382 |
</xs:documentation> |
|
|
|
| 383 |
</xs:annotation> |
|
|
|
| 384 |
</xs:element> |
|
|
|
| 385 |
<xs:element ref="shared:additional_surgery_metastatic_procedure"> |
|
|
|
| 386 |
<xs:annotation> |
|
|
|
| 387 |
<xs:documentation> |
|
|
|
| 388 |
DEPRECATED: |
|
|
|
| 389 |
This question is no longer asked on the TCGA Clinical Data Follow-up Form (starting with v2.1) |
|
|
|
| 390 |
within the BRCA study. |
|
|
|
| 391 |
</xs:documentation> |
|
|
|
| 392 |
</xs:annotation> |
|
|
|
| 393 |
</xs:element> |
|
|
|
| 394 |
<xs:choice> |
|
|
|
| 395 |
<xs:sequence> |
|
|
|
| 396 |
<xs:element ref="shared:day_of_additional_surgery_metastatic_procedure" /> |
|
|
|
| 397 |
<xs:element ref="shared:month_of_additional_surgery_metastatic_procedure" /> |
|
|
|
| 398 |
<xs:element ref="shared:year_of_additional_surgery_metastatic_procedure" /> |
|
|
|
| 399 |
</xs:sequence> |
|
|
|
| 400 |
<xs:element ref="shared:days_to_additional_surgery_metastatic_procedure" /> |
|
|
|
| 401 |
</xs:choice> |
|
|
|
| |
| 403 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_estrogen_receptor_status" /> |
+- |
|
|
| 404 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_estrogen_receptor_level_cell_percent_category" /> |
|
|
|
| 405 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_immunohistochemistry_er_pos_cell_score" /> |
|
|
|
| 406 |
<xs:element ref="brca_shared:pos_finding_metastatic_breast_carcinoma_estrogen_receptor_other_measuremenet_scale_text" /> |
|
|
|
| 407 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_estrogen_receptor_detection_method_text" /> |
|
|
|
| 408 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_progesterone_receptor_status" /> |
|
|
|
| 409 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_progesterone_receptor_level_cell_percent_category" /> |
|
|
|
| 410 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_immunohistochemistry_pr_pos_cell_score" /> |
|
|
|
| 411 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_pos_finding_progesterone_receptor_other_measure_scale_text" /> |
|
|
|
| 412 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_progesterone_receptor_detection_method_text" /> |
|
|
|
| 413 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_lab_proc_her2_neu_immunohistochemistry_receptor_status" /> |
|
|
|
| 414 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_her2_erbb_pos_finding_cell_percent_category" /> |
|
|
|
| 415 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_erbb2_immunohistochemistry_level_result" /> |
|
|
|
| 416 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_pos_finding_her2_erbb2_other_measure_scale_text" /> |
|
|
|
| 417 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_her2_erbb_method_calculation_method_text" /> |
|
|
|
| 418 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_lab_proc_her2_neu_in_situ_hybridization_outcome_type" /> |
|
|
|
| 419 |
<xs:element ref="brca_shared:her2_neu_metastatic_breast_carcinoma_copy_analysis_input_total_number" /> |
|
|
|
| 420 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_fluorescence_in_situ_hybridization_diagnostic_proc_centromere_17_signal_result_range" /> |
|
|
|
| 421 |
<xs:element ref="brca_shared:her2_neu_and_centromere_17_copy_number_metastatic_breast_carcinoma_analysis_input_total_number_count" /> |
|
|
|
| 422 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_her2_neu_chromosone_17_signal_ratio_value" /> |
|
|
|
| 423 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_pos_finding_other_scale_measurement_text" /> |
|
|
|
| 424 |
<xs:element ref="brca_shared:metastatic_breast_carcinoma_her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text" /> |
|
|
|
| |
| 426 |
<xs:element ref="shared:additional_radiation_therapy" /> |
+- |
|
|
| 427 |
<xs:element ref="shared:additional_pharmaceutical_therapy" /> |
|
|
|
| |
| 429 |
<xs:choice> |
+- |
|
|
| 430 |
<xs:annotation> |
|
|
|
| 431 |
<xs:documentation> |
|
|
|
| 432 |
Date the interviewer originally completed the corresponding TCGA Clinical Data Form. |
|
|
|
| 433 |
If modifications are made after the form is marked complete, this date should not change. |
|
|
|
| 434 |
</xs:documentation> |
|
|
|
| 435 |
</xs:annotation> |
|
|
|
| 436 |
<xs:sequence> |
|
|
|
| 437 |
<xs:element ref="shared:day_of_form_completion" /> |
|
|
|
| 438 |
<xs:element ref="shared:month_of_form_completion" /> |
|
|
|
| 439 |
<xs:element ref="shared:year_of_form_completion" /> |
|
|
|
| 440 |
</xs:sequence> |
|
|
|
| 441 |
<xs:element ref="shared:days_to_form_completion" /> |
|
|
|
| 442 |
</xs:choice> |
|
|
|
| 443 |
</xs:sequence> |
|
|
|
| 444 |
<xs:attribute name="version" type="xs:string" default="1.5" use="optional"/> |
|
|
|
| 445 |
</xs:complexType> |
|
|
|
| 446 |
</xs:element> |
|
|
|
| 447 |
</xs:schema> |
|
|
|
| 1 |
<?xml version="1.0" encoding="utf-8" ?> |
+- |
|
|
| |
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
+- |
|
|
| 5 |
xmlns:xs="http://www.w3.org/2001/XMLSchema" |
|
|
|
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
|
|
|
| 7 |
xmlns="http://tcga.nci/bcr/xml/clinical/brca/shared/2.5" |
|
|
|
| 8 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/brca/shared/2.5"> |
|
|
|
| |
| 10 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
+- |
|
|
| |
| 12 |
<xs:element name="new_neoplasm_event_occurrence_anatomic_site" nillable="true"> |
+- |
|
|
| 13 |
<xs:annotation><xs:documentation> |
|
|
|
| 14 |
New question that was added TCGA clinical data follow-up (v2.1) form within the BRCA study. |
|
|
|
| 15 |
This XSD element definition will probably be moved to a more general XSD. |
|
|
|
| 16 |
</xs:documentation></xs:annotation> |
|
|
|
| 17 |
<xs:complexType mixed="true"> |
|
|
|
| 18 |
<xs:simpleContent> |
|
|
|
| 19 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 20 |
<xs:enumeration value="" /> |
|
|
|
| 21 |
<xs:enumeration value="Lung" /> |
|
|
|
| 22 |
<xs:enumeration value="Bone" /> |
|
|
|
| 23 |
<xs:enumeration value="Liver" /> |
|
|
|
| 24 |
<xs:enumeration value="Brain" /> |
|
|
|
| 25 |
<xs:enumeration value="Other, specify" /> |
|
|
|
| 26 |
<xs:attribute name="cde" type="xs:string" default="3108271" /> |
|
|
|
| 27 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5.0" /> |
|
|
|
| 28 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 29 |
</xs:restriction> |
|
|
|
| 30 |
</xs:simpleContent> |
|
|
|
| 31 |
</xs:complexType> |
|
|
|
| 32 |
</xs:element> |
|
|
|
| |
| 34 |
<xs:element name="new_neoplasm_occurrence_anatomic_site_text" nillable="true"> |
+- |
|
|
| 35 |
<xs:complexType> |
|
|
|
| 36 |
<xs:simpleContent> |
|
|
|
| 37 |
<xs:extension base="xs:string"> |
|
|
|
| 38 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 39 |
<xs:attribute name="cde" type="xs:string" default="3128033" /> |
|
|
|
| 40 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5.0" /> |
|
|
|
| 41 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 42 |
</xs:extension> |
|
|
|
| 43 |
</xs:simpleContent> |
|
|
|
| 44 |
</xs:complexType> |
|
|
|
| 45 |
</xs:element> |
|
|
|
| |
| 47 |
<xs:element name="er_detection_method_text" nillable="true"> |
+- |
|
|
| 48 |
<xs:complexType> |
|
|
|
| 49 |
<xs:simpleContent> |
|
|
|
| 50 |
<xs:extension base="xs:string"> |
|
|
|
| 51 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
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|
| 52 |
<xs:attribute name="cde" type="xs:string" default="69" /> |
|
|
|
| 53 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 54 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 55 |
</xs:extension> |
|
|
|
| 56 |
</xs:simpleContent> |
|
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|
| 57 |
</xs:complexType> |
|
|
|
| 58 |
</xs:element> |
|
|
|
| |
| 60 |
<xs:element name="pgr_detection_method_text" nillable="true"> |
+- |
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|
| 61 |
<xs:complexType> |
|
|
|
| 62 |
<xs:simpleContent> |
|
|
|
| 63 |
<xs:extension base="xs:string"> |
|
|
|
| 64 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 65 |
<xs:attribute name="cde" type="xs:string" default="785" /> |
|
|
|
| 66 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 67 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 68 |
</xs:extension> |
|
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|
| 69 |
</xs:simpleContent> |
|
|
|
| 70 |
</xs:complexType> |
|
|
|
| 71 |
</xs:element> |
|
|
|
| |
| 73 |
<xs:element name="her2_neu_chromosone_17_signal_ratio_value" nillable="true"> |
+- |
|
|
| 74 |
<xs:complexType> |
|
|
|
| 75 |
<xs:simpleContent> |
|
|
|
| 76 |
<xs:extension base="utility:number_or_null"> |
|
|
|
| 77 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 78 |
<xs:attribute name="cde" type="xs:string" default="2497552" /> |
|
|
|
| 79 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
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|
| 80 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
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|
| 81 |
</xs:extension> |
|
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|
| 82 |
</xs:simpleContent> |
|
|
|
| 83 |
</xs:complexType> |
|
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|
| 84 |
</xs:element> |
|
|
|
| |
| 86 |
<xs:element name="breast_carcinoma_progesterone_receptor_status" nillable="true"> |
+- |
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|
| 87 |
<xs:complexType> |
|
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|
| 88 |
<xs:simpleContent> |
|
|
|
| 89 |
<xs:extension base="posNegStat"> |
|
|
|
| 90 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
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|
| 91 |
<xs:attribute name="cde" type="xs:string" default="2957357" /> |
|
|
|
| 92 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 93 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
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|
| 94 |
</xs:extension> |
|
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|
| 95 |
</xs:simpleContent> |
|
|
|
| 96 |
</xs:complexType> |
|
|
|
| 97 |
</xs:element> |
|
|
|
| |
| 99 |
<xs:element name="immunohistochemistry_positive_cell_score" nillable="true"> |
+- |
|
|
| 100 |
<xs:complexType> |
|
|
|
| 101 |
<xs:simpleContent> |
|
|
|
| 102 |
<xs:extension base="onePlusToFourPlus"> |
|
|
|
| 103 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 104 |
<xs:attribute name="cde" type="xs:string" default="2230166" /> |
|
|
|
| 105 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 106 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 107 |
</xs:extension> |
|
|
|
| 108 |
</xs:simpleContent> |
|
|
|
| 109 |
</xs:complexType> |
|
|
|
| 110 |
</xs:element> |
|
|
|
| |
| 112 |
<xs:element name="her2_immunohistochemistry_level_result" nillable="true"> |
+- |
|
|
| 113 |
<xs:annotation><xs:documentation> |
|
|
|
| 114 |
DEPRECATED: The CDE has changed for this question. |
|
|
|
| 115 |
See metastatic_breast_carcinoma_immunohistochemistry_er_positive_finding_scale_type |
|
|
|
| 116 |
</xs:documentation></xs:annotation> |
|
|
|
| 117 |
<xs:complexType> |
|
|
|
| 118 |
<xs:simpleContent> |
|
|
|
| 119 |
<xs:extension base="onePlusToFourPlus"> |
|
|
|
| 120 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 121 |
<xs:attribute name="cde" type="xs:string" default="2178402" /> |
|
|
|
| 122 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 123 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 124 |
</xs:extension> |
|
|
|
| 125 |
</xs:simpleContent> |
|
|
|
| 126 |
</xs:complexType> |
|
|
|
| 127 |
</xs:element> |
|
|
|
| |
| 129 |
<xs:element name="lab_procedure_her2_neu_in_situ_hybrid_outcome_type" nillable="true"> |
+- |
|
|
| 130 |
<xs:complexType> |
|
|
|
| 131 |
<xs:simpleContent> |
|
|
|
| 132 |
<xs:extension base="posNegStat"> |
|
|
|
| 133 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 134 |
<xs:attribute name="cde" type="xs:string" default="2854089" /> |
|
|
|
| 135 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 136 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 137 |
</xs:extension> |
|
|
|
| 138 |
</xs:simpleContent> |
|
|
|
| 139 |
</xs:complexType> |
|
|
|
| 140 |
</xs:element> |
|
|
|
| |
| 142 |
<xs:element name="breast_carcinoma_estrogen_receptor_status" nillable="true"> |
+- |
|
|
| 143 |
<xs:complexType> |
|
|
|
| 144 |
<xs:simpleContent> |
|
|
|
| 145 |
<xs:extension base="posNegStat"> |
|
|
|
| 146 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 147 |
<xs:attribute name="cde" type="xs:string" default="2957359" /> |
|
|
|
| 148 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 149 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 150 |
</xs:extension> |
|
|
|
| 151 |
</xs:simpleContent> |
|
|
|
| 152 |
</xs:complexType> |
|
|
|
| 153 |
</xs:element> |
|
|
|
| |
| 155 |
<xs:element name="lab_proc_her2_neu_immunohistochemistry_receptor_status" nillable="true"> |
+- |
|
|
| 156 |
<xs:complexType> |
|
|
|
| 157 |
<xs:simpleContent> |
|
|
|
| 158 |
<xs:extension base="posNegStat"> |
|
|
|
| 159 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 160 |
<xs:attribute name="cde" type="xs:string" default="2957563" /> |
|
|
|
| 161 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 162 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 163 |
</xs:extension> |
|
|
|
| 164 |
</xs:simpleContent> |
|
|
|
| 165 |
</xs:complexType> |
|
|
|
| 166 |
</xs:element> |
|
|
|
| |
| 168 |
<xs:element name="pos_finding_progesterone_receptor_other_measurement_scale_text" nillable="true"> |
+- |
|
|
| 169 |
<xs:complexType> |
|
|
|
| 170 |
<xs:simpleContent> |
|
|
|
| 171 |
<xs:extension base="xs:string"> |
|
|
|
| 172 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 173 |
<xs:attribute name="cde" type="xs:string" default="3086857" /> |
|
|
|
| 174 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 175 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 176 |
</xs:extension> |
|
|
|
| 177 |
</xs:simpleContent> |
|
|
|
| 178 |
</xs:complexType> |
|
|
|
| 179 |
</xs:element> |
|
|
|
| |
| 181 |
<xs:element name="positive_finding_estrogen_receptor_other_measurement_scale_text" nillable="true"> |
+- |
|
|
| 182 |
<xs:complexType> |
|
|
|
| 183 |
<xs:simpleContent> |
|
|
|
| 184 |
<xs:extension base="xs:string"> |
|
|
|
| 185 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 186 |
<xs:attribute name="cde" type="xs:string" default="3086851" /> |
|
|
|
| 187 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 188 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 189 |
</xs:extension> |
|
|
|
| 190 |
</xs:simpleContent> |
|
|
|
| 191 |
</xs:complexType> |
|
|
|
| 192 |
</xs:element> |
|
|
|
| |
| 194 |
<xs:element name="her2_erbb_pos_finding_cell_percent_category" nillable="true"> |
+- |
|
|
| 195 |
<xs:complexType> |
|
|
|
| 196 |
<xs:simpleContent> |
|
|
|
| 197 |
<xs:extension base="percentByTens"> |
|
|
|
| 198 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 199 |
<xs:attribute name="cde" type="xs:string" default="3086980" /> |
|
|
|
| 200 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 201 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 202 |
</xs:extension> |
|
|
|
| 203 |
</xs:simpleContent> |
|
|
|
| 204 |
</xs:complexType> |
|
|
|
| 205 |
</xs:element> |
|
|
|
| |
| 207 |
<xs:element name="pos_finding_her2_erbb2_other_measurement_scale_text" nillable="true"> |
+- |
|
|
| 208 |
<xs:complexType> |
|
|
|
| 209 |
<xs:simpleContent> |
|
|
|
| 210 |
<xs:extension base="xs:string"> |
|
|
|
| 211 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 212 |
<xs:attribute name="cde" type="xs:string" default="3087479" /> |
|
|
|
| 213 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 214 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 215 |
</xs:extension> |
|
|
|
| 216 |
</xs:simpleContent> |
|
|
|
| 217 |
</xs:complexType> |
|
|
|
| 218 |
</xs:element> |
|
|
|
| |
| 220 |
<xs:element name="her2_erbb_method_calculation_method_text" nillable="true"> |
+- |
|
|
| 221 |
<xs:complexType> |
|
|
|
| 222 |
<xs:simpleContent> |
|
|
|
| 223 |
<xs:extension base="xs:string"> |
|
|
|
| 224 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 225 |
<xs:attribute name="cde" type="xs:string" default="3087487" /> |
|
|
|
| 226 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 227 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 228 |
</xs:extension> |
|
|
|
| 229 |
</xs:simpleContent> |
|
|
|
| 230 |
</xs:complexType> |
|
|
|
| 231 |
</xs:element> |
|
|
|
| |
| 233 |
<xs:element name="her2_neu_and_centromere_17_copy_number_analysis_input_total_number_count" nillable="true"> |
+- |
|
|
| 234 |
<xs:complexType> |
|
|
|
| 235 |
<xs:simpleContent> |
|
|
|
| 236 |
<xs:extension base="utility:integer_or_null"> |
|
|
|
| 237 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 238 |
<xs:attribute name="cde" type="xs:string" default="3087902" /> |
|
|
|
| 239 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 240 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 241 |
</xs:extension> |
|
|
|
| 242 |
</xs:simpleContent> |
|
|
|
| 243 |
</xs:complexType> |
|
|
|
| 244 |
</xs:element> |
|
|
|
| |
| 246 |
<xs:element name="her2_and_centromere_17_positive_finding_other_measurement_scale_text" nillable="true"> |
+- |
|
|
| 247 |
<xs:complexType> |
|
|
|
| 248 |
<xs:simpleContent> |
|
|
|
| 249 |
<xs:extension base="xs:string"> |
|
|
|
| 250 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 251 |
<xs:attribute name="cde" type="xs:string" default="3087923" /> |
|
|
|
| 252 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 253 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 254 |
</xs:extension> |
|
|
|
| 255 |
</xs:simpleContent> |
|
|
|
| 256 |
</xs:complexType> |
|
|
|
| 257 |
</xs:element> |
|
|
|
| |
| 259 |
<xs:element name="her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text" nillable="true"> |
+- |
|
|
| 260 |
<xs:complexType> |
|
|
|
| 261 |
<xs:simpleContent> |
|
|
|
| 262 |
<xs:extension base="xs:string"> |
|
|
|
| 263 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 264 |
<xs:attribute name="cde" type="xs:string" default="3087929" /> |
|
|
|
| 265 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 266 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 267 |
</xs:extension> |
|
|
|
| 268 |
</xs:simpleContent> |
|
|
|
| 269 |
</xs:complexType> |
|
|
|
| 270 |
</xs:element> |
|
|
|
| |
| 272 |
<xs:element name="fluorescence_in_situ_hybridization_diagnostic_procedure_chromosome_17_signal_result_range" nillable="true"> |
+- |
|
|
| 273 |
<xs:complexType> |
|
|
|
| 274 |
<xs:simpleContent> |
|
|
|
| 275 |
<xs:extension base="xs:string"> |
|
|
|
| 276 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 277 |
<xs:attribute name="cde" type="xs:string" default="3104295" /> |
|
|
|
| 278 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 279 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 280 |
</xs:extension> |
|
|
|
| 281 |
</xs:simpleContent> |
|
|
|
| 282 |
</xs:complexType> |
|
|
|
| 283 |
</xs:element> |
|
|
|
| |
| 285 |
<xs:element name="er_level_cell_percentage_category" nillable="true"> |
+- |
|
|
| 286 |
<xs:complexType> |
|
|
|
| 287 |
<xs:simpleContent> |
|
|
|
| 288 |
<xs:extension base="percentByTens"> |
|
|
|
| 289 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 290 |
<xs:attribute name="cde" type="xs:string" default="3128341" /> |
|
|
|
| 291 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 292 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 293 |
</xs:extension> |
|
|
|
| 294 |
</xs:simpleContent> |
|
|
|
| 295 |
</xs:complexType> |
|
|
|
| 296 |
</xs:element> |
|
|
|
| |
| 298 |
<xs:element name="progesterone_receptor_level_cell_percent_category" nillable="true"> |
+- |
|
|
| 299 |
<xs:complexType> |
|
|
|
| 300 |
<xs:simpleContent> |
|
|
|
| 301 |
<xs:extension base="percentByTens"> |
|
|
|
| 302 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 303 |
<xs:attribute name="cde" type="xs:string" default="3128342" /> |
|
|
|
| 304 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 305 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 306 |
</xs:extension> |
|
|
|
| 307 |
</xs:simpleContent> |
|
|
|
| 308 |
</xs:complexType> |
|
|
|
| 309 |
</xs:element> |
|
|
|
| |
| 311 |
<xs:element name="her2_neu_breast_carcinoma_copy_analysis_input_total_number" nillable="true"> |
+- |
|
|
| 312 |
<xs:complexType> |
|
|
|
| 313 |
<xs:simpleContent> |
|
|
|
| 314 |
<xs:extension base="xs:string"> |
|
|
|
| 315 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 316 |
<xs:attribute name="cde" type="xs:string" default="3133738" /> |
|
|
|
| 317 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 318 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 319 |
</xs:extension> |
|
|
|
| 320 |
</xs:simpleContent> |
|
|
|
| 321 |
</xs:complexType> |
|
|
|
| 322 |
</xs:element> |
|
|
|
| |
| 324 |
<xs:element name="breast_carcinoma_immunohistochemistry_pos_cell_score" nillable="true"> |
+- |
|
|
| 325 |
<xs:complexType> |
|
|
|
| 326 |
<xs:simpleContent> |
|
|
|
| 327 |
<xs:extension base="onePlusToFourPlus"> |
|
|
|
| 328 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 329 |
<xs:attribute name="cde" type="xs:string" default="3133874" /> |
|
|
|
| 330 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 331 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 332 |
</xs:extension> |
|
|
|
| 333 |
</xs:simpleContent> |
|
|
|
| 334 |
</xs:complexType> |
|
|
|
| 335 |
</xs:element> |
|
|
|
| |
| 337 |
<xs:element name="metastatic_breast_carcinoma_estrogen_receptor_status" nillable="true"> |
+- |
|
|
| 338 |
<xs:complexType> |
|
|
|
| 339 |
<xs:simpleContent> |
|
|
|
| 340 |
<xs:extension base="posNegStat"> |
|
|
|
| 341 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 342 |
<xs:attribute name="cde" type="xs:string" default="3131865" /> |
|
|
|
| 343 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 344 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 345 |
</xs:extension> |
|
|
|
| 346 |
</xs:simpleContent> |
|
|
|
| 347 |
</xs:complexType> |
|
|
|
| 348 |
</xs:element> |
|
|
|
| |
| 350 |
<xs:element name="metastatic_breast_carcinoma_estrogen_receptor_level_cell_percent_category" nillable="true"> |
+- |
|
|
| 351 |
<xs:complexType> |
|
|
|
| 352 |
<xs:simpleContent> |
|
|
|
| 353 |
<xs:extension base="percentByTens"> |
|
|
|
| 354 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 355 |
<xs:attribute name="cde" type="xs:string" default="3131869" /> |
|
|
|
| 356 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 357 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 358 |
</xs:extension> |
|
|
|
| 359 |
</xs:simpleContent> |
|
|
|
| 360 |
</xs:complexType> |
|
|
|
| 361 |
</xs:element> |
|
|
|
| |
| 363 |
<xs:element name="metastatic_breast_carcinoma_immunohistochemistry_er_positive_finding_scale_type" nillable="true"> |
+- |
|
|
| 364 |
<xs:annotation><xs:documentation> |
|
|
|
| 365 |
New question that was added TCGA clinical data follow-up (v2.1) form within the BRCA study |
|
|
|
| 366 |
</xs:documentation></xs:annotation> |
|
|
|
| 367 |
<xs:complexType mixed="true"> |
|
|
|
| 368 |
<xs:simpleContent> |
|
|
|
| 369 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 370 |
<xs:enumeration value="" /> |
|
|
|
| 371 |
<xs:enumeration value="3 Point Scale" /> |
|
|
|
| 372 |
<xs:enumeration value="4 Point Scale" /> |
|
|
|
| 373 |
<xs:enumeration value="Other Reporting Scale" /> |
|
|
|
| 374 |
<xs:attribute name="cde" type="xs:string" default="3203082" /> |
|
|
|
| 375 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5.0" /> |
|
|
|
| 376 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 377 |
</xs:restriction> |
|
|
|
| 378 |
</xs:simpleContent> |
|
|
|
| 379 |
</xs:complexType> |
|
|
|
| 380 |
</xs:element> |
|
|
|
| |
| 382 |
<xs:element name="metastatic_breast_carcinoma_immunohistochemistry_er_pos_cell_score" nillable="true"> |
+- |
|
|
| 383 |
<xs:complexType> |
|
|
|
| 384 |
<xs:simpleContent> |
|
|
|
| 385 |
<xs:extension base="onePlusToFourPlus"> |
|
|
|
| 386 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 387 |
<xs:attribute name="cde" type="xs:string" default="3131873" /> |
|
|
|
| 388 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 389 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 390 |
</xs:extension> |
|
|
|
| 391 |
</xs:simpleContent> |
|
|
|
| 392 |
</xs:complexType> |
|
|
|
| 393 |
</xs:element> |
|
|
|
| |
| 395 |
<xs:element name="pos_finding_metastatic_breast_carcinoma_estrogen_receptor_other_measuremenet_scale_text" nillable="true"> |
+- |
|
|
| 396 |
<xs:complexType> |
|
|
|
| 397 |
<xs:simpleContent> |
|
|
|
| 398 |
<xs:extension base="xs:string"> |
|
|
|
| 399 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 400 |
<xs:attribute name="cde" type="xs:string" default="3131877" /> |
|
|
|
| 401 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 402 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 403 |
</xs:extension> |
|
|
|
| 404 |
</xs:simpleContent> |
|
|
|
| 405 |
</xs:complexType> |
|
|
|
| 406 |
</xs:element> |
|
|
|
| |
| 408 |
<xs:element name="metastatic_breast_carcinoma_estrogen_receptor_detection_method_text" nillable="true"> |
+- |
|
|
| 409 |
<xs:complexType> |
|
|
|
| 410 |
<xs:simpleContent> |
|
|
|
| 411 |
<xs:extension base="xs:string"> |
|
|
|
| 412 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 413 |
<xs:attribute name="cde" type="xs:string" default="3131881" /> |
|
|
|
| 414 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 415 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 416 |
</xs:extension> |
|
|
|
| 417 |
</xs:simpleContent> |
|
|
|
| 418 |
</xs:complexType> |
|
|
|
| 419 |
</xs:element> |
|
|
|
| |
| 421 |
<xs:element name="metastatic_breast_carcinoma_progesterone_receptor_status" nillable="true"> |
+- |
|
|
| 422 |
<xs:complexType> |
|
|
|
| 423 |
<xs:simpleContent> |
|
|
|
| 424 |
<xs:extension base="posNegStat"> |
|
|
|
| 425 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 426 |
<xs:attribute name="cde" type="xs:string" default="3131884" /> |
|
|
|
| 427 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 428 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 429 |
</xs:extension> |
|
|
|
| 430 |
</xs:simpleContent> |
|
|
|
| 431 |
</xs:complexType> |
|
|
|
| 432 |
</xs:element> |
|
|
|
| |
| 434 |
<xs:element name="metastatic_breast_carcinoma_lab_proc_her2_neu_immunohistochemistry_receptor_status" nillable="true"> |
+- |
|
|
| 435 |
<xs:complexType> |
|
|
|
| 436 |
<xs:simpleContent> |
|
|
|
| 437 |
<xs:extension base="posNegStat"> |
|
|
|
| 438 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 439 |
<xs:attribute name="cde" type="xs:string" default="3131997" /> |
|
|
|
| 440 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 441 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 442 |
</xs:extension> |
|
|
|
| 443 |
</xs:simpleContent> |
|
|
|
| 444 |
</xs:complexType> |
|
|
|
| 445 |
</xs:element> |
|
|
|
| |
| 447 |
<xs:element name="metastatic_breast_carcinoma_progesterone_receptor_level_cell_percent_category" nillable="true"> |
+- |
|
|
| 448 |
<xs:complexType> |
|
|
|
| 449 |
<xs:simpleContent> |
|
|
|
| 450 |
<xs:extension base="percentByTens"> |
|
|
|
| 451 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 452 |
<xs:attribute name="cde" type="xs:string" default="3131891" /> |
|
|
|
| 453 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 454 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 455 |
</xs:extension> |
|
|
|
| 456 |
</xs:simpleContent> |
|
|
|
| 457 |
</xs:complexType> |
|
|
|
| 458 |
</xs:element> |
|
|
|
| |
| 460 |
<xs:element name="metastatic_breast_carcinoma_immunohistochemistry_progesterone_receptor_positive_finding_scale_type" nillable="true"> |
+- |
|
|
| 461 |
<xs:annotation><xs:documentation> |
|
|
|
| 462 |
New question that was added TCGA clinical data follow-up (v2.1) form within the BRCA study |
|
|
|
| 463 |
</xs:documentation></xs:annotation> |
|
|
|
| 464 |
<xs:complexType mixed="true"> |
|
|
|
| 465 |
<xs:simpleContent> |
|
|
|
| 466 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 467 |
<xs:enumeration value="" /> |
|
|
|
| 468 |
<xs:enumeration value="3 Point Scale" /> |
|
|
|
| 469 |
<xs:enumeration value="4 Point Scale" /> |
|
|
|
| 470 |
<xs:enumeration value="Other Reporting Scale" /> |
|
|
|
| 471 |
<xs:attribute name="cde" type="xs:string" default="3203085" /> |
|
|
|
| 472 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5.0" /> |
|
|
|
| 473 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 474 |
</xs:restriction> |
|
|
|
| 475 |
</xs:simpleContent> |
|
|
|
| 476 |
</xs:complexType> |
|
|
|
| 477 |
</xs:element> |
|
|
|
| |
| 479 |
<xs:element name="metastatic_breast_carcinoma_immunohistochemistry_pr_pos_cell_score" nillable="true"> |
+- |
|
|
| 480 |
<xs:complexType> |
|
|
|
| 481 |
<xs:simpleContent> |
|
|
|
| 482 |
<xs:extension base="onePlusToFourPlus"> |
|
|
|
| 483 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 484 |
<xs:attribute name="cde" type="xs:string" default="3131988" /> |
|
|
|
| 485 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 486 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 487 |
</xs:extension> |
|
|
|
| 488 |
</xs:simpleContent> |
|
|
|
| 489 |
</xs:complexType> |
|
|
|
| 490 |
</xs:element> |
|
|
|
| |
| 492 |
<xs:element name="metastatic_breast_carcinoma_pos_finding_progesterone_receptor_other_measure_scale_text" nillable="true"> |
+- |
|
|
| 493 |
<xs:complexType> |
|
|
|
| 494 |
<xs:simpleContent> |
|
|
|
| 495 |
<xs:extension base="xs:string"> |
|
|
|
| 496 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 497 |
<xs:attribute name="cde" type="xs:string" default="3131992" /> |
|
|
|
| 498 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 499 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 500 |
</xs:extension> |
|
|
|
| 501 |
</xs:simpleContent> |
|
|
|
| 502 |
</xs:complexType> |
|
|
|
| 503 |
</xs:element> |
|
|
|
| |
| 505 |
<xs:element name="metastatic_breast_carcinoma_progesterone_receptor_detection_method_text" nillable="true"> |
+- |
|
|
| 506 |
<xs:complexType> |
|
|
|
| 507 |
<xs:simpleContent> |
|
|
|
| 508 |
<xs:extension base="xs:string"> |
|
|
|
| 509 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 510 |
<xs:attribute name="cde" type="xs:string" default="3131993" /> |
|
|
|
| 511 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 512 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 513 |
</xs:extension> |
|
|
|
| 514 |
</xs:simpleContent> |
|
|
|
| 515 |
</xs:complexType> |
|
|
|
| 516 |
</xs:element> |
|
|
|
| |
| 518 |
<xs:element name="metastatic_breast_carcinoma_her2_erbb_pos_finding_cell_percent_category" nillable="true"> |
+- |
|
|
| 519 |
<xs:complexType> |
|
|
|
| 520 |
<xs:simpleContent> |
|
|
|
| 521 |
<xs:extension base="percentByTens"> |
|
|
|
| 522 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 523 |
<xs:attribute name="cde" type="xs:string" default="3132322" /> |
|
|
|
| 524 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 525 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 526 |
</xs:extension> |
|
|
|
| 527 |
</xs:simpleContent> |
|
|
|
| 528 |
</xs:complexType> |
|
|
|
| 529 |
</xs:element> |
|
|
|
| |
| 531 |
<xs:element name="metastatic_breast_carcinoma_erbb2_immunohistochemistry_level_result" nillable="true"> |
+- |
|
|
| 532 |
<xs:complexType> |
|
|
|
| 533 |
<xs:simpleContent> |
|
|
|
| 534 |
<xs:extension base="onePlusToFourPlus"> |
|
|
|
| 535 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 536 |
<xs:attribute name="cde" type="xs:string" default="3132444" /> |
|
|
|
| 537 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 538 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 539 |
</xs:extension> |
|
|
|
| 540 |
</xs:simpleContent> |
|
|
|
| 541 |
</xs:complexType> |
|
|
|
| 542 |
</xs:element> |
|
|
|
| |
| 544 |
<xs:element name="metastatic_breast_carcinoma_pos_finding_her2_erbb2_other_measure_scale_text" nillable="true"> |
+- |
|
|
| 545 |
<xs:complexType> |
|
|
|
| 546 |
<xs:simpleContent> |
|
|
|
| 547 |
<xs:extension base="xs:string"> |
|
|
|
| 548 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 549 |
<xs:attribute name="cde" type="xs:string" default="3132448" /> |
|
|
|
| 550 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 551 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 552 |
</xs:extension> |
|
|
|
| 553 |
</xs:simpleContent> |
|
|
|
| 554 |
</xs:complexType> |
|
|
|
| 555 |
</xs:element> |
|
|
|
| |
| 557 |
<xs:element name="metastatic_breast_carcinoma_her2_erbb_method_calculation_method_text" nillable="true"> |
+- |
|
|
| 558 |
<xs:complexType> |
|
|
|
| 559 |
<xs:simpleContent> |
|
|
|
| 560 |
<xs:extension base="xs:string"> |
|
|
|
| 561 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 562 |
<xs:attribute name="cde" type="xs:string" default="3132452" /> |
|
|
|
| 563 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 564 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 565 |
</xs:extension> |
|
|
|
| 566 |
</xs:simpleContent> |
|
|
|
| 567 |
</xs:complexType> |
|
|
|
| 568 |
</xs:element> |
|
|
|
| |
| 570 |
<xs:element name="metastatic_breast_carcinoma_lab_proc_her2_neu_in_situ_hybridization_outcome_type" nillable="true"> |
+- |
|
|
| 571 |
<xs:complexType> |
|
|
|
| 572 |
<xs:simpleContent> |
|
|
|
| 573 |
<xs:extension base="posNegStat"> |
|
|
|
| 574 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 575 |
<xs:attribute name="cde" type="xs:string" default="3132455" /> |
|
|
|
| 576 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 577 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 578 |
</xs:extension> |
|
|
|
| 579 |
</xs:simpleContent> |
|
|
|
| 580 |
</xs:complexType> |
|
|
|
| 581 |
</xs:element> |
|
|
|
| |
| 583 |
<xs:element name="metastatic_breast_carcinoma_fluorescence_in_situ_hybridization_diagnostic_proc_centromere_17_signal_result_range" nillable="true"> |
+- |
|
|
| 584 |
<xs:complexType> |
|
|
|
| 585 |
<xs:simpleContent> |
|
|
|
| 586 |
<xs:extension base="xs:string"> |
|
|
|
| 587 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 588 |
<xs:attribute name="cde" type="xs:string" default="3132887" /> |
|
|
|
| 589 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 590 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 591 |
</xs:extension> |
|
|
|
| 592 |
</xs:simpleContent> |
|
|
|
| 593 |
</xs:complexType> |
|
|
|
| 594 |
</xs:element> |
|
|
|
| |
| 596 |
<xs:element name="her2_neu_and_centromere_17_copy_number_metastatic_breast_carcinoma_analysis_input_total_number_count" nillable="true"> |
+- |
|
|
| 597 |
<xs:complexType> |
|
|
|
| 598 |
<xs:simpleContent> |
|
|
|
| 599 |
<xs:extension base="utility:integer_or_null"> |
|
|
|
| 600 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 601 |
<xs:attribute name="cde" type="xs:string" default="3132899" /> |
|
|
|
| 602 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 603 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 604 |
</xs:extension> |
|
|
|
| 605 |
</xs:simpleContent> |
|
|
|
| 606 |
</xs:complexType> |
|
|
|
| 607 |
</xs:element> |
|
|
|
| |
| 609 |
<xs:element name="metastatic_breast_carcinoma_her2_neu_chromosone_17_signal_ratio_value" nillable="true"> |
+- |
|
|
| 610 |
<xs:complexType> |
|
|
|
| 611 |
<xs:simpleContent> |
|
|
|
| 612 |
<xs:extension base="utility:number_or_null"> |
|
|
|
| 613 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 614 |
<xs:attribute name="cde" type="xs:string" default="3132903" /> |
|
|
|
| 615 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 616 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 617 |
</xs:extension> |
|
|
|
| 618 |
</xs:simpleContent> |
|
|
|
| 619 |
</xs:complexType> |
|
|
|
| 620 |
</xs:element> |
|
|
|
| |
| 622 |
<xs:element name="metastatic_breast_carcinoma_pos_finding_other_scale_measurement_text" nillable="true"> |
+- |
|
|
| 623 |
<xs:complexType> |
|
|
|
| 624 |
<xs:simpleContent> |
|
|
|
| 625 |
<xs:extension base="xs:string"> |
|
|
|
| 626 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 627 |
<xs:attribute name="cde" type="xs:string" default="3132907" /> |
|
|
|
| 628 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 629 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 630 |
</xs:extension> |
|
|
|
| 631 |
</xs:simpleContent> |
|
|
|
| 632 |
</xs:complexType> |
|
|
|
| 633 |
</xs:element> |
|
|
|
| |
| 635 |
<xs:element name="metastatic_breast_carcinoma_her2_erbb_pos_finding_fluorescence_in_situ_hybridization_calculation_method_text" nillable="true"> |
+- |
|
|
| 636 |
<xs:complexType> |
|
|
|
| 637 |
<xs:simpleContent> |
|
|
|
| 638 |
<xs:extension base="xs:string"> |
|
|
|
| 639 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 640 |
<xs:attribute name="cde" type="xs:string" default="3132910" /> |
|
|
|
| 641 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 642 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 643 |
</xs:extension> |
|
|
|
| 644 |
</xs:simpleContent> |
|
|
|
| 645 |
</xs:complexType> |
|
|
|
| 646 |
</xs:element> |
|
|
|
| |
| 648 |
<xs:element name="her2_neu_metastatic_breast_carcinoma_copy_analysis_input_total_number" nillable="true"> |
+- |
|
|
| 649 |
<xs:complexType> |
|
|
|
| 650 |
<xs:simpleContent> |
|
|
|
| 651 |
<xs:extension base="xs:string"> |
|
|
|
| 652 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 653 |
<xs:attribute name="cde" type="xs:string" default="3133734" /> |
|
|
|
| 654 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 655 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 656 |
</xs:extension> |
|
|
|
| 657 |
</xs:simpleContent> |
|
|
|
| 658 |
</xs:complexType> |
|
|
|
| 659 |
</xs:element> |
|
|
|
| |
| 661 |
<xs:simpleType name="percentByTens"> |
+- |
|
|
| 662 |
<xs:restriction base="xs:string"> |
|
|
|
| 663 |
<xs:enumeration value="<10%" /> |
|
|
|
| 664 |
<xs:enumeration value="10-19%" /> |
|
|
|
| 665 |
<xs:enumeration value="20-29%" /> |
|
|
|
| 666 |
<xs:enumeration value="30-39%" /> |
|
|
|
| 667 |
<xs:enumeration value="40-49%" /> |
|
|
|
| 668 |
<xs:enumeration value="50-59%" /> |
|
|
|
| 669 |
<xs:enumeration value="60-69%" /> |
|
|
|
| 670 |
<xs:enumeration value="70-79%" /> |
|
|
|
| 671 |
<xs:enumeration value="80-89%" /> |
|
|
|
| 672 |
<xs:enumeration value="90-99%" /> |
|
|
|
| 673 |
<xs:enumeration value="" /> |
|
|
|
| 674 |
</xs:restriction> |
|
|
|
| 675 |
</xs:simpleType> |
|
|
|
| |
| 677 |
<xs:simpleType name="posNegStat"> |
+- |
|
|
| 678 |
<xs:restriction base="xs:string"> |
|
|
|
| 679 |
<xs:enumeration value="" /> |
|
|
|
| 680 |
<xs:enumeration value="Positive" /> |
|
|
|
| 681 |
<xs:enumeration value="Negative" /> |
|
|
|
| 682 |
<xs:enumeration value="Unknown" /> |
|
|
|
| 683 |
<xs:enumeration value="Equivocal" /> |
|
|
|
| 684 |
<xs:enumeration value="Indeterminate" /> |
|
|
|
| 685 |
<xs:enumeration value="Performed but Not Available" /> |
|
|
|
| 686 |
<xs:enumeration value="Not Performed" /> |
|
|
|
| 687 |
</xs:restriction> |
|
|
|
| 688 |
</xs:simpleType> |
|
|
|
| |
| 690 |
<xs:simpleType name="posNegClose"> |
+- |
|
|
| 691 |
<xs:restriction base="xs:string"> |
|
|
|
| 692 |
<xs:enumeration value="" /> |
|
|
|
| 693 |
<xs:enumeration value="Positive" /> |
|
|
|
| 694 |
<xs:enumeration value="Negative" /> |
|
|
|
| 695 |
<xs:enumeration value="Close" /> |
|
|
|
| 696 |
</xs:restriction> |
|
|
|
| 697 |
</xs:simpleType> |
|
|
|
| |
| 699 |
<xs:simpleType name="onePlusToFourPlus"> |
+- |
|
|
| 700 |
<xs:restriction base="xs:string"> |
|
|
|
| 701 |
<xs:enumeration value="" /> |
|
|
|
| 702 |
<xs:enumeration value="0" /> |
|
|
|
| 703 |
<xs:enumeration value="1+" /> |
|
|
|
| 704 |
<xs:enumeration value="2+" /> |
|
|
|
| 705 |
<xs:enumeration value="3+" /> |
|
|
|
| 706 |
<xs:enumeration value="4+" /> |
|
|
|
| 707 |
</xs:restriction> |
|
|
|
| 708 |
</xs:simpleType> |
|
|
|
| |
| 710 |
</xs:schema> |
+- |
|
|
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 11 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 12 |
xmlns:cesc_shared="http://tcga.nci/bcr/xml/clinical/cesc/shared/2.5" |
|
|
|
| 13 |
xmlns:follow_up_v2.0="http://tcga.nci/bcr/xml/clinical/cesc/followup/2.5/2.0" |
|
|
|
| 14 |
xmlns="http://tcga.nci/bcr/xml/clinical/cesc/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/cesc/2.4" |
| 15 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/cesc/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/cesc/2.4" |
| |
| 31 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cesc/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cesc/shared/2.5/TCGA_BCR.CESC_Clinical_Shared_Datatypes.xsd" /> |
|
|
|
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cesc/followup/2.5/2.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cesc/followup/2.5/TCGA_BCR.CESC_Clinical_FollowUp_v2.0.xsd" /> |
|
|
|
| |
| 56 |
<xs:element ref="shared:tissue_source_site" /> |
<> |
48 |
<xs:element ref="shared:tumor_tissue_site" /> |
| 57 |
<xs:element ref="shared:patient_id" /> |
|
49 |
<xs:element ref="shared:prior_diagnosis" /> |
| 58 |
<xs:element ref="shared:bcr_patient_barcode" /> |
|
50 |
<xs:element ref="shared:gender" /> |
| 59 |
<xs:element ref="shared:bcr_patient_uuid" /> |
|
51 |
<xs:element ref="shared:vital_status" /> |
| 60 |
<xs:element ref="shared:informed_consent_verified" /> |
|
52 |
|
| 61 |
<xs:element ref="shared:icd_o_3_site" /> |
|
|
|
| 62 |
<xs:element ref="shared:icd_o_3_histology" /> |
|
|
|
| 63 |
<xs:element ref="shared:icd_10" /> |
|
|
|
| |
| 65 |
<xs:element ref="tissue_prospective_collection_indicator" /> |
+- |
|
|
| 66 |
<xs:element ref="tissue_retrospective_collection_indicator" /> |
|
|
|
| |
| |
|
<> |
63 |
<xs:choice> |
| |
|
|
64 |
<xs:sequence> |
| 75 |
<xs:element ref="shared:gender" /> |
|
65 |
<xs:element ref="shared:day_of_last_known_alive" /> |
| 76 |
<xs:element ref="menopause_status" /> |
|
66 |
<xs:element ref="shared:month_of_last_known_alive" /> |
| 77 |
<xs:element ref="shared:height" /> |
|
67 |
<xs:element ref="shared:year_of_last_known_alive" /> |
| |
|
|
68 |
</xs:sequence> |
| |
| 78 |
<xs:element ref="shared:weight" /> |
<> |
70 |
<xs:element ref="shared:days_to_last_known_alive" /> |
| |
|
|
71 |
</xs:choice> |
| |
| |
|
<> |
73 |
<xs:choice> |
| |
|
|
74 |
<xs:sequence> |
| 79 |
<xs:element ref="shared:race" /> |
|
75 |
<xs:element ref="shared:day_of_death" /> |
| 80 |
<xs:element ref="shared:ethnicity" /> |
|
76 |
<xs:element ref="shared:month_of_death" /> |
| 81 |
<xs:element ref="shared:prior_diagnosis" /> |
|
|
|
| 82 |
<xs:element ref="shared:pretreatment_history" /> |
|
77 |
<xs:element ref="shared:year_of_death" /> |
| |
|
|
78 |
</xs:sequence> |
| |
| 83 |
<xs:element ref="shared:vital_status" /> |
<> |
80 |
<xs:element ref="shared:days_to_death" /> |
| |
|
|
81 |
</xs:choice> |
| |
| |
|
-+ |
93 |
<xs:element ref="shared:race" /> |
| |
|
|
94 |
<xs:element ref="shared:bcr_patient_barcode" /> |
| |
|
|
95 |
<xs:element ref="shared:tissue_source_site" /> |
| |
|
|
96 |
<xs:element ref="shared:patient_id" /> |
| |
|
|
97 |
<xs:element ref="shared:bcr_patient_uuid" /> |
| |
|
|
98 |
<xs:element ref="shared:pretreatment_history" /> |
| |
|
|
99 |
<xs:element ref="shared:radiation_therapy" /> |
| |
|
|
100 |
<xs:element ref="shared:informed_consent_verified" /> |
| |
|
|
101 |
<xs:element ref="shared:icd_o_3_site" /> |
| |
|
|
102 |
<xs:element ref="shared:icd_o_3_histology" /> |
| |
|
|
103 |
<xs:element ref="shared:icd_10" /> |
| |
| 94 |
<xs:element ref="shared:day_of_death" /> |
<> |
107 |
<xs:element ref="shared:day_of_initial_pathologic_diagnosis" /> |
| 95 |
<xs:element ref="shared:month_of_death" /> |
|
108 |
<xs:element ref="shared:month_of_initial_pathologic_diagnosis" /> |
| |
|
|
109 |
</xs:sequence> |
| |
| |
|
-+ |
111 |
<xs:sequence> |
| |
|
|
112 |
<xs:element ref="shared:days_to_initial_pathologic_diagnosis" /> |
| |
|
|
113 |
<xs:element ref="shared:age_at_initial_pathologic_diagnosis" /> |
| |
|
|
114 |
</xs:sequence> |
| |
|
|
115 |
</xs:choice> |
| |
| 96 |
<xs:element ref="shared:year_of_death" /> |
<> |
117 |
<xs:element ref="shared:year_of_initial_pathologic_diagnosis" /> |
| |
| |
|
-+ |
119 |
<xs:choice> |
| |
|
|
120 |
<xs:sequence> |
| |
|
|
121 |
<xs:element ref="shared:day_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
122 |
<xs:element ref="shared:month_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
123 |
<xs:element ref="shared:year_of_new_tumor_event_after_initial_treatment" /> |
| |
| |
|
-+ |
126 |
<xs:element ref="shared:days_to_new_tumor_event_after_initial_treatment" /> |
| |
|
|
127 |
</xs:choice> |
| |
| 98 |
<xs:element ref="shared:days_to_death" /> |
<> |
129 |
<xs:element ref="shared:ethnicity" /> |
| |
|
|
130 |
<xs:element ref="shared:additional_radiation_therapy" /> |
| |
|
|
131 |
<xs:element ref="shared:additional_pharmaceutical_therapy" /> |
| |
| |
|
-+ |
133 |
<xs:choice> |
| |
|
|
134 |
<xs:sequence> |
| |
|
|
135 |
<xs:element ref="shared:day_of_additional_surgery_locoregional_procedure" /> |
| |
|
|
136 |
<xs:element ref="shared:month_of_additional_surgery_locoregional_procedure" /> |
| |
|
|
137 |
<xs:element ref="shared:year_of_additional_surgery_locoregional_procedure" /> |
| |
|
|
138 |
</xs:sequence> |
| |
| |
|
-+ |
140 |
<xs:element ref="shared:days_to_additional_surgery_locoregional_procedure" /> |
| |
| |
|
-+ |
143 |
<xs:element ref="shared:additional_surgery_metastatic_procedure" /> |
| |
| |
|
-+ |
145 |
<xs:element ref="tissue_prospective_collection_indicator" /> |
| |
|
|
146 |
<xs:element ref="tissue_retrospective_collection_indicator" /> |
| |
|
|
147 |
<xs:element ref="diagnosis_age" /> |
| |
|
|
148 |
<xs:element ref="person_menopause_status" /> |
| |
| 109 |
<xs:element ref="tobacco_smoking_history_indicator" /> |
<> |
157 |
<xs:element ref="patient_smoking_history_category" /> |
| |
| 111 |
<xs:element ref="shared:stopped_smoking_year" /> |
<> |
159 |
<xs:element ref="stopped_smoking_year" /> |
| 112 |
<xs:element ref="shared:number_pack_years_smoked" /> |
|
160 |
<xs:element ref="person_cigarette_smoking_history_pack_year_value" /> |
| 113 |
<xs:element ref="patient_history_immune_system_and_related_disorders_names" /> |
|
161 |
<xs:element ref="patient_history_immune_system_and_related_disorders_name" /> |
| |
| 115 |
<xs:element ref="shared:eastern_cancer_oncology_group" /> |
<> |
163 |
<xs:element ref="performance_status_assessment_eastern_cooperative_oncology_group_scale" /> |
| 116 |
<xs:element ref="shared:performance_status_scale_timing" /> |
|
164 |
<xs:element ref="performance_status_assessment_timepoint_category" /> |
| 117 |
<xs:element ref="cesc_shared:performance_status_assessment_timepoint_category_other_text" /> |
|
165 |
<xs:element ref="performance_status_assessment_timepoint_category_other_text" /> |
| |
| 128 |
<xs:element ref="shared:tumor_tissue_site" /> |
<> |
|
|
| 129 |
<xs:element ref="histological_type" /> |
|
178 |
<xs:element ref="neoplasm_histologic_type_name" /> |
| |
| 131 |
<xs:element ref="shared:neoplasm_histologic_grade" /> |
<> |
180 |
<xs:element ref="neoplasm_histologic_grade" /> |
| |
| 133 |
<xs:choice> |
<> |
|
|
| 134 |
<xs:sequence> |
|
|
|
| 135 |
<xs:element ref="shared:day_of_initial_pathologic_diagnosis" /> |
|
|
|
| 136 |
<xs:element ref="shared:month_of_initial_pathologic_diagnosis" /> |
|
181 |
<xs:element ref="first_pathologic_diagnosis_biospecimen_acquisition_method_type" /> |
| 137 |
</xs:sequence> |
|
|
|
| 138 |
<xs:sequence> |
|
|
|
| 139 |
<xs:element ref="shared:days_to_initial_pathologic_diagnosis" /> |
|
|
|
| 140 |
<xs:element ref="shared:age_at_initial_pathologic_diagnosis" /> |
|
|
|
| 141 |
</xs:sequence> |
|
|
|
| 142 |
</xs:choice> |
|
|
|
| 143 |
<xs:element ref="shared:year_of_initial_pathologic_diagnosis" /> |
|
|
|
| |
| 145 |
<xs:element ref="shared:initial_pathologic_diagnosis_method" /> |
+- |
|
|
| |
| 147 |
<xs:element ref="lymph_node_location_positive_pathology_names" /> |
<> |
183 |
<xs:element ref="lymph_node_location_positive_pathology_name" /> |
| |
| 155 |
<xs:element ref="shared:primary_lymph_node_presentation_assessment" /> |
<> |
|
|
| 156 |
<xs:element ref="shared:lymph_node_examined_count" /> |
|
190 |
<xs:element ref="lymph_node_examined_count" /> |
| 157 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_he" /> |
|
191 |
<xs:element ref="positive_finding_lymph_node_hematoxylin_and_eosin_staining_microscopy_count" /> |
| 158 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_ihc" /> |
|
192 |
<xs:element ref="positive_finding_lymph_node_keratin_immunohistochemistry_staining_method_count" /> |
| |
| 162 |
<xs:element ref="shared:ajcc_tumor_stage_code" /> |
<> |
196 |
<xs:element ref="cervical_tumor_pathologic_t_v7_stage" /> |
| 163 |
<xs:element ref="shared:ajcc_neoplasm_disease_lymph_node_stage" /> |
|
197 |
<xs:element ref="cervical_tumor_pathologic_n_v7_stage" /> |
| 164 |
<xs:element ref="shared:ajcc_cancer_metastasis_stage_code" /> |
|
198 |
<xs:element ref="cervical_tumor_pathologic_m_stage_cervical_cancer_pathologic_distant_metastasis_tnm_finding_v7_stage" /> |
| 165 |
<xs:element ref="shared:gynecologic_figo_staging_system"/> |
|
199 |
<xs:element ref="cervical_carcinoma_clinical_stage" /> |
| 166 |
<xs:element ref="gynecologic_tumor_grouping_figo_stage" /> |
|
200 |
|
| |
| 195 |
<xs:element ref="human_papillomavirus_types" /> |
<> |
235 |
<xs:element ref="human_papillomavirus_type" /> |
| |
| |
|
-+ |
252 |
<xs:element ref="patient_death_reason" /> |
| |
|
|
253 |
<xs:element ref="death_cause_text" /> |
| |
| |
|
-+ |
257 |
<xs:element ref="day_of_performance_status_follow_up_score" /> |
| |
|
|
258 |
<xs:element ref="month_of_performance_status_follow_up_score_event" /> |
| |
|
|
259 |
<xs:element ref="year_of_performance_status_follow_up_score" /> |
| |
|
|
260 |
</xs:sequence> |
| |
|
|
261 |
<xs:element ref="days_to_performance_status_follow_up_score" /> |
| |
|
|
262 |
</xs:choice> |
| |
| |
|
-+ |
265 |
<xs:element ref="primary_therapy_outcome_success_type" /> |
| |
|
|
266 |
<xs:element ref="new_neoplasm_event_type" /> |
| |
|
|
267 |
<xs:element ref="new_neoplasm_event_occurrence_anatomic_site" /> |
| |
|
|
268 |
<xs:element ref="new_neoplasm_occurrence_anatomic_site_text" /> |
| |
|
|
269 |
<xs:element ref="new_neoplasm_event_post_initial_therapy_diagnosis_method_type" /> |
| |
|
|
270 |
<xs:element ref="new_neoplasm_event_post_initial_therapy_diagnosis_method_text" /> |
| |
|
|
271 |
<xs:element ref="residual_disease_post_new_tumor_event_margin_status" /> |
| |
|
|
272 |
<xs:element ref="radiation_therapy_not_administered_reason" /> |
| |
|
|
273 |
<xs:element ref="radiation_therapy_not_administered_specify" /> |
| |
|
|
274 |
<xs:element ref="brachytherapy_method_type" /> |
| |
|
|
275 |
<xs:element ref="brachytherapy_method_other_specify_text" /> |
| |
| |
|
-+ |
277 |
<xs:choice> |
| |
|
|
278 |
<xs:sequence> |
| |
|
|
279 |
<xs:element ref="day_of_brachytherapy_begin_occurrence" /> |
| |
|
|
280 |
<xs:element ref="month_of_brachytherapy_begin_occurrence" /> |
| |
|
|
281 |
<xs:element ref="year_of_brachytherapy_begin_occurrence" /> |
| |
|
|
282 |
</xs:sequence> |
| |
|
|
283 |
<xs:element ref="days_to_brachytherapy_begin_occurrence" /> |
| |
|
|
284 |
</xs:choice> |
| |
| |
|
-+ |
286 |
<xs:choice> |
| |
|
|
287 |
<xs:sequence> |
| |
|
|
288 |
<xs:element ref="day_of_brachytherapy_end_occurrence" /> |
| |
|
|
289 |
<xs:element ref="month_of_brachytherapy_end_occurrence" /> |
| |
|
|
290 |
<xs:element ref="year_of_brachytherapy_end_occurrence" /> |
| |
|
|
291 |
</xs:sequence> |
| |
|
|
292 |
<xs:element ref="days_to_brachytherapy_end_occurrence" /> |
| |
|
|
293 |
</xs:choice> |
| |
| |
|
-+ |
295 |
<xs:element ref="brachytherapy_first_reference_point_administered_total_dose" /> |
| |
|
|
296 |
<xs:element ref="brachytherapy_administered_status" /> |
| |
|
|
297 |
<xs:element ref="radiation_supplemental" /> |
| |
|
|
298 |
<xs:element ref="chemotherapy_regimen_type" /> |
| |
|
|
299 |
<xs:element ref="other_chemotherapy_agent_administration_specify" /> |
| |
| |
|
-+ |
301 |
<xs:choice> |
| |
|
|
302 |
<xs:sequence> |
| |
|
|
303 |
<xs:element ref="day_of_chemotherapy_start" /> |
| |
|
|
304 |
<xs:element ref="month_of_chemotherapy_start" /> |
| |
|
|
305 |
<xs:element ref="year_of_chemotherapy_start" /> |
| |
|
|
306 |
</xs:sequence> |
| |
|
|
307 |
<xs:element ref="days_to_chemotherapy_start" /> |
| |
|
|
308 |
</xs:choice> |
| |
| |
|
-+ |
310 |
<xs:choice> |
| |
|
|
311 |
<xs:sequence> |
| |
|
|
312 |
<xs:element ref="day_of_chemotherapy_end" /> |
| |
|
|
313 |
<xs:element ref="month_of_chemotherapy_end" /> |
| |
|
|
314 |
<xs:element ref="year_of_chemotherapy_end" /> |
| |
|
|
315 |
</xs:sequence> |
| |
|
|
316 |
<xs:element ref="days_to_chemotherapy_end" /> |
| |
|
|
317 |
</xs:choice> |
| |
| |
|
-+ |
319 |
<xs:element ref="dose_frequency_text" /> |
| |
|
|
320 |
<xs:element ref="agent_total_dose_count" /> |
| |
|
|
321 |
<xs:element ref="additional_treatment_completion_success_outcome_type" /> |
| |
|
|
322 |
<xs:choice> |
| |
|
|
323 |
<xs:sequence> |
| |
| 219 |
<xs:element ref="follow_ups" /> |
+- |
|
|
| |
| 222 |
<xs:element ref="clinical_cqcf" /> |
+- |
|
|
| |
| 227 |
<xs:element name="follow_ups"> |
+- |
|
|
| 228 |
<xs:annotation> |
|
|
|
| 229 |
<xs:documentation xml:lang="en">We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
|
|
| 230 |
</xs:annotation> |
|
|
|
| 231 |
<xs:complexType> |
|
|
|
| 232 |
<xs:sequence> |
|
|
|
| 233 |
<xs:element ref="follow_up_v2.0:follow_up_v2.0" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| 234 |
</xs:sequence> |
|
|
|
| 235 |
</xs:complexType> |
|
|
|
| 236 |
</xs:element> |
|
|
|
| |
| 238 |
<xs:element name="clinical_cqcf"> |
<> |
338 |
<xs:element name="radiation_supplemental"> |
| |
| 241 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
+- |
|
|
| 242 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
|
|
| |
| 245 |
<xs:choice> |
+- |
|
|
| |
| 247 |
<xs:element ref="cqcf:day_of_consent"/> |
<> |
343 |
<xs:element ref="rad:day_of_radiation_therapy_start" /> |
| 248 |
<xs:element ref="cqcf:month_of_consent"/> |
|
344 |
<xs:element ref="rad:month_of_radiation_therapy_start" /> |
| 249 |
<xs:element ref="cqcf:year_of_consent"/> |
|
345 |
<xs:element ref="rad:year_of_radiation_therapy_start" /> |
| |
| 252 |
<xs:element ref="cqcf:days_to_consent"/> |
<> |
348 |
<xs:element ref="rad:days_to_radiation_therapy_start" /> |
| |
| 257 |
<xs:element ref="shared:day_of_death"/> |
<> |
353 |
<xs:element ref="rad:day_of_radiation_therapy_end" /> |
| 258 |
<xs:element ref="shared:month_of_death"/> |
|
354 |
<xs:element ref="rad:month_of_radiation_therapy_end" /> |
| 259 |
<xs:element ref="shared:year_of_death"/> |
|
355 |
<xs:element ref="rad:year_of_radiation_therapy_end" /> |
| |
| 262 |
<xs:element ref="shared:days_to_death"/> |
<> |
358 |
<xs:element ref="rad:days_to_radiation_therapy_end" /> |
| 263 |
</xs:choice> |
|
|
|
| |
| 266 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
<> |
361 |
<xs:element ref="rt_administered_type" /> |
| 267 |
<xs:element ref="shared:prior_diagnosis"/> |
|
362 |
<xs:element ref="rad:radiation_type_notes" /> |
| 268 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
363 |
<xs:element ref="rt_pelvis_administered_total_dose" /> |
| |
|
|
364 |
<xs:element ref="external_beam_radiation_therapy_administered_paraaortic_region_lymph_node_dose" /> |
| 269 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
|
365 |
<xs:element ref="external_beam_radiation_therapy_administered_status" /> |
| 270 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
366 |
<xs:element ref="adjuvant_postoperative_targeted_therapy_administered_indicator" /> |
| 271 |
<xs:element ref="cqcf:tumor_focality"/> |
|
367 |
<xs:element ref="chemotherapy_negation_radiation_therapy_concurrent_not_administered_reason" /> |
| 272 |
<xs:element ref="cqcf:tumor_type"/> |
|
|
|
| 273 |
<xs:element ref="cqcf:other_diagnosis"/> |
|
|
|
| 274 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
|
|
| 275 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
|
368 |
<xs:element ref="chemotherapy_negation_radiation_therapy_concurrent_administered_text" /> |
| 276 |
<xs:element ref="cqcf:country"/> |
|
|
|
| |
| 310 |
<xs:extension base="utility:number_or_null"> |
<> |
402 |
<xs:extension base="xs:decimal"> |
| |
| 320 |
<xs:element name="menopause_status" nillable="true"> |
<> |
412 |
<xs:element name="person_menopause_status" nillable="true"> |
| |
| 369 |
<xs:extension base="utility:number_or_null"> |
<> |
461 |
<xs:extension base="xs:decimal"> |
| |
| 382 |
<xs:extension base="utility:number_or_null"> |
<> |
474 |
<xs:extension base="xs:decimal"> |
| |
| 395 |
<xs:extension base="utility:number_or_null"> |
<> |
487 |
<xs:extension base="xs:decimal"> |
| |
| 408 |
<xs:extension base="utility:number_or_null"> |
<> |
500 |
<xs:extension base="xs:decimal"> |
| |
| 444 |
<xs:element name="tobacco_smoking_history_indicator" nillable="true"> |
<> |
536 |
<xs:element name="patient_smoking_history_category" nillable="true"> |
| |
| 464 |
<xs:extension base="utility:number_or_null"> |
<> |
556 |
<xs:extension base="xs:decimal"> |
| |
| 474 |
<xs:element name="patient_history_immune_system_and_related_disorders_names"> |
<> |
566 |
<xs:element name="stopped_smoking_year" nillable="true"> |
| |
| |
|
<> |
568 |
<xs:simpleContent> |
| |
|
|
569 |
<xs:extension base="xs:decimal"> |
| |
|
|
570 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
571 |
<xs:attribute name="cde" type="xs:string" default="2228610" /> |
| |
|
|
572 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
573 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
574 |
</xs:extension> |
| |
|
|
575 |
</xs:simpleContent> |
| |
|
|
576 |
</xs:complexType> |
| 476 |
<xs:sequence > |
|
577 |
</xs:element> |
| |
| 477 |
<xs:element ref="patient_history_immune_system_and_related_disorders_name" minOccurs="0" maxOccurs="unbounded" /> |
<> |
579 |
<xs:element name="person_cigarette_smoking_history_pack_year_value" nillable="true"> |
| |
|
|
580 |
<xs:complexType> |
| |
|
|
581 |
<xs:simpleContent> |
| |
|
|
582 |
<xs:extension base="xs:decimal"> |
| |
|
|
583 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
584 |
<xs:attribute name="cde" type="xs:string" default="2955385" /> |
| |
|
|
585 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
586 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| 478 |
</xs:sequence> |
|
587 |
</xs:extension> |
| |
|
|
588 |
</xs:simpleContent> |
| |
| 512 |
|
<> |
622 |
<xs:element name="performance_status_assessment_eastern_cooperative_oncology_group_scale" nillable="true"> |
| |
|
|
623 |
<xs:complexType mixed="true"> |
| |
|
|
624 |
<xs:simpleContent> |
| |
|
|
625 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
626 |
<xs:enumeration value="" /> |
| |
|
|
627 |
<xs:enumeration value="0" /> |
| |
|
|
628 |
<xs:enumeration value="1" /> |
| |
|
|
629 |
<xs:enumeration value="2" /> |
| |
|
|
630 |
<xs:enumeration value="3" /> |
| |
|
|
631 |
<xs:enumeration value="4" /> |
| |
|
|
632 |
<xs:enumeration value="5" /> |
| |
|
|
633 |
<xs:attribute name="cde" type="xs:string" default="88" /> |
| |
|
|
634 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
635 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
636 |
</xs:restriction> |
| |
|
|
637 |
</xs:simpleContent> |
| |
|
|
638 |
</xs:complexType> |
| |
|
|
639 |
</xs:element> |
| |
| |
|
-+ |
641 |
<xs:element name="performance_status_assessment_timepoint_category" nillable="true"> |
| |
|
|
642 |
<xs:complexType mixed="true"> |
| |
|
|
643 |
<xs:simpleContent> |
| |
|
|
644 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
645 |
<xs:enumeration value="" /> |
| |
|
|
646 |
<xs:enumeration value="Post-adjuvant therapy" /> |
| |
|
|
647 |
<xs:enumeration value="Pre-adjuvant therapy" /> |
| |
|
|
648 |
<xs:enumeration value="Preoperative" /> |
| |
|
|
649 |
<xs:enumeration value="Other" /> |
| |
|
|
650 |
<xs:enumeration value="5" /> |
| |
|
|
651 |
<xs:attribute name="cde" type="xs:string" default="2792763" /> |
| |
|
|
652 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
653 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
654 |
</xs:restriction> |
| |
|
|
655 |
</xs:simpleContent> |
| |
|
|
656 |
</xs:complexType> |
| |
|
|
657 |
</xs:element> |
| |
| |
|
-+ |
659 |
<xs:element name="performance_status_assessment_timepoint_category_other_text" nillable="true"> |
| |
|
|
660 |
<xs:complexType> |
| |
|
|
661 |
<xs:simpleContent> |
| |
|
|
662 |
<xs:extension base="xs:string"> |
| |
|
|
663 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
664 |
<xs:attribute name="cde" type="xs:string" default="3151756" /> |
| |
|
|
665 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
666 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
667 |
</xs:extension> |
| |
|
|
668 |
</xs:simpleContent> |
| |
|
|
669 |
</xs:complexType> |
| |
|
|
670 |
</xs:element> |
| |
| 584 |
<xs:element name="histological_type" nillable="true"> |
<> |
740 |
<xs:element name="neoplasm_histologic_type_name" nillable="true"> |
| |
| |
|
-+ |
770 |
<xs:element name="neoplasm_histologic_grade" nillable="true"> |
| |
|
|
771 |
<xs:complexType mixed="true"> |
| |
|
|
772 |
<xs:simpleContent> |
| |
|
|
773 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
774 |
<xs:enumeration value="" /> |
| |
|
|
775 |
<xs:enumeration value="G1" /> |
| |
|
|
776 |
<xs:enumeration value="G2" /> |
| |
|
|
777 |
<xs:enumeration value="G3" /> |
| |
|
|
778 |
<xs:enumeration value="G4" /> |
| |
|
|
779 |
<xs:enumeration value="GX" /> |
| |
|
|
780 |
<xs:attribute name="cde" type="xs:string" default="2785839" /> |
| |
|
|
781 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
782 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
783 |
</xs:restriction> |
| |
|
|
784 |
</xs:simpleContent> |
| |
|
|
785 |
</xs:complexType> |
| |
|
|
786 |
</xs:element> |
| |
| |
|
-+ |
788 |
<xs:element name="first_pathologic_diagnosis_biospecimen_acquisition_method_type" nillable="true"> |
| |
|
|
789 |
<xs:complexType mixed="true"> |
| |
|
|
790 |
<xs:simpleContent> |
| |
|
|
791 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
792 |
<xs:enumeration value="" /> |
| |
|
|
793 |
<xs:enumeration value="Cytology (e.g. Peritoneal or pleural fluid)" /> |
| |
|
|
794 |
<xs:enumeration value="Biopsy (cervical / CT-guided / Other)" /> |
| |
|
|
795 |
<xs:enumeration value="Cone Biopsy / LEEP" /> |
| |
|
|
796 |
<xs:enumeration value="Lymph node sampling or dissection" /> |
| |
|
|
797 |
<xs:enumeration value="Other method, specify:" /> |
| |
|
|
798 |
<xs:attribute name="cde" type="xs:string" default="2757941" /> |
| |
|
|
799 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
800 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
801 |
</xs:restriction> |
| |
|
|
802 |
</xs:simpleContent> |
| |
|
|
803 |
</xs:complexType> |
| |
|
|
804 |
</xs:element> |
| |
| 627 |
<xs:element name="lymph_node_location_positive_pathology_names"> |
+- |
|
|
| 628 |
<xs:complexType> |
|
|
|
| 629 |
<xs:sequence > |
|
|
|
| 630 |
<xs:element ref="lymph_node_location_positive_pathology_name" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| 631 |
</xs:sequence> |
|
|
|
| 632 |
</xs:complexType> |
|
|
|
| 633 |
</xs:element> |
|
|
|
| |
| |
|
-+ |
924 |
<xs:element name="lymph_node_examined_count" nillable="true"> |
| |
|
|
925 |
<xs:complexType> |
| |
|
|
926 |
<xs:simpleContent> |
| |
|
|
927 |
<xs:extension base="xs:integer"> |
| |
|
|
928 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
929 |
<xs:attribute name="cde" type="xs:string" default="3" /> |
| |
|
|
930 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
931 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
932 |
</xs:extension> |
| |
|
|
933 |
</xs:simpleContent> |
| |
|
|
934 |
</xs:complexType> |
| |
|
|
935 |
</xs:element> |
| |
| |
|
-+ |
937 |
<xs:element name="positive_finding_lymph_node_hematoxylin_and_eosin_staining_microscopy_count" nillable="true"> |
| |
|
|
938 |
<xs:complexType> |
| |
|
|
939 |
<xs:simpleContent> |
| |
|
|
940 |
<xs:extension base="xs:integer"> |
| |
|
|
941 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
942 |
<xs:attribute name="cde" type="xs:string" default="3086388" /> |
| |
|
|
943 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
944 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
945 |
</xs:extension> |
| |
|
|
946 |
</xs:simpleContent> |
| |
|
|
947 |
</xs:complexType> |
| |
|
|
948 |
</xs:element> |
| |
| |
|
-+ |
950 |
<xs:element name="positive_finding_lymph_node_keratin_immunohistochemistry_staining_method_count" nillable="true"> |
| |
|
|
951 |
<xs:complexType> |
| |
|
|
952 |
<xs:simpleContent> |
| |
|
|
953 |
<xs:extension base="xs:integer"> |
| |
|
|
954 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
955 |
<xs:attribute name="cde" type="xs:string" default="3086383" /> |
| |
|
|
956 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
957 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
958 |
</xs:extension> |
| |
|
|
959 |
</xs:simpleContent> |
| |
|
|
960 |
</xs:complexType> |
| |
|
|
961 |
</xs:element> |
| |
| |
|
-+ |
993 |
<xs:element name="cervical_tumor_pathologic_t_v7_stage" nillable="true"> |
| |
|
|
994 |
<xs:complexType mixed="true"> |
| |
|
|
995 |
<xs:simpleContent> |
| |
|
|
996 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
997 |
<xs:enumeration value="" /> |
| |
|
|
998 |
<xs:enumeration value="TX" /> |
| |
|
|
999 |
<xs:enumeration value="T0" /> |
| |
|
|
1000 |
<xs:enumeration value="Tis" /> |
| |
|
|
1001 |
<xs:enumeration value="Tis (DCIS)" /> |
| |
|
|
1002 |
<xs:enumeration value="Tis (LCIS)" /> |
| |
|
|
1003 |
<xs:enumeration value="Tis (Paget's)" /> |
| |
|
|
1004 |
<xs:enumeration value="T1mi" /> |
| |
|
|
1005 |
<xs:enumeration value="T1" /> |
| |
|
|
1006 |
<xs:enumeration value="T1a" /> |
| |
|
|
1007 |
<xs:enumeration value="T1b" /> |
| |
|
|
1008 |
<xs:enumeration value="T1b1" /> |
| |
|
|
1009 |
<xs:enumeration value="T1b2" /> |
| |
|
|
1010 |
<xs:enumeration value="T1c" /> |
| |
|
|
1011 |
<xs:enumeration value="T2" /> |
| |
|
|
1012 |
<xs:enumeration value="T2a" /> |
| |
|
|
1013 |
<xs:enumeration value="T2b" /> |
| |
|
|
1014 |
<xs:enumeration value="T2c" /> |
| |
|
|
1015 |
<xs:enumeration value="Ta" /> |
| |
|
|
1016 |
<xs:enumeration value="T3" /> |
| |
|
|
1017 |
<xs:enumeration value="T3a" /> |
| |
|
|
1018 |
<xs:enumeration value="T3b" /> |
| |
|
|
1019 |
<xs:enumeration value="T3c" /> |
| |
|
|
1020 |
<xs:enumeration value="T4" /> |
| |
|
|
1021 |
<xs:enumeration value="T4a" /> |
| |
|
|
1022 |
<xs:enumeration value="T4b" /> |
| |
|
|
1023 |
<xs:enumeration value="T4c" /> |
| |
|
|
1024 |
<xs:enumeration value="T4d" /> |
| |
|
|
1025 |
<xs:enumeration value="T1a1" /> |
| |
|
|
1026 |
<xs:enumeration value="T1a2" /> |
| |
|
|
1027 |
<xs:enumeration value="T2a1" /> |
| |
|
|
1028 |
<xs:enumeration value="T2a2" /> |
| |
| |
|
-+ |
1030 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
1031 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4.1" /> |
| |
|
|
1032 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1033 |
</xs:restriction> |
| |
|
|
1034 |
</xs:simpleContent> |
| |
|
|
1035 |
</xs:complexType> |
| |
|
|
1036 |
</xs:element> |
| |
| 771 |
<xs:element name="gynecologic_tumor_grouping_figo_stage" nillable="true"> |
<> |
1038 |
<xs:element name="cervical_tumor_pathologic_n_v7_stage" nillable="true"> |
| |
| |
|
-+ |
1043 |
<xs:enumeration value="NX" /> |
| |
|
|
1044 |
<xs:enumeration value="N0" /> |
| |
|
|
1045 |
<xs:enumeration value="N0 (i-)" /> |
| |
|
|
1046 |
<xs:enumeration value="N0 (i+)" /> |
| |
|
|
1047 |
<xs:enumeration value="N0 (mol-)" /> |
| |
|
|
1048 |
<xs:enumeration value="N0 (mol+)" /> |
| |
|
|
1049 |
<xs:enumeration value="N1" /> |
| |
|
|
1050 |
<xs:enumeration value="N1mi" /> |
| |
|
|
1051 |
<xs:enumeration value="N1a" /> |
| |
|
|
1052 |
<xs:enumeration value="N1b" /> |
| |
|
|
1053 |
<xs:enumeration value="N1bI" /> |
| |
|
|
1054 |
<xs:enumeration value="N1bII" /> |
| |
|
|
1055 |
<xs:enumeration value="N1bIII" /> |
| |
|
|
1056 |
<xs:enumeration value="N1bIV" /> |
| |
|
|
1057 |
<xs:enumeration value="N1c" /> |
| |
|
|
1058 |
<xs:enumeration value="N2" /> |
| |
|
|
1059 |
<xs:enumeration value="N2a" /> |
| |
|
|
1060 |
<xs:enumeration value="N2b" /> |
| |
|
|
1061 |
<xs:enumeration value="N3" /> |
| |
|
|
1062 |
<xs:enumeration value="N3a" /> |
| |
|
|
1063 |
<xs:enumeration value="N3b" /> |
| |
|
|
1064 |
<xs:enumeration value="N3c" /> |
| |
|
|
1065 |
<xs:enumeration value="N4" /> |
| |
|
|
1066 |
<xs:attribute name="cde" type="xs:string" default="3203106" /> |
| |
|
|
1067 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4.1" /> |
| |
|
|
1068 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1069 |
</xs:restriction> |
| |
|
|
1070 |
</xs:simpleContent> |
| |
|
|
1071 |
</xs:complexType> |
| |
|
|
1072 |
</xs:element> |
| |
| |
|
-+ |
1074 |
<xs:element name="cervical_tumor_pathologic_m_stage_cervical_cancer_pathologic_distant_metastasis_tnm_finding_v7_stage" nillable="true"> |
| |
|
|
1075 |
<xs:complexType mixed="true"> |
| |
|
|
1076 |
<xs:simpleContent> |
| |
|
|
1077 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1078 |
<xs:enumeration value="" /> |
| |
|
|
1079 |
<xs:enumeration value="MX" /> |
| |
|
|
1080 |
<xs:enumeration value="M0" /> |
| |
|
|
1081 |
<xs:enumeration value="M1" /> |
| |
|
|
1082 |
<xs:enumeration value="M1a" /> |
| |
|
|
1083 |
<xs:enumeration value="M1b" /> |
| |
|
|
1084 |
<xs:enumeration value="M1c" /> |
| |
|
|
1085 |
<xs:enumeration value="cM0 (i+)" /> |
| |
|
|
1086 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
1087 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4.1" /> |
| |
|
|
1088 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1089 |
</xs:restriction> |
| |
|
|
1090 |
</xs:simpleContent> |
| |
|
|
1091 |
</xs:complexType> |
| |
|
|
1092 |
</xs:element> |
| |
| |
|
-+ |
1094 |
<xs:element name="cervical_carcinoma_clinical_stage" nillable="true"> |
| |
|
|
1095 |
<xs:complexType mixed="true"> |
| |
|
|
1096 |
<xs:simpleContent> |
| |
|
|
1097 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1098 |
<xs:enumeration value="" /> |
| |
| 779 |
<xs:enumeration value="Stage IA1" /> |
+- |
|
|
| 780 |
<xs:enumeration value="Stage IA2" /> |
|
|
|
| |
| 782 |
<xs:enumeration value="Stage IB1" /> |
+- |
|
|
| 783 |
<xs:enumeration value="Stage IB2" /> |
|
|
|
| 784 |
<xs:enumeration value="Stage IC" /> |
|
|
|
| |
| 786 |
<xs:enumeration value="Stage IIA" /> |
+- |
|
|
| 787 |
<xs:enumeration value="Stage IIB" /> |
|
|
|
| |
| 797 |
<xs:attribute name="cde" type="xs:string" default="3225684" /> |
<> |
1113 |
<xs:attribute name="cde" type="xs:string" default="2753341" /> |
| 798 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
1114 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
| 859 |
<xs:extension base="utility:number_or_null"> |
<> |
1175 |
<xs:extension base="xs:decimal"> |
| |
| 971 |
<xs:element name="human_papillomavirus_types"> |
+- |
|
|
| 972 |
<xs:complexType> |
|
|
|
| 973 |
<xs:sequence > |
|
|
|
| 974 |
<xs:element ref="human_papillomavirus_type" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| 975 |
</xs:sequence> |
|
|
|
| 976 |
</xs:complexType> |
|
|
|
| 977 |
</xs:element> |
|
|
|
| |
| 1074 |
<xs:extension base="utility:number_or_null"> |
<> |
1382 |
<xs:extension base="xs:decimal"> |
| |
| |
|
-+ |
1444 |
<xs:element name="patient_death_reason" nillable="true"> |
| |
|
|
1445 |
<xs:complexType mixed="true"> |
| |
|
|
1446 |
<xs:simpleContent> |
| |
|
|
1447 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1448 |
<xs:enumeration value="" /> |
| |
|
|
1449 |
<xs:enumeration value="Cervical Cancer" /> |
| |
|
|
1450 |
<xs:enumeration value="Other, specify" /> |
| |
|
|
1451 |
<xs:attribute name="cde" type="xs:string" default="2554674" /> |
| |
|
|
1452 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1453 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1454 |
</xs:restriction> |
| |
|
|
1455 |
</xs:simpleContent> |
| |
|
|
1456 |
</xs:complexType> |
| |
|
|
1457 |
</xs:element> |
| |
| |
|
-+ |
1459 |
<xs:element name="death_cause_text" nillable="true"> |
| |
|
|
1460 |
<xs:complexType> |
| |
|
|
1461 |
<xs:simpleContent> |
| |
|
|
1462 |
<xs:extension base="xs:string"> |
| |
|
|
1463 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1464 |
<xs:attribute name="cde" type="xs:string" default="2004150" /> |
| |
|
|
1465 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1466 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1467 |
</xs:extension> |
| |
|
|
1468 |
</xs:simpleContent> |
| |
|
|
1469 |
</xs:complexType> |
| |
|
|
1470 |
</xs:element> |
| |
| |
|
-+ |
1472 |
<xs:element name="day_of_performance_status_follow_up_score" nillable="true"> |
| |
|
|
1473 |
<xs:complexType> |
| |
|
|
1474 |
<xs:simpleContent> |
| |
|
|
1475 |
<xs:extension base="utility:generic_day"> |
| |
|
|
1476 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1477 |
<xs:attribute name="cde" type="xs:string" default="3121372" /> |
| |
|
|
1478 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1479 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1480 |
</xs:extension> |
| |
|
|
1481 |
</xs:simpleContent> |
| |
|
|
1482 |
</xs:complexType> |
| |
|
|
1483 |
</xs:element> |
| |
| |
|
-+ |
1485 |
<xs:element name="month_of_performance_status_follow_up_score_event" nillable="true"> |
| |
|
|
1486 |
<xs:complexType> |
| |
|
|
1487 |
<xs:simpleContent> |
| |
|
|
1488 |
<xs:extension base="utility:generic_month"> |
| |
|
|
1489 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1490 |
<xs:attribute name="cde" type="xs:string" default="3121370" /> |
| |
|
|
1491 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1492 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1493 |
</xs:extension> |
| |
|
|
1494 |
</xs:simpleContent> |
| |
|
|
1495 |
</xs:complexType> |
| |
|
|
1496 |
</xs:element> |
| |
| |
|
-+ |
1498 |
<xs:element name="year_of_performance_status_follow_up_score" nillable="true"> |
| |
|
|
1499 |
<xs:complexType> |
| |
|
|
1500 |
<xs:simpleContent> |
| |
|
|
1501 |
<xs:extension base="utility:generic_year"> |
| |
|
|
1502 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1503 |
<xs:attribute name="cde" type="xs:string" default="3121374" /> |
| |
|
|
1504 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1505 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1506 |
</xs:extension> |
| |
|
|
1507 |
</xs:simpleContent> |
| |
|
|
1508 |
</xs:complexType> |
| |
|
|
1509 |
</xs:element> |
| |
| |
|
-+ |
1511 |
<xs:element name="days_to_performance_status_follow_up_score"> |
| |
|
|
1512 |
<xs:complexType mixed="true"> |
| |
|
|
1513 |
<xs:simpleContent> |
| |
|
|
1514 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1515 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
1516 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1517 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1518 |
</xs:restriction> |
| |
|
|
1519 |
</xs:simpleContent> |
| |
|
|
1520 |
</xs:complexType> |
| |
|
|
1521 |
</xs:element> |
| |
| |
|
-+ |
1523 |
<xs:element name="primary_therapy_outcome_success_type" nillable="true"> |
| |
|
|
1524 |
<xs:complexType mixed="true"> |
| |
|
|
1525 |
<xs:simpleContent> |
| |
|
|
1526 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1527 |
<xs:enumeration value="" /> |
| |
|
|
1528 |
<xs:enumeration value="Progressive Disease" /> |
| |
|
|
1529 |
<xs:enumeration value="Stable Disease" /> |
| |
|
|
1530 |
<xs:enumeration value="Partial Response" /> |
| |
|
|
1531 |
<xs:enumeration value="Complete Remission/Response" /> |
| |
|
|
1532 |
<xs:enumeration value="Not Applicable" /> |
| |
|
|
1533 |
<xs:attribute name="cde" type="xs:string" default="2786727" /> |
| |
|
|
1534 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1535 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1536 |
</xs:restriction> |
| |
|
|
1537 |
</xs:simpleContent> |
| |
|
|
1538 |
</xs:complexType> |
| |
|
|
1539 |
</xs:element> |
| |
| |
|
-+ |
1541 |
<xs:element name="new_neoplasm_event_type" nillable="true"> |
| |
|
|
1542 |
<xs:complexType mixed="true"> |
| |
|
|
1543 |
<xs:simpleContent> |
| |
|
|
1544 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1545 |
<xs:enumeration value="" /> |
| |
|
|
1546 |
<xs:enumeration value="Locoregional Disease" /> |
| |
|
|
1547 |
<xs:enumeration value="New Primary Tumor" /> |
| |
|
|
1548 |
<xs:enumeration value="Metastatic" /> |
| |
|
|
1549 |
<xs:enumeration value="Not Applicable" /> |
| |
|
|
1550 |
<xs:attribute name="cde" type="xs:string" default="3119721" /> |
| |
|
|
1551 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1552 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1553 |
</xs:restriction> |
| |
|
|
1554 |
</xs:simpleContent> |
| |
|
|
1555 |
</xs:complexType> |
| |
|
|
1556 |
</xs:element> |
| |
| |
|
-+ |
1558 |
<xs:element name="new_neoplasm_event_occurrence_anatomic_site" nillable="true"> |
| |
|
|
1559 |
<xs:complexType mixed="true"> |
| |
|
|
1560 |
<xs:simpleContent> |
| |
|
|
1561 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1562 |
<xs:enumeration value="" /> |
| |
|
|
1563 |
<xs:enumeration value="Cervix" /> |
| |
|
|
1564 |
<xs:enumeration value="Head & Neck" /> |
| |
|
|
1565 |
<xs:enumeration value="Lung" /> |
| |
|
|
1566 |
<xs:enumeration value="Vulva" /> |
| |
|
|
1567 |
<xs:enumeration value="Anus" /> |
| |
|
|
1568 |
<xs:enumeration value="Other, specify" /> |
| |
|
|
1569 |
<xs:attribute name="cde" type="xs:string" default="3108271" /> |
| |
|
|
1570 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1571 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1572 |
</xs:restriction> |
| |
|
|
1573 |
</xs:simpleContent> |
| |
|
|
1574 |
</xs:complexType> |
| |
|
|
1575 |
</xs:element> |
| |
| |
|
-+ |
1577 |
<xs:element name="new_neoplasm_occurrence_anatomic_site_text" nillable="true"> |
| |
|
|
1578 |
<xs:complexType> |
| |
|
|
1579 |
<xs:simpleContent> |
| |
|
|
1580 |
<xs:extension base="xs:string"> |
| |
|
|
1581 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1582 |
<xs:attribute name="cde" type="xs:string" default="3128033" /> |
| |
|
|
1583 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1584 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1585 |
</xs:extension> |
| |
|
|
1586 |
</xs:simpleContent> |
| |
|
|
1587 |
</xs:complexType> |
| |
|
|
1588 |
</xs:element> |
| |
| |
|
-+ |
1590 |
<xs:element name="new_neoplasm_event_post_initial_therapy_diagnosis_method_type" nillable="true"> |
| |
|
|
1591 |
<xs:complexType mixed="true"> |
| |
|
|
1592 |
<xs:simpleContent> |
| |
|
|
1593 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1594 |
<xs:enumeration value="" /> |
| |
|
|
1595 |
<xs:enumeration value="Tumor Resection" /> |
| |
|
|
1596 |
<xs:enumeration value="Cytology" /> |
| |
|
|
1597 |
<xs:enumeration value="Not Applicable" /> |
| |
|
|
1598 |
<xs:enumeration value="Other, specify" /> |
| |
|
|
1599 |
<xs:attribute name="cde" type="xs:string" default="3151113" /> |
| |
|
|
1600 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1601 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1602 |
</xs:restriction> |
| |
|
|
1603 |
</xs:simpleContent> |
| |
|
|
1604 |
</xs:complexType> |
| |
|
|
1605 |
</xs:element> |
| |
| |
|
-+ |
1607 |
<xs:element name="new_neoplasm_event_post_initial_therapy_diagnosis_method_text" nillable="true"> |
| |
|
|
1608 |
<xs:complexType> |
| |
|
|
1609 |
<xs:simpleContent> |
| |
|
|
1610 |
<xs:extension base="xs:string"> |
| |
|
|
1611 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1612 |
<xs:attribute name="cde" type="xs:string" default="3151116" /> |
| |
|
|
1613 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1614 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1615 |
</xs:extension> |
| |
|
|
1616 |
</xs:simpleContent> |
| |
|
|
1617 |
</xs:complexType> |
| |
|
|
1618 |
</xs:element> |
| |
| |
|
-+ |
1620 |
<xs:element name="residual_disease_post_new_tumor_event_margin_status" nillable="true"> |
| |
|
|
1621 |
<xs:complexType mixed="true"> |
| |
|
|
1622 |
<xs:simpleContent> |
| |
|
|
1623 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1624 |
<xs:enumeration value="" /> |
| |
|
|
1625 |
<xs:enumeration value="R0" /> |
| |
|
|
1626 |
<xs:enumeration value="R1" /> |
| |
|
|
1627 |
<xs:enumeration value="R2" /> |
| |
|
|
1628 |
<xs:enumeration value="RX" /> |
| |
|
|
1629 |
<xs:attribute name="cde" type="xs:string" default="3104061" /> |
| |
|
|
1630 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1631 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1632 |
</xs:restriction> |
| |
|
|
1633 |
</xs:simpleContent> |
| |
|
|
1634 |
</xs:complexType> |
| |
|
|
1635 |
</xs:element> |
| |
| |
|
-+ |
1637 |
<xs:element name="radiation_therapy_not_administered_reason" nillable="true"> |
| |
|
|
1638 |
<xs:complexType mixed="true"> |
| |
|
|
1639 |
<xs:simpleContent> |
| |
|
|
1640 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1641 |
<xs:enumeration value="" /> |
| |
|
|
1642 |
<xs:enumeration value="Adverse event/complications" /> |
| |
|
|
1643 |
<xs:enumeration value="Scheduling problems" /> |
| |
|
|
1644 |
<xs:enumeration value="Participant refusal" /> |
| |
|
|
1645 |
<xs:enumeration value="Not done per treating physician discretion" /> |
| |
|
|
1646 |
<xs:enumeration value="Other" /> |
| |
|
|
1647 |
<xs:attribute name="cde" type="xs:string" default="2733266" /> |
| |
|
|
1648 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1649 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1650 |
</xs:restriction> |
| |
|
|
1651 |
</xs:simpleContent> |
| |
|
|
1652 |
</xs:complexType> |
| |
|
|
1653 |
</xs:element> |
| |
| |
|
-+ |
1655 |
<xs:element name="radiation_therapy_not_administered_specify" nillable="true"> |
| |
|
|
1656 |
<xs:complexType> |
| |
|
|
1657 |
<xs:simpleContent> |
| |
|
|
1658 |
<xs:extension base="xs:string"> |
| |
|
|
1659 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1660 |
<xs:attribute name="cde" type="xs:string" default="2733267" /> |
| |
|
|
1661 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1662 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1663 |
</xs:extension> |
| |
|
|
1664 |
</xs:simpleContent> |
| |
|
|
1665 |
</xs:complexType> |
| |
|
|
1666 |
</xs:element> |
| |
| |
|
-+ |
1668 |
<xs:element name="brachytherapy_method_type" nillable="true"> |
| |
|
|
1669 |
<xs:complexType mixed="true"> |
| |
|
|
1670 |
<xs:simpleContent> |
| |
|
|
1671 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1672 |
<xs:enumeration value="" /> |
| |
|
|
1673 |
<xs:enumeration value="LDR" /> |
| |
|
|
1674 |
<xs:enumeration value="HDR" /> |
| |
|
|
1675 |
<xs:enumeration value="Other" /> |
| |
|
|
1676 |
<xs:attribute name="cde" type="xs:string" default="2966127" /> |
| |
|
|
1677 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1678 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1679 |
</xs:restriction> |
| |
|
|
1680 |
</xs:simpleContent> |
| |
|
|
1681 |
</xs:complexType> |
| |
|
|
1682 |
</xs:element> |
| |
| |
|
-+ |
1684 |
<xs:element name="brachytherapy_method_other_specify_text" nillable="true"> |
| |
|
|
1685 |
<xs:complexType> |
| |
|
|
1686 |
<xs:simpleContent> |
| |
|
|
1687 |
<xs:extension base="xs:string"> |
| |
|
|
1688 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1689 |
<xs:attribute name="cde" type="xs:string" default="3150976" /> |
| |
|
|
1690 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1691 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1692 |
</xs:extension> |
| |
|
|
1693 |
</xs:simpleContent> |
| |
|
|
1694 |
</xs:complexType> |
| |
|
|
1695 |
</xs:element> |
| |
| |
|
-+ |
1697 |
<xs:element name="day_of_brachytherapy_begin_occurrence" nillable="true"> |
| |
|
|
1698 |
<xs:complexType> |
| |
|
|
1699 |
<xs:simpleContent> |
| |
|
|
1700 |
<xs:extension base="utility:generic_day"> |
| |
|
|
1701 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1702 |
<xs:attribute name="cde" type="xs:string" default="3150980" /> |
| |
|
|
1703 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1704 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1705 |
</xs:extension> |
| |
|
|
1706 |
</xs:simpleContent> |
| |
|
|
1707 |
</xs:complexType> |
| |
|
|
1708 |
</xs:element> |
| |
| |
|
-+ |
1710 |
<xs:element name="month_of_brachytherapy_begin_occurrence" nillable="true"> |
| |
|
|
1711 |
<xs:complexType> |
| |
|
|
1712 |
<xs:simpleContent> |
| |
|
|
1713 |
<xs:extension base="utility:generic_month"> |
| |
|
|
1714 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1715 |
<xs:attribute name="cde" type="xs:string" default="3150979" /> |
| |
|
|
1716 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1717 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1718 |
</xs:extension> |
| |
|
|
1719 |
</xs:simpleContent> |
| |
|
|
1720 |
</xs:complexType> |
| |
|
|
1721 |
</xs:element> |
| |
| |
|
-+ |
1723 |
<xs:element name="year_of_brachytherapy_begin_occurrence" nillable="true"> |
| |
|
|
1724 |
<xs:complexType> |
| |
|
|
1725 |
<xs:simpleContent> |
| |
|
|
1726 |
<xs:extension base="utility:generic_year"> |
| |
|
|
1727 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1728 |
<xs:attribute name="cde" type="xs:string" default="3150981" /> |
| |
|
|
1729 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1730 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1731 |
</xs:extension> |
| |
|
|
1732 |
</xs:simpleContent> |
| |
|
|
1733 |
</xs:complexType> |
| |
|
|
1734 |
</xs:element> |
| |
| |
|
-+ |
1736 |
<xs:element name="days_to_brachytherapy_begin_occurrence"> |
| |
|
|
1737 |
<xs:complexType mixed="true"> |
| |
|
|
1738 |
<xs:simpleContent> |
| |
|
|
1739 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1740 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
1741 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1742 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1743 |
</xs:restriction> |
| |
|
|
1744 |
</xs:simpleContent> |
| |
|
|
1745 |
</xs:complexType> |
| |
|
|
1746 |
</xs:element> |
| |
| |
|
-+ |
1748 |
<xs:element name="day_of_brachytherapy_end_occurrence" nillable="true"> |
| |
|
|
1749 |
<xs:complexType> |
| |
|
|
1750 |
<xs:simpleContent> |
| |
|
|
1751 |
<xs:extension base="utility:generic_day"> |
| |
|
|
1752 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1753 |
<xs:attribute name="cde" type="xs:string" default="3151011" /> |
| |
|
|
1754 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1755 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1756 |
</xs:extension> |
| |
|
|
1757 |
</xs:simpleContent> |
| |
|
|
1758 |
</xs:complexType> |
| |
|
|
1759 |
</xs:element> |
| |
| |
|
-+ |
1761 |
<xs:element name="month_of_brachytherapy_end_occurrence" nillable="true"> |
| |
|
|
1762 |
<xs:complexType> |
| |
|
|
1763 |
<xs:simpleContent> |
| |
|
|
1764 |
<xs:extension base="utility:generic_month"> |
| |
|
|
1765 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1766 |
<xs:attribute name="cde" type="xs:string" default="3151002" /> |
| |
|
|
1767 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1768 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1769 |
</xs:extension> |
| |
|
|
1770 |
</xs:simpleContent> |
| |
|
|
1771 |
</xs:complexType> |
| |
|
|
1772 |
</xs:element> |
| |
| |
|
-+ |
1774 |
<xs:element name="year_of_brachytherapy_end_occurrence" nillable="true"> |
| |
|
|
1775 |
<xs:complexType> |
| |
|
|
1776 |
<xs:simpleContent> |
| |
|
|
1777 |
<xs:extension base="utility:generic_year"> |
| |
|
|
1778 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1779 |
<xs:attribute name="cde" type="xs:string" default="3151068" /> |
| |
|
|
1780 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1781 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1782 |
</xs:extension> |
| |
|
|
1783 |
</xs:simpleContent> |
| |
|
|
1784 |
</xs:complexType> |
| |
|
|
1785 |
</xs:element> |
| |
| |
|
-+ |
1787 |
<xs:element name="days_to_brachytherapy_end_occurrence"> |
| |
|
|
1788 |
<xs:complexType mixed="true"> |
| |
|
|
1789 |
<xs:simpleContent> |
| |
|
|
1790 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1791 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
1792 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
1793 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
1794 |
</xs:restriction> |
| |
|
|
1795 |
</xs:simpleContent> |
| |
|
|
1796 |
</xs:complexType> |
| |
|
|
1797 |
</xs:element> |
| |
| |
|
-+ |
1799 |
<xs:element name="brachytherapy_first_reference_point_administered_total_dose" nillable="true"> |
| |
|
|
1800 |
<xs:complexType> |
| |
|
|
1801 |
<xs:simpleContent> |
| |
|
|
1802 |
<xs:extension base="xs:decimal"> |
| |
|
|
1803 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1804 |
<xs:attribute name="cde" type="xs:string" default="3151100" /> |
| |
|
|
1805 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1806 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1807 |
<xs:attribute name="units" type="xs:string" fixed="cGy"/> |
| |
|
|
1808 |
</xs:extension> |
| |
|
|
1809 |
</xs:simpleContent> |
| |
|
|
1810 |
</xs:complexType> |
| |
|
|
1811 |
</xs:element> |
| |
| |
|
-+ |
1813 |
<xs:element name="brachytherapy_administered_status" nillable="true"> |
| |
|
|
1814 |
<xs:complexType mixed="true"> |
| |
|
|
1815 |
<xs:simpleContent> |
| |
|
|
1816 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1817 |
<xs:enumeration value="" /> |
| |
|
|
1818 |
<xs:enumeration value="Completed as planned" /> |
| |
|
|
1819 |
<xs:enumeration value="Treatment not completed" /> |
| |
|
|
1820 |
<xs:attribute name="cde" type="xs:string" default="3151103" /> |
| |
|
|
1821 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1822 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1823 |
</xs:restriction> |
| |
|
|
1824 |
</xs:simpleContent> |
| |
|
|
1825 |
</xs:complexType> |
| |
|
|
1826 |
</xs:element> |
| |
| |
|
-+ |
1828 |
<xs:element name="rt_administered_type" nillable="true"> |
| |
|
|
1829 |
<xs:complexType mixed="true"> |
| |
|
|
1830 |
<xs:simpleContent> |
| |
|
|
1831 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1832 |
<xs:enumeration value="" /> |
| |
|
|
1833 |
<xs:enumeration value="3D conformal" /> |
| |
|
|
1834 |
<xs:enumeration value="IMRT" /> |
| |
|
|
1835 |
<xs:enumeration value="External beam radiation" /> |
| |
|
|
1836 |
<xs:enumeration value="Other" /> |
| |
|
|
1837 |
<xs:attribute name="cde" type="xs:string" default="61468" /> |
| |
|
|
1838 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1839 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1840 |
</xs:restriction> |
| |
|
|
1841 |
</xs:simpleContent> |
| |
|
|
1842 |
</xs:complexType> |
| |
|
|
1843 |
</xs:element> |
| |
| |
|
-+ |
1845 |
<xs:element name="rt_pelvis_administered_total_dose" nillable="true"> |
| |
|
|
1846 |
<xs:complexType> |
| |
|
|
1847 |
<xs:simpleContent> |
| |
|
|
1848 |
<xs:extension base="xs:decimal"> |
| |
|
|
1849 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1850 |
<xs:attribute name="cde" type="xs:string" default="3006" /> |
| |
|
|
1851 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1852 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1853 |
<xs:attribute name="units" type="xs:string" fixed="cGy"/> |
| |
|
|
1854 |
</xs:extension> |
| |
|
|
1855 |
</xs:simpleContent> |
| |
|
|
1856 |
</xs:complexType> |
| |
|
|
1857 |
</xs:element> |
| |
| |
|
-+ |
1859 |
<xs:element name="external_beam_radiation_therapy_administered_paraaortic_region_lymph_node_dose" nillable="true"> |
| |
|
|
1860 |
<xs:complexType> |
| |
|
|
1861 |
<xs:simpleContent> |
| |
|
|
1862 |
<xs:extension base="xs:decimal"> |
| |
|
|
1863 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1864 |
<xs:attribute name="cde" type="xs:string" default="3151106" /> |
| |
|
|
1865 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1866 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1867 |
<xs:attribute name="units" type="xs:string" fixed="cGy"/> |
| |
|
|
1868 |
</xs:extension> |
| |
|
|
1869 |
</xs:simpleContent> |
| |
|
|
1870 |
</xs:complexType> |
| |
|
|
1871 |
</xs:element> |
| |
| |
|
-+ |
1873 |
<xs:element name="external_beam_radiation_therapy_administered_status" nillable="true"> |
| |
|
|
1874 |
<xs:complexType mixed="true"> |
| |
|
|
1875 |
<xs:simpleContent> |
| |
|
|
1876 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1877 |
<xs:enumeration value="" /> |
| |
|
|
1878 |
<xs:enumeration value="Treatment not completed" /> |
| |
|
|
1879 |
<xs:enumeration value="Completed as Planned" /> |
| |
|
|
1880 |
<xs:attribute name="cde" type="xs:string" default="3151107" /> |
| |
|
|
1881 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1882 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1883 |
</xs:restriction> |
| |
|
|
1884 |
</xs:simpleContent> |
| |
|
|
1885 |
</xs:complexType> |
| |
|
|
1886 |
</xs:element> |
| |
| |
|
-+ |
1888 |
<xs:element name="adjuvant_postoperative_targeted_therapy_administered_indicator" nillable="true"> |
| |
|
|
1889 |
<xs:complexType> |
| |
|
|
1890 |
<xs:simpleContent> |
| |
|
|
1891 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
1892 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1893 |
<xs:attribute name="cde" type="xs:string" default="2785850" /> |
| |
|
|
1894 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1895 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1896 |
</xs:extension> |
| |
|
|
1897 |
</xs:simpleContent> |
| |
|
|
1898 |
</xs:complexType> |
| |
|
|
1899 |
</xs:element> |
| |
| |
|
-+ |
1901 |
<xs:element name="chemotherapy_negation_radiation_therapy_concurrent_not_administered_reason" nillable="true"> |
| |
|
|
1902 |
<xs:complexType mixed="true"> |
| |
|
|
1903 |
<xs:simpleContent> |
| |
|
|
1904 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1905 |
<xs:enumeration value="" /> |
| |
|
|
1906 |
<xs:enumeration value="Adverse event/ complications" /> |
| |
|
|
1907 |
<xs:enumeration value="Scheduling problems" /> |
| |
|
|
1908 |
<xs:enumeration value="Participant refusal" /> |
| |
|
|
1909 |
<xs:enumeration value="Not done per treating physicians discretion" /> |
| |
|
|
1910 |
<xs:enumeration value="Other" /> |
| |
|
|
1911 |
<xs:attribute name="cde" type="xs:string" default="3151120" /> |
| |
|
|
1912 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1913 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1914 |
</xs:restriction> |
| |
|
|
1915 |
</xs:simpleContent> |
| |
|
|
1916 |
</xs:complexType> |
| |
|
|
1917 |
</xs:element> |
| |
| |
|
-+ |
1919 |
<xs:element name="chemotherapy_negation_radiation_therapy_concurrent_administered_text" nillable="true"> |
| |
|
|
1920 |
<xs:complexType> |
| |
|
|
1921 |
<xs:simpleContent> |
| |
|
|
1922 |
<xs:extension base="xs:string"> |
| |
|
|
1923 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1924 |
<xs:attribute name="cde" type="xs:string" default="3151824" /> |
| |
|
|
1925 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1926 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1927 |
</xs:extension> |
| |
|
|
1928 |
</xs:simpleContent> |
| |
|
|
1929 |
</xs:complexType> |
| |
|
|
1930 |
</xs:element> |
| |
| |
|
-+ |
1932 |
<xs:element name="chemotherapy_regimen_type" nillable="true"> |
| |
|
|
1933 |
<xs:complexType mixed="true"> |
| |
|
|
1934 |
<xs:simpleContent> |
| |
|
|
1935 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
1936 |
<xs:enumeration value="" /> |
| |
|
|
1937 |
<xs:enumeration value="Carboplatin" /> |
| |
|
|
1938 |
<xs:enumeration value="Cisplatin" /> |
| |
|
|
1939 |
<xs:enumeration value="Other" /> |
| |
|
|
1940 |
<xs:attribute name="cde" type="xs:string" default="2007212" /> |
| |
|
|
1941 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1942 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1943 |
</xs:restriction> |
| |
|
|
1944 |
</xs:simpleContent> |
| |
|
|
1945 |
</xs:complexType> |
| |
|
|
1946 |
</xs:element> |
| |
| |
|
-+ |
1948 |
<xs:element name="other_chemotherapy_agent_administration_specify" nillable="true"> |
| |
|
|
1949 |
<xs:complexType> |
| |
|
|
1950 |
<xs:simpleContent> |
| |
|
|
1951 |
<xs:extension base="xs:string"> |
| |
|
|
1952 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1953 |
<xs:attribute name="cde" type="xs:string" default="2426129" /> |
| |
|
|
1954 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1955 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1956 |
</xs:extension> |
| |
|
|
1957 |
</xs:simpleContent> |
| |
|
|
1958 |
</xs:complexType> |
| |
|
|
1959 |
</xs:element> |
| |
| |
|
-+ |
1961 |
<xs:element name="day_of_chemotherapy_start" nillable="true"> |
| |
|
|
1962 |
<xs:complexType> |
| |
|
|
1963 |
<xs:simpleContent> |
| |
|
|
1964 |
<xs:extension base="utility:generic_day"> |
| |
|
|
1965 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1966 |
<xs:attribute name="cde" type="xs:string" default="2897052" /> |
| |
|
|
1967 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1968 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1969 |
</xs:extension> |
| |
|
|
1970 |
</xs:simpleContent> |
| |
|
|
1971 |
</xs:complexType> |
| |
|
|
1972 |
</xs:element> |
| |
| |
|
-+ |
1974 |
<xs:element name="month_of_chemotherapy_start" nillable="true"> |
| |
|
|
1975 |
<xs:complexType> |
| |
|
|
1976 |
<xs:simpleContent> |
| |
|
|
1977 |
<xs:extension base="utility:generic_month"> |
| |
|
|
1978 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1979 |
<xs:attribute name="cde" type="xs:string" default="2897050" /> |
| |
|
|
1980 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1981 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1982 |
</xs:extension> |
| |
|
|
1983 |
</xs:simpleContent> |
| |
|
|
1984 |
</xs:complexType> |
| |
|
|
1985 |
</xs:element> |
| |
| |
|
-+ |
1987 |
<xs:element name="year_of_chemotherapy_start" nillable="true"> |
| |
|
|
1988 |
<xs:complexType> |
| |
|
|
1989 |
<xs:simpleContent> |
| |
|
|
1990 |
<xs:extension base="utility:generic_year"> |
| |
|
|
1991 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
1992 |
<xs:attribute name="cde" type="xs:string" default="2897054" /> |
| |
|
|
1993 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
1994 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
1995 |
</xs:extension> |
| |
|
|
1996 |
</xs:simpleContent> |
| |
|
|
1997 |
</xs:complexType> |
| |
|
|
1998 |
</xs:element> |
| |
| |
|
-+ |
2000 |
<xs:element name="days_to_chemotherapy_start"> |
| |
|
|
2001 |
<xs:complexType mixed="true"> |
| |
|
|
2002 |
<xs:simpleContent> |
| |
|
|
2003 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
2004 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
2005 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
2006 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
2007 |
</xs:restriction> |
| |
|
|
2008 |
</xs:simpleContent> |
| |
|
|
2009 |
</xs:complexType> |
| |
|
|
2010 |
</xs:element> |
| |
| |
|
-+ |
2012 |
<xs:element name="day_of_chemotherapy_end" nillable="true"> |
| |
|
|
2013 |
<xs:complexType> |
| |
|
|
2014 |
<xs:simpleContent> |
| |
|
|
2015 |
<xs:extension base="utility:generic_day"> |
| |
|
|
2016 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
2017 |
<xs:attribute name="cde" type="xs:string" default="2897058" /> |
| |
|
|
2018 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
2019 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
2020 |
</xs:extension> |
| |
|
|
2021 |
</xs:simpleContent> |
| |
|
|
2022 |
</xs:complexType> |
| |
|
|
2023 |
</xs:element> |
| |
| |
|
-+ |
2025 |
<xs:element name="month_of_chemotherapy_end" nillable="true"> |
| |
|
|
2026 |
<xs:complexType> |
| |
|
|
2027 |
<xs:simpleContent> |
| |
|
|
2028 |
<xs:extension base="utility:generic_month"> |
| |
|
|
2029 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
2030 |
<xs:attribute name="cde" type="xs:string" default="2897056" /> |
| |
|
|
2031 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
2032 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
2033 |
</xs:extension> |
| |
|
|
2034 |
</xs:simpleContent> |
| |
|
|
2035 |
</xs:complexType> |
| |
|
|
2036 |
</xs:element> |
| |
| |
|
-+ |
2038 |
<xs:element name="year_of_chemotherapy_end" nillable="true"> |
| |
|
|
2039 |
<xs:complexType> |
| |
|
|
2040 |
<xs:simpleContent> |
| |
|
|
2041 |
<xs:extension base="utility:generic_year"> |
| |
|
|
2042 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
2043 |
<xs:attribute name="cde" type="xs:string" default="2897060" /> |
| |
|
|
2044 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
2045 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
2046 |
</xs:extension> |
| |
|
|
2047 |
</xs:simpleContent> |
| |
|
|
2048 |
</xs:complexType> |
| |
|
|
2049 |
</xs:element> |
| |
| |
|
-+ |
2051 |
<xs:element name="days_to_chemotherapy_end"> |
| |
|
|
2052 |
<xs:complexType mixed="true"> |
| |
|
|
2053 |
<xs:simpleContent> |
| |
|
|
2054 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
2055 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
2056 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
2057 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
2058 |
</xs:restriction> |
| |
|
|
2059 |
</xs:simpleContent> |
| |
|
|
2060 |
</xs:complexType> |
| |
|
|
2061 |
</xs:element> |
| |
| |
|
-+ |
2063 |
<xs:element name="dose_frequency_text" nillable="true"> |
| |
|
|
2064 |
<xs:complexType mixed="true"> |
| |
|
|
2065 |
<xs:simpleContent> |
| |
|
|
2066 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
2067 |
<xs:enumeration value="" /> |
| |
|
|
2068 |
<xs:enumeration value="Every hour" /> |
| |
|
|
2069 |
<xs:enumeration value="Five times daily" /> |
| |
|
|
2070 |
<xs:enumeration value="Four times daily" /> |
| |
|
|
2071 |
<xs:enumeration value="Three times daily" /> |
| |
|
|
2072 |
<xs:enumeration value="Twice daily" /> |
| |
|
|
2073 |
<xs:enumeration value="Every 24 hours" /> |
| |
|
|
2074 |
<xs:enumeration value="Every other day" /> |
| |
|
|
2075 |
<xs:enumeration value="Twice a week" /> |
| |
|
|
2076 |
<xs:enumeration value="Once weekly" /> |
| |
|
|
2077 |
<xs:attribute name="cde" type="xs:string" default="2179580" /> |
| |
|
|
2078 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
2079 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
2080 |
</xs:restriction> |
| |
|
|
2081 |
</xs:simpleContent> |
| |
|
|
2082 |
</xs:complexType> |
| |
|
|
2083 |
</xs:element> |
| |
| |
|
-+ |
2085 |
<xs:element name="agent_total_dose_count" nillable="true"> |
| |
|
|
2086 |
<xs:complexType> |
| |
|
|
2087 |
<xs:simpleContent> |
| |
|
|
2088 |
<xs:extension base="xs:decimal"> |
| |
|
|
2089 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
2090 |
<xs:attribute name="cde" type="xs:string" default="2180805" /> |
| |
|
|
2091 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
2092 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
2093 |
</xs:extension> |
| |
|
|
2094 |
</xs:simpleContent> |
| |
|
|
2095 |
</xs:complexType> |
| |
|
|
2096 |
</xs:element> |
| |
| |
|
-+ |
2098 |
<xs:element name="additional_treatment_completion_success_outcome_type" nillable="true"> |
| |
|
|
2099 |
<xs:complexType mixed="true"> |
| |
|
|
2100 |
<xs:simpleContent> |
| |
|
|
2101 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
2102 |
<xs:enumeration value="" /> |
| |
|
|
2103 |
<xs:enumeration value="Progressive Disease" /> |
| |
|
|
2104 |
<xs:enumeration value="Stable Disease" /> |
| |
|
|
2105 |
<xs:enumeration value="Partial Response" /> |
| |
|
|
2106 |
<xs:enumeration value="Complete Response" /> |
| |
|
|
2107 |
<xs:attribute name="cde" type="xs:string" default="3033278" /> |
| |
|
|
2108 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
2109 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
2110 |
</xs:restriction> |
| |
|
|
2111 |
</xs:simpleContent> |
| |
|
|
2112 |
</xs:complexType> |
| |
|
|
2113 |
</xs:element> |
| 1 |
<?xml version="1.0" encoding="utf-8" ?> |
+- |
|
|
| |
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
+- |
|
|
| 5 |
xmlns:xs="http://www.w3.org/2001/XMLSchema" |
|
|
|
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
|
|
|
| 7 |
xmlns="http://tcga.nci/bcr/xml/clinical/cesc/shared/2.5" |
|
|
|
| 8 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/cesc/shared/2.5"> |
|
|
|
| |
| 10 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
+- |
|
|
| |
| 12 |
<xs:element name="patient_death_reason" nillable="true"> |
+- |
|
|
| 13 |
<xs:complexType mixed="true"> |
|
|
|
| 14 |
<xs:simpleContent> |
|
|
|
| 15 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 16 |
<xs:enumeration value="" /> |
|
|
|
| 17 |
<xs:enumeration value="Cervical Cancer" /> |
|
|
|
| 18 |
<xs:enumeration value="Other, specify" /> |
|
|
|
| 19 |
<xs:attribute name="cde" type="xs:string" default="2554674" /> |
|
|
|
| 20 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 21 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 22 |
</xs:restriction> |
|
|
|
| 23 |
</xs:simpleContent> |
|
|
|
| 24 |
</xs:complexType> |
|
|
|
| 25 |
</xs:element> |
|
|
|
| |
| 27 |
<xs:element name="death_cause_text" nillable="true"> |
+- |
|
|
| 28 |
<xs:complexType> |
|
|
|
| 29 |
<xs:simpleContent> |
|
|
|
| 30 |
<xs:extension base="xs:string"> |
|
|
|
| 31 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 32 |
<xs:attribute name="cde" type="xs:string" default="2004150" /> |
|
|
|
| 33 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 34 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 35 |
</xs:extension> |
|
|
|
| 36 |
</xs:simpleContent> |
|
|
|
| 37 |
</xs:complexType> |
|
|
|
| 38 |
</xs:element> |
|
|
|
| |
| 40 |
<xs:element name="performance_status_assessment_timepoint_category_other_text" nillable="true"> |
+- |
|
|
| 41 |
<xs:complexType> |
|
|
|
| 42 |
<xs:simpleContent> |
|
|
|
| 43 |
<xs:extension base="xs:string"> |
|
|
|
| 44 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 45 |
<xs:attribute name="cde" type="xs:string" default="3151756" /> |
|
|
|
| 46 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 47 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 48 |
</xs:extension> |
|
|
|
| 49 |
</xs:simpleContent> |
|
|
|
| 50 |
</xs:complexType> |
|
|
|
| 51 |
</xs:element> |
|
|
|
| |
| 53 |
<xs:element name="days_to_performance_status_follow_up_score"> |
+- |
|
|
| 54 |
<xs:complexType mixed="true"> |
|
|
|
| 55 |
<xs:simpleContent> |
|
|
|
| 56 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 57 |
<xs:attribute name="cde" type="xs:string" default="" /> |
|
|
|
| 58 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 59 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 60 |
</xs:restriction> |
|
|
|
| 61 |
</xs:simpleContent> |
|
|
|
| 62 |
</xs:complexType> |
|
|
|
| 63 |
</xs:element> |
|
|
|
| |
| 65 |
<xs:element name="primary_therapy_outcome_success" nillable="true"> |
+- |
|
|
| 66 |
<xs:complexType mixed="true"> |
|
|
|
| 67 |
<xs:simpleContent> |
|
|
|
| 68 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 69 |
<xs:enumeration value="" /> |
|
|
|
| 70 |
<xs:enumeration value="Progressive Disease" /> |
|
|
|
| 71 |
<xs:enumeration value="Stable Disease" /> |
|
|
|
| 72 |
<xs:enumeration value="Partial Response" /> |
|
|
|
| 73 |
<xs:enumeration value="Complete Remission/Response" /> |
|
|
|
| 74 |
<xs:enumeration value="Not Applicable" /> |
|
|
|
| 75 |
<xs:attribute name="cde" type="xs:string" default="2786727" /> |
|
|
|
| 76 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 77 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 78 |
</xs:restriction> |
|
|
|
| 79 |
</xs:simpleContent> |
|
|
|
| 80 |
</xs:complexType> |
|
|
|
| 81 |
</xs:element> |
|
|
|
| |
| 83 |
<xs:element name="additional_treatment_completion_success_outcome" nillable="true"> |
+- |
|
|
| 84 |
<xs:complexType mixed="true"> |
|
|
|
| 85 |
<xs:simpleContent> |
|
|
|
| 86 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 87 |
<xs:enumeration value="" /> |
|
|
|
| 88 |
<xs:enumeration value="Progressive Disease" /> |
|
|
|
| 89 |
<xs:enumeration value="Stable Disease" /> |
|
|
|
| 90 |
<xs:enumeration value="Partial Response" /> |
|
|
|
| 91 |
<xs:enumeration value="Complete Response" /> |
|
|
|
| 92 |
<xs:attribute name="cde" type="xs:string" default="3033278" /> |
|
|
|
| 93 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 94 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 95 |
</xs:restriction> |
|
|
|
| 96 |
</xs:simpleContent> |
|
|
|
| 97 |
</xs:complexType> |
|
|
|
| 98 |
</xs:element> |
|
|
|
| |
| 100 |
<xs:element name="adjuvant_rad_therapy_prior_admin" nillable="true"> |
+- |
|
|
| 101 |
<xs:complexType> |
|
|
|
| 102 |
<xs:simpleContent> |
|
|
|
| 103 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 104 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 105 |
<xs:attribute name="cde" type="xs:string" default="2308" /> |
|
|
|
| 106 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 107 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 108 |
</xs:extension> |
|
|
|
| 109 |
</xs:simpleContent> |
|
|
|
| 110 |
</xs:complexType> |
|
|
|
| 111 |
</xs:element> |
|
|
|
| |
| 113 |
<xs:element name="radiation_therapy_not_administered_reason" nillable="true"> |
+- |
|
|
| 114 |
<xs:complexType mixed="true"> |
|
|
|
| 115 |
<xs:simpleContent> |
|
|
|
| 116 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 117 |
<xs:enumeration value="" /> |
|
|
|
| 118 |
<xs:enumeration value="Adverse event/complications" /> |
|
|
|
| 119 |
<xs:enumeration value="Scheduling problems" /> |
|
|
|
| 120 |
<xs:enumeration value="Participant refusal" /> |
|
|
|
| 121 |
<xs:enumeration value="Not done per treating physician discretion" /> |
|
|
|
| 122 |
<xs:enumeration value="Other" /> |
|
|
|
| 123 |
<xs:attribute name="cde" type="xs:string" default="2733266" /> |
|
|
|
| 124 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 125 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 126 |
</xs:restriction> |
|
|
|
| 127 |
</xs:simpleContent> |
|
|
|
| 128 |
</xs:complexType> |
|
|
|
| 129 |
</xs:element> |
|
|
|
| |
| 131 |
<xs:element name="radiation_therapy_not_administered_specify" nillable="true"> |
+- |
|
|
| 132 |
<xs:complexType> |
|
|
|
| 133 |
<xs:simpleContent> |
|
|
|
| 134 |
<xs:extension base="xs:string"> |
|
|
|
| 135 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 136 |
<xs:attribute name="cde" type="xs:string" default="2733267" /> |
|
|
|
| 137 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 138 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 139 |
</xs:extension> |
|
|
|
| 140 |
</xs:simpleContent> |
|
|
|
| 141 |
</xs:complexType> |
|
|
|
| 142 |
</xs:element> |
|
|
|
| |
| 144 |
<xs:element name="brachytherapy_method_type" nillable="true"> |
+- |
|
|
| 145 |
<xs:complexType mixed="true"> |
|
|
|
| 146 |
<xs:simpleContent> |
|
|
|
| 147 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 148 |
<xs:enumeration value="" /> |
|
|
|
| 149 |
<xs:enumeration value="LDR" /> |
|
|
|
| 150 |
<xs:enumeration value="HDR" /> |
|
|
|
| 151 |
<xs:enumeration value="Other" /> |
|
|
|
| 152 |
<xs:attribute name="cde" type="xs:string" default="2966127" /> |
|
|
|
| 153 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 154 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 155 |
</xs:restriction> |
|
|
|
| 156 |
</xs:simpleContent> |
|
|
|
| 157 |
</xs:complexType> |
|
|
|
| 158 |
</xs:element> |
|
|
|
| |
| 160 |
<xs:element name="brachytherapy_method_other_specify_text" nillable="true"> |
+- |
|
|
| 161 |
<xs:complexType> |
|
|
|
| 162 |
<xs:simpleContent> |
|
|
|
| 163 |
<xs:extension base="xs:string"> |
|
|
|
| 164 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 165 |
<xs:attribute name="cde" type="xs:string" default="3150976" /> |
|
|
|
| 166 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 167 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 168 |
</xs:extension> |
|
|
|
| 169 |
</xs:simpleContent> |
|
|
|
| 170 |
</xs:complexType> |
|
|
|
| 171 |
</xs:element> |
|
|
|
| |
| 173 |
<xs:element name="day_of_brachytherapy_begin_occurrence" nillable="true"> |
+- |
|
|
| 174 |
<xs:complexType> |
|
|
|
| 175 |
<xs:simpleContent> |
|
|
|
| 176 |
<xs:extension base="utility:generic_day"> |
|
|
|
| 177 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 178 |
<xs:attribute name="cde" type="xs:string" default="3150980" /> |
|
|
|
| 179 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 180 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 181 |
</xs:extension> |
|
|
|
| 182 |
</xs:simpleContent> |
|
|
|
| 183 |
</xs:complexType> |
|
|
|
| 184 |
</xs:element> |
|
|
|
| |
| 186 |
<xs:element name="month_of_brachytherapy_begin_occurrence" nillable="true"> |
+- |
|
|
| 187 |
<xs:complexType> |
|
|
|
| 188 |
<xs:simpleContent> |
|
|
|
| 189 |
<xs:extension base="utility:generic_month"> |
|
|
|
| 190 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 191 |
<xs:attribute name="cde" type="xs:string" default="3150979" /> |
|
|
|
| 192 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 193 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 194 |
</xs:extension> |
|
|
|
| 195 |
</xs:simpleContent> |
|
|
|
| 196 |
</xs:complexType> |
|
|
|
| 197 |
</xs:element> |
|
|
|
| |
| 199 |
<xs:element name="year_of_brachytherapy_begin_occurrence" nillable="true"> |
+- |
|
|
| 200 |
<xs:complexType> |
|
|
|
| 201 |
<xs:simpleContent> |
|
|
|
| 202 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 203 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 204 |
<xs:attribute name="cde" type="xs:string" default="3150981" /> |
|
|
|
| 205 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 206 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 207 |
</xs:extension> |
|
|
|
| 208 |
</xs:simpleContent> |
|
|
|
| 209 |
</xs:complexType> |
|
|
|
| 210 |
</xs:element> |
|
|
|
| |
| 212 |
<xs:element name="days_to_brachytherapy_begin_occurrence"> |
+- |
|
|
| 213 |
<xs:complexType mixed="true"> |
|
|
|
| 214 |
<xs:simpleContent> |
|
|
|
| 215 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 216 |
<xs:attribute name="cde" type="xs:string" default="" /> |
|
|
|
| 217 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 218 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 219 |
</xs:restriction> |
|
|
|
| 220 |
</xs:simpleContent> |
|
|
|
| 221 |
</xs:complexType> |
|
|
|
| 222 |
</xs:element> |
|
|
|
| |
| 224 |
<xs:element name="day_of_brachytherapy_end_occurrence" nillable="true"> |
+- |
|
|
| 225 |
<xs:complexType> |
|
|
|
| 226 |
<xs:simpleContent> |
|
|
|
| 227 |
<xs:extension base="utility:generic_day"> |
|
|
|
| 228 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 229 |
<xs:attribute name="cde" type="xs:string" default="3151011" /> |
|
|
|
| 230 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 231 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 232 |
</xs:extension> |
|
|
|
| 233 |
</xs:simpleContent> |
|
|
|
| 234 |
</xs:complexType> |
|
|
|
| 235 |
</xs:element> |
|
|
|
| |
| 237 |
<xs:element name="month_of_brachytherapy_end_occurrence" nillable="true"> |
+- |
|
|
| 238 |
<xs:complexType> |
|
|
|
| 239 |
<xs:simpleContent> |
|
|
|
| 240 |
<xs:extension base="utility:generic_month"> |
|
|
|
| 241 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 242 |
<xs:attribute name="cde" type="xs:string" default="3151002" /> |
|
|
|
| 243 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 244 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 245 |
</xs:extension> |
|
|
|
| 246 |
</xs:simpleContent> |
|
|
|
| 247 |
</xs:complexType> |
|
|
|
| 248 |
</xs:element> |
|
|
|
| |
| 250 |
<xs:element name="year_of_brachytherapy_end_occurrence" nillable="true"> |
+- |
|
|
| 251 |
<xs:complexType> |
|
|
|
| 252 |
<xs:simpleContent> |
|
|
|
| 253 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 254 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 255 |
<xs:attribute name="cde" type="xs:string" default="3151068" /> |
|
|
|
| 256 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 257 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 258 |
</xs:extension> |
|
|
|
| 259 |
</xs:simpleContent> |
|
|
|
| 260 |
</xs:complexType> |
|
|
|
| 261 |
</xs:element> |
|
|
|
| |
| 263 |
<xs:element name="days_to_brachytherapy_end_occurrence"> |
+- |
|
|
| 264 |
<xs:complexType mixed="true"> |
|
|
|
| 265 |
<xs:simpleContent> |
|
|
|
| 266 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 267 |
<xs:attribute name="cde" type="xs:string" default="" /> |
|
|
|
| 268 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 269 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 270 |
</xs:restriction> |
|
|
|
| 271 |
</xs:simpleContent> |
|
|
|
| 272 |
</xs:complexType> |
|
|
|
| 273 |
</xs:element> |
|
|
|
| |
| 275 |
<xs:element name="brachytherapy_first_reference_point_administered_total_dose" nillable="true"> |
+- |
|
|
| 276 |
<xs:complexType> |
|
|
|
| 277 |
<xs:simpleContent> |
|
|
|
| 278 |
<xs:extension base="utility:number_or_null"> |
|
|
|
| 279 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 280 |
<xs:attribute name="cde" type="xs:string" default="3151100" /> |
|
|
|
| 281 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 282 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 283 |
<xs:attribute name="units" type="xs:string" fixed="cGy"/> |
|
|
|
| 284 |
</xs:extension> |
|
|
|
| 285 |
</xs:simpleContent> |
|
|
|
| 286 |
</xs:complexType> |
|
|
|
| 287 |
</xs:element> |
|
|
|
| |
| 289 |
<xs:element name="brachytherapy_administered_status" nillable="true"> |
+- |
|
|
| 290 |
<xs:complexType mixed="true"> |
|
|
|
| 291 |
<xs:simpleContent> |
|
|
|
| 292 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 293 |
<xs:enumeration value="" /> |
|
|
|
| 294 |
<xs:enumeration value="Completed as planned" /> |
|
|
|
| 295 |
<xs:enumeration value="Treatment not completed" /> |
|
|
|
| 296 |
<xs:attribute name="cde" type="xs:string" default="3151103" /> |
|
|
|
| 297 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 298 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 299 |
</xs:restriction> |
|
|
|
| 300 |
</xs:simpleContent> |
|
|
|
| 301 |
</xs:complexType> |
|
|
|
| 302 |
</xs:element> |
|
|
|
| |
| 304 |
<xs:element name="rt_administered_type" nillable="true"> |
+- |
|
|
| 305 |
<xs:complexType mixed="true"> |
|
|
|
| 306 |
<xs:simpleContent> |
|
|
|
| 307 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 308 |
<xs:enumeration value="" /> |
|
|
|
| 309 |
<xs:enumeration value="3D conformal" /> |
|
|
|
| 310 |
<xs:enumeration value="IMRT" /> |
|
|
|
| 311 |
<xs:enumeration value="External beam radiation" /> |
|
|
|
| 312 |
<xs:enumeration value="Other" /> |
|
|
|
| 313 |
<xs:attribute name="cde" type="xs:string" default="61468" /> |
|
|
|
| 314 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 315 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 316 |
</xs:restriction> |
|
|
|
| 317 |
</xs:simpleContent> |
|
|
|
| 318 |
</xs:complexType> |
|
|
|
| 319 |
</xs:element> |
|
|
|
| |
| 321 |
<xs:element name="rt_pelvis_administered_total_dose" nillable="true"> |
+- |
|
|
| 322 |
<xs:complexType> |
|
|
|
| 323 |
<xs:simpleContent> |
|
|
|
| 324 |
<xs:extension base="utility:number_or_null"> |
|
|
|
| 325 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 326 |
<xs:attribute name="cde" type="xs:string" default="3006" /> |
|
|
|
| 327 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 328 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 329 |
<xs:attribute name="units" type="xs:string" fixed="cGy"/> |
|
|
|
| 330 |
</xs:extension> |
|
|
|
| 331 |
</xs:simpleContent> |
|
|
|
| 332 |
</xs:complexType> |
|
|
|
| 333 |
</xs:element> |
|
|
|
| |
| 335 |
<xs:element name="external_beam_radiation_therapy_administered_paraaortic_region_lymph_node_dose" nillable="true"> |
+- |
|
|
| 336 |
<xs:complexType> |
|
|
|
| 337 |
<xs:simpleContent> |
|
|
|
| 338 |
<xs:extension base="utility:number_or_null"> |
|
|
|
| 339 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 340 |
<xs:attribute name="cde" type="xs:string" default="3151106" /> |
|
|
|
| 341 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 342 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 343 |
<xs:attribute name="units" type="xs:string" fixed="cGy"/> |
|
|
|
| 344 |
</xs:extension> |
|
|
|
| 345 |
</xs:simpleContent> |
|
|
|
| 346 |
</xs:complexType> |
|
|
|
| 347 |
</xs:element> |
|
|
|
| |
| 349 |
<xs:element name="external_beam_radiation_therapy_administered_status" nillable="true"> |
+- |
|
|
| 350 |
<xs:complexType mixed="true"> |
|
|
|
| 351 |
<xs:simpleContent> |
|
|
|
| 352 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 353 |
<xs:enumeration value="" /> |
|
|
|
| 354 |
<xs:enumeration value="Treatment not completed" /> |
|
|
|
| 355 |
<xs:enumeration value="Completed as Planned" /> |
|
|
|
| 356 |
<xs:attribute name="cde" type="xs:string" default="3151107" /> |
|
|
|
| 357 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 358 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 359 |
</xs:restriction> |
|
|
|
| 360 |
</xs:simpleContent> |
|
|
|
| 361 |
</xs:complexType> |
|
|
|
| 362 |
</xs:element> |
|
|
|
| |
| 364 |
<xs:element name="chemotherapy_negation_radiation_therapy_concurrent_not_administered_reason" nillable="true"> |
+- |
|
|
| 365 |
<xs:complexType mixed="true"> |
|
|
|
| 366 |
<xs:simpleContent> |
|
|
|
| 367 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 368 |
<xs:enumeration value="" /> |
|
|
|
| 369 |
<xs:enumeration value="Adverse event/ complications" /> |
|
|
|
| 370 |
<xs:enumeration value="Scheduling problems" /> |
|
|
|
| 371 |
<xs:enumeration value="Participant refusal" /> |
|
|
|
| 372 |
<xs:enumeration value="Not done per treating physicians discretion" /> |
|
|
|
| 373 |
<xs:enumeration value="Other" /> |
|
|
|
| 374 |
<xs:attribute name="cde" type="xs:string" default="3151120" /> |
|
|
|
| 375 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 376 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 377 |
</xs:restriction> |
|
|
|
| 378 |
</xs:simpleContent> |
|
|
|
| 379 |
</xs:complexType> |
|
|
|
| 380 |
</xs:element> |
|
|
|
| |
| 382 |
<xs:element name="chemotherapy_negation_radiation_therapy_concurrent_administered_text" nillable="true"> |
+- |
|
|
| 383 |
<xs:complexType> |
|
|
|
| 384 |
<xs:simpleContent> |
|
|
|
| 385 |
<xs:extension base="xs:string"> |
|
|
|
| 386 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 387 |
<xs:attribute name="cde" type="xs:string" default="3151824" /> |
|
|
|
| 388 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 389 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 390 |
</xs:extension> |
|
|
|
| 391 |
</xs:simpleContent> |
|
|
|
| 392 |
</xs:complexType> |
|
|
|
| 393 |
</xs:element> |
|
|
|
| |
| 395 |
<xs:element name="chemotherapy_regimen_types"> |
+- |
|
|
| 396 |
<xs:complexType> |
|
|
|
| 397 |
<xs:sequence > |
|
|
|
| 398 |
<xs:element ref="chemotherapy_regimen_type" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| 399 |
</xs:sequence> |
|
|
|
| 400 |
</xs:complexType> |
|
|
|
| 401 |
</xs:element> |
|
|
|
| |
| 403 |
<xs:element name="chemotherapy_regimen_type" nillable="true"> |
+- |
|
|
| 404 |
<xs:complexType mixed="true"> |
|
|
|
| 405 |
<xs:simpleContent> |
|
|
|
| 406 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 407 |
<xs:enumeration value="" /> |
|
|
|
| 408 |
<xs:enumeration value="Carboplatin" /> |
|
|
|
| 409 |
<xs:enumeration value="Cisplatin" /> |
|
|
|
| 410 |
<xs:enumeration value="Other" /> |
|
|
|
| 411 |
<xs:attribute name="cde" type="xs:string" default="2007212" /> |
|
|
|
| 412 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 413 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 414 |
</xs:restriction> |
|
|
|
| 415 |
</xs:simpleContent> |
|
|
|
| 416 |
</xs:complexType> |
|
|
|
| 417 |
</xs:element> |
|
|
|
| |
| 419 |
<xs:element name="other_chemotherapy_agent_administration_specify" nillable="true"> |
+- |
|
|
| 420 |
<xs:complexType> |
|
|
|
| 421 |
<xs:simpleContent> |
|
|
|
| 422 |
<xs:extension base="xs:string"> |
|
|
|
| 423 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 424 |
<xs:attribute name="cde" type="xs:string" default="2426129" /> |
|
|
|
| 425 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 426 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 427 |
</xs:extension> |
|
|
|
| 428 |
</xs:simpleContent> |
|
|
|
| 429 |
</xs:complexType> |
|
|
|
| 430 |
</xs:element> |
|
|
|
| |
| 432 |
<xs:element name="day_of_chemotherapy_start" nillable="true"> |
+- |
|
|
| 433 |
<xs:complexType> |
|
|
|
| 434 |
<xs:simpleContent> |
|
|
|
| 435 |
<xs:extension base="utility:generic_day"> |
|
|
|
| 436 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 437 |
<xs:attribute name="cde" type="xs:string" default="2897052" /> |
|
|
|
| 438 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 439 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 440 |
</xs:extension> |
|
|
|
| 441 |
</xs:simpleContent> |
|
|
|
| 442 |
</xs:complexType> |
|
|
|
| 443 |
</xs:element> |
|
|
|
| |
| 445 |
<xs:element name="month_of_chemotherapy_start" nillable="true"> |
+- |
|
|
| 446 |
<xs:complexType> |
|
|
|
| 447 |
<xs:simpleContent> |
|
|
|
| 448 |
<xs:extension base="utility:generic_month"> |
|
|
|
| 449 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 450 |
<xs:attribute name="cde" type="xs:string" default="2897050" /> |
|
|
|
| 451 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 452 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 453 |
</xs:extension> |
|
|
|
| 454 |
</xs:simpleContent> |
|
|
|
| 455 |
</xs:complexType> |
|
|
|
| 456 |
</xs:element> |
|
|
|
| |
| 458 |
<xs:element name="year_of_chemotherapy_start" nillable="true"> |
+- |
|
|
| 459 |
<xs:complexType> |
|
|
|
| 460 |
<xs:simpleContent> |
|
|
|
| 461 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 462 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 463 |
<xs:attribute name="cde" type="xs:string" default="2897054" /> |
|
|
|
| 464 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 465 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 466 |
</xs:extension> |
|
|
|
| 467 |
</xs:simpleContent> |
|
|
|
| 468 |
</xs:complexType> |
|
|
|
| 469 |
</xs:element> |
|
|
|
| |
| 471 |
<xs:element name="days_to_chemotherapy_start"> |
+- |
|
|
| 472 |
<xs:complexType mixed="true"> |
|
|
|
| 473 |
<xs:simpleContent> |
|
|
|
| 474 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 475 |
<xs:attribute name="cde" type="xs:string" default="" /> |
|
|
|
| 476 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 477 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 478 |
</xs:restriction> |
|
|
|
| 479 |
</xs:simpleContent> |
|
|
|
| 480 |
</xs:complexType> |
|
|
|
| 481 |
</xs:element> |
|
|
|
| |
| 483 |
<xs:element name="day_of_chemotherapy_end" nillable="true"> |
+- |
|
|
| 484 |
<xs:complexType> |
|
|
|
| 485 |
<xs:simpleContent> |
|
|
|
| 486 |
<xs:extension base="utility:generic_day"> |
|
|
|
| 487 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 488 |
<xs:attribute name="cde" type="xs:string" default="2897058" /> |
|
|
|
| 489 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 490 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 491 |
</xs:extension> |
|
|
|
| 492 |
</xs:simpleContent> |
|
|
|
| 493 |
</xs:complexType> |
|
|
|
| 494 |
</xs:element> |
|
|
|
| |
| 496 |
<xs:element name="month_of_chemotherapy_end" nillable="true"> |
+- |
|
|
| 497 |
<xs:complexType> |
|
|
|
| 498 |
<xs:simpleContent> |
|
|
|
| 499 |
<xs:extension base="utility:generic_month"> |
|
|
|
| 500 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 501 |
<xs:attribute name="cde" type="xs:string" default="2897056" /> |
|
|
|
| 502 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 503 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 504 |
</xs:extension> |
|
|
|
| 505 |
</xs:simpleContent> |
|
|
|
| 506 |
</xs:complexType> |
|
|
|
| 507 |
</xs:element> |
|
|
|
| |
| 509 |
<xs:element name="year_of_chemotherapy_end" nillable="true"> |
+- |
|
|
| 510 |
<xs:complexType> |
|
|
|
| 511 |
<xs:simpleContent> |
|
|
|
| 512 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 513 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 514 |
<xs:attribute name="cde" type="xs:string" default="2897060" /> |
|
|
|
| 515 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 516 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 517 |
</xs:extension> |
|
|
|
| 518 |
</xs:simpleContent> |
|
|
|
| 519 |
</xs:complexType> |
|
|
|
| 520 |
</xs:element> |
|
|
|
| |
| 522 |
<xs:element name="days_to_chemotherapy_end"> |
+- |
|
|
| 523 |
<xs:complexType mixed="true"> |
|
|
|
| 524 |
<xs:simpleContent> |
|
|
|
| 525 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 526 |
<xs:attribute name="cde" type="xs:string" default="" /> |
|
|
|
| 527 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 528 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 529 |
</xs:restriction> |
|
|
|
| 530 |
</xs:simpleContent> |
|
|
|
| 531 |
</xs:complexType> |
|
|
|
| 532 |
</xs:element> |
|
|
|
| |
| 536 |
<xs:element name="concurrent_chemotherapy_dose" nillable="true"> |
+- |
|
|
| 537 |
<xs:complexType> |
|
|
|
| 538 |
<xs:simpleContent> |
|
|
|
| 539 |
<xs:extension base="xs:string"> |
|
|
|
| 540 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 541 |
<xs:attribute name="cde" type="xs:string" default="3166172" /> |
|
|
|
| 542 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 543 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 544 |
</xs:extension> |
|
|
|
| 545 |
</xs:simpleContent> |
|
|
|
| 546 |
</xs:complexType> |
|
|
|
| 547 |
</xs:element> |
|
|
|
| |
| 551 |
<xs:element name="dose_frequency_text" nillable="true"> |
+- |
|
|
| 552 |
<xs:complexType mixed="true"> |
|
|
|
| 553 |
<xs:simpleContent> |
|
|
|
| 554 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 555 |
<xs:enumeration value="" /> |
|
|
|
| 556 |
<xs:enumeration value="Every hour" /> |
|
|
|
| 557 |
<xs:enumeration value="Five times daily" /> |
|
|
|
| 558 |
<xs:enumeration value="Four times daily" /> |
|
|
|
| 559 |
<xs:enumeration value="Three times daily" /> |
|
|
|
| 560 |
<xs:enumeration value="Twice daily" /> |
|
|
|
| 561 |
<xs:enumeration value="Every 24 hours" /> |
|
|
|
| 562 |
<xs:enumeration value="Every other day" /> |
|
|
|
| 563 |
<xs:enumeration value="Twice a week" /> |
|
|
|
| 564 |
<xs:enumeration value="Once weekly" /> |
|
|
|
| 565 |
<xs:attribute name="cde" type="xs:string" default="2179580" /> |
|
|
|
| 566 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 567 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 568 |
</xs:restriction> |
|
|
|
| 569 |
</xs:simpleContent> |
|
|
|
| 570 |
</xs:complexType> |
|
|
|
| 571 |
</xs:element> |
|
|
|
| |
| 573 |
<xs:element name="agent_total_dose_count" nillable="true"> |
+- |
|
|
| 574 |
<xs:complexType> |
|
|
|
| 575 |
<xs:simpleContent> |
|
|
|
| 576 |
<xs:extension base="utility:number_or_null"> |
|
|
|
| 577 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 578 |
<xs:attribute name="cde" type="xs:string" default="2180805" /> |
|
|
|
| 579 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 580 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 581 |
</xs:extension> |
|
|
|
| 582 |
</xs:simpleContent> |
|
|
|
| 583 |
</xs:complexType> |
|
|
|
| 584 |
</xs:element> |
|
|
|
| |
| 586 |
<xs:element name="new_neoplasm_event_occurrence_anatomic_site" nillable="true"> |
+- |
|
|
| 587 |
<xs:complexType mixed="true"> |
|
|
|
| 588 |
<xs:simpleContent> |
|
|
|
| 589 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 590 |
<xs:enumeration value="" /> |
|
|
|
| 591 |
<xs:enumeration value="Cervix" /> |
|
|
|
| 592 |
<xs:enumeration value="Head & Neck" /> |
|
|
|
| 593 |
<xs:enumeration value="Lung" /> |
|
|
|
| 594 |
<xs:enumeration value="Vulva" /> |
|
|
|
| 595 |
<xs:enumeration value="Anus" /> |
|
|
|
| 596 |
<xs:enumeration value="Other, specify" /> |
|
|
|
| 597 |
<xs:attribute name="cde" type="xs:string" default="3108271" /> |
|
|
|
| 598 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 599 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 600 |
</xs:restriction> |
|
|
|
| 601 |
</xs:simpleContent> |
|
|
|
| 602 |
</xs:complexType> |
|
|
|
| 603 |
</xs:element> |
|
|
|
| |
| 605 |
<xs:element name="new_neoplasm_occurrence_anatomic_site_text" nillable="true"> |
+- |
|
|
| 606 |
<xs:complexType> |
|
|
|
| 607 |
<xs:simpleContent> |
|
|
|
| 608 |
<xs:extension base="xs:string"> |
|
|
|
| 609 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 610 |
<xs:attribute name="cde" type="xs:string" default="3128033" /> |
|
|
|
| 611 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 612 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 613 |
</xs:extension> |
|
|
|
| 614 |
</xs:simpleContent> |
|
|
|
| 615 |
</xs:complexType> |
|
|
|
| 616 |
</xs:element> |
|
|
|
| |
| 618 |
<xs:element name="new_neoplasm_event_post_initial_therapy_diagnosis_method_type" nillable="true"> |
+- |
|
|
| 619 |
<xs:complexType mixed="true"> |
|
|
|
| 620 |
<xs:simpleContent> |
|
|
|
| 621 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 622 |
<xs:enumeration value="" /> |
|
|
|
| 623 |
<xs:enumeration value="Tumor Resection" /> |
|
|
|
| 624 |
<xs:enumeration value="Cytology" /> |
|
|
|
| 625 |
<xs:enumeration value="Not Applicable" /> |
|
|
|
| 626 |
<xs:enumeration value="Other, specify" /> |
|
|
|
| 627 |
<xs:attribute name="cde" type="xs:string" default="3151113" /> |
|
|
|
| 628 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 629 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 630 |
</xs:restriction> |
|
|
|
| 631 |
</xs:simpleContent> |
|
|
|
| 632 |
</xs:complexType> |
|
|
|
| 633 |
</xs:element> |
|
|
|
| |
| 635 |
<xs:element name="new_neoplasm_event_post_initial_therapy_diagnosis_method_text" nillable="true"> |
+- |
|
|
| 636 |
<xs:complexType> |
|
|
|
| 637 |
<xs:simpleContent> |
|
|
|
| 638 |
<xs:extension base="xs:string"> |
|
|
|
| 639 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 640 |
<xs:attribute name="cde" type="xs:string" default="3151116" /> |
|
|
|
| 641 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 642 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 643 |
</xs:extension> |
|
|
|
| 644 |
</xs:simpleContent> |
|
|
|
| 645 |
</xs:complexType> |
|
|
|
| 646 |
</xs:element> |
|
|
|
| |
| 648 |
</xs:schema> |
+- |
|
|
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:coad_read_shared="http://tcga.nci/bcr/xml/clinical/shared/coad_read/2.5" |
|
|
|
| 10 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 11 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 12 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 13 |
xmlns:follow_up_v1.0="http://tcga.nci/bcr/xml/clinical/coad/followup/2.5/1.0" |
|
|
|
| 14 |
xmlns="http://tcga.nci/bcr/xml/clinical/coad/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/coad/2.4" |
| 15 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/coad/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/coad/2.4" |
| |
| 31 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/coad/followup/2.5/1.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/coad/followup/2.5/TCGA_BCR.COAD_Clinical_FollowUp_v1.0.xsd" /> |
|
|
|
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/coad_read/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_COAD_READ_Elements.xsd" /> |
|
|
|
| |
| 48 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 56 |
<xs:element ref="coad_read_shared:histological_type" /> |
<> |
49 |
<xs:element ref="histological_type" /> |
| |
| 140 |
<xs:element ref="shared:residual_tumor" /> |
+- |
|
|
| 141 |
<xs:element ref="shared:anatomic_organ_subdivision" /> |
|
|
|
| 142 |
<xs:element ref="shared:primary_lymph_node_presentation_assessment" /> |
|
|
|
| 143 |
<xs:element ref="shared:lymph_node_examined_count" /> |
|
|
|
| 144 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_he" /> |
|
|
|
| 145 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_ihc" /> |
|
|
|
| |
| 149 |
<xs:element ref="coad_read_shared:tumor_stage" /> |
<> |
136 |
<xs:element ref="tumor_stage" /> |
| |
|
|
137 |
<xs:element ref="residual_tumor" /> |
| |
|
|
138 |
<xs:element ref="anatomic_organ_subdivision" /> |
| |
|
|
139 |
<xs:element ref="lymphnodes_examined" /> |
| |
|
|
140 |
<xs:element ref="number_of_lymphnodes_examined" /> |
| |
|
|
141 |
<xs:element ref="number_of_lymphnodes_positive_by_he" /> |
| |
|
|
142 |
<xs:element ref="number_of_lymphnodes_positive_by_ihc" /> |
| 150 |
<xs:element ref="coad_read_shared:primary_tumor_pathologic_spread" /> |
|
143 |
<xs:element ref="primary_tumor_pathologic_spread" /> |
| 151 |
<xs:element ref="coad_read_shared:lymphnode_pathologic_spread" /> |
|
144 |
<xs:element ref="lymphnode_pathologic_spread" /> |
| 152 |
<xs:element ref="coad_read_shared:distant_metastasis_pathologic_spread" /> |
|
145 |
<xs:element ref="distant_metastasis_pathologic_spread" /> |
| 153 |
<xs:element ref="coad_read_shared:preoperative_pretreatment_cea_level" /> |
|
146 |
<xs:element ref="preoperative_pretreatment_cea_level" /> |
| 154 |
<xs:element ref="coad_read_shared:non_nodal_tumor_deposits" /> |
|
147 |
<xs:element ref="non_nodal_tumor_deposits" /> |
| 155 |
<xs:element ref="coad_read_shared:circumferential_resection_margin" /> |
|
148 |
<xs:element ref="circumferential_resection_margin" /> |
| 156 |
<xs:element ref="shared:venous_invasion" /> |
|
149 |
<xs:element ref="vascular_invasion_present" /> |
| 157 |
<xs:element ref="shared:lymphatic_invasion" /> |
|
150 |
<xs:element ref="lymphatic_invasion_present" /> |
| 158 |
<xs:element ref="coad_read_shared:perineural_invasion_present" /> |
|
151 |
<xs:element ref="perineural_invasion_present" /> |
| 159 |
<xs:element ref="coad_read_shared:microsatellite_instability" /> |
|
152 |
<xs:element ref="microsatellite_instability" /> |
| 160 |
<xs:element ref="coad_read_shared:number_of_loci_tested" /> |
|
153 |
<xs:element ref="number_of_loci_tested" /> |
| 161 |
<xs:element ref="coad_read_shared:number_of_abnormal_loci" /> |
|
154 |
<xs:element ref="number_of_abnormal_loci" /> |
| 162 |
<xs:element ref="coad_read_shared:kras_gene_analysis_performed" /> |
|
155 |
<xs:element ref="kras_gene_analysis_performed" /> |
| 163 |
<xs:element ref="coad_read_shared:kras_mutation_found" /> |
|
156 |
<xs:element ref="kras_mutation_found" /> |
| 164 |
<xs:element ref="coad_read_shared:kras_mutation_codon" /> |
|
157 |
<xs:element ref="kras_mutation_codon" /> |
| 165 |
<xs:element ref="coad_read_shared:braf_gene_analysis_performed" /> |
|
158 |
<xs:element ref="braf_gene_analysis_performed" /> |
| 166 |
<xs:element ref="coad_read_shared:braf_gene_analysis_result" /> |
|
159 |
<xs:element ref="braf_gene_analysis_result" /> |
| 167 |
<xs:element ref="coad_read_shared:synchronous_colon_cancer_present" /> |
|
160 |
<xs:element ref="synchronous_colon_cancer_present" /> |
| 168 |
<xs:element ref="coad_read_shared:history_of_colon_polyps" /> |
|
161 |
<xs:element ref="history_of_colon_polyps" /> |
| 169 |
<xs:element ref="coad_read_shared:colon_polyps_present" /> |
|
162 |
<xs:element ref="colon_polyps_present" /> |
| 170 |
<xs:element ref="coad_read_shared:loss_expression_of_mismatch_repair_proteins_by_ihc" /> |
|
163 |
<xs:element ref="loss_expression_of_mismatch_repair_proteins_by_ihc" /> |
| 171 |
<xs:element ref="coad_read_shared:loss_expression_of_mismatch_repair_proteins_by_ihc_results" /> |
|
164 |
<xs:element ref="loss_expression_of_mismatch_repair_proteins_by_ihc_results" /> |
| 172 |
<xs:element ref="coad_read_shared:number_of_first_degree_relatives_with_cancer_diagnosis" /> |
|
165 |
<xs:element ref="number_of_first_degree_relatives_with_cancer_diagnosis" /> |
| |
| 176 |
|
<> |
168 |
</xs:sequence> |
| |
|
|
169 |
</xs:complexType> |
| |
|
|
170 |
</xs:element> |
| |
| 177 |
<xs:element ref="coad_read_shared:clinical_cqcf" /> |
<> |
172 |
<xs:element name="lymphnodes_examined" nillable="true"> |
| |
|
|
173 |
<xs:complexType> |
| |
|
|
174 |
<xs:simpleContent> |
| |
|
|
175 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
176 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
177 |
<xs:attribute name="cde" type="xs:string" default="2200396" /> |
| |
|
|
178 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
179 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
180 |
</xs:extension> |
| |
|
|
181 |
</xs:simpleContent> |
| |
|
|
182 |
</xs:complexType> |
| |
|
|
183 |
</xs:element> |
| |
| |
|
<> |
185 |
<xs:element name="number_of_abnormal_loci" nillable="true"> |
| 179 |
<xs:element name="follow_ups"> |
|
186 |
<xs:complexType mixed="true"> |
| 180 |
<xs:annotation> |
|
187 |
<xs:simpleContent> |
| |
|
|
188 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
189 |
<xs:attribute name="cde" type="xs:string" default="3107129" /> |
| |
|
|
190 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
191 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
192 |
</xs:restriction> |
| |
|
|
193 |
</xs:simpleContent> |
| |
|
|
194 |
</xs:complexType> |
| |
|
|
195 |
</xs:element> |
| |
| 181 |
<xs:documentation>We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
<> |
197 |
<xs:element name="number_of_first_degree_relatives_with_cancer_diagnosis" nillable="true"> |
| |
|
|
198 |
<xs:complexType mixed="true"> |
| |
|
|
199 |
<xs:simpleContent> |
| |
|
|
200 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
201 |
<xs:attribute name="cde" type="xs:string" default="3107205" /> |
| |
|
|
202 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
203 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
204 |
</xs:restriction> |
| 182 |
</xs:annotation> |
|
205 |
</xs:simpleContent> |
| |
|
|
206 |
</xs:complexType> |
| |
|
|
207 |
</xs:element> |
| |
| |
|
-+ |
209 |
<xs:element name="loss_expression_of_mismatch_repair_proteins_by_ihc_results"> |
| |
| 184 |
<xs:sequence> |
<> |
|
|
| 185 |
<xs:element ref="follow_up_v1.0:follow_up_v1.0" minOccurs="0" maxOccurs="unbounded" /> |
|
211 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
| |
|
|
212 |
<xs:element ref="loss_expression_of_mismatch_repair_proteins_by_ihc_result" /> |
| |
| |
|
<> |
217 |
<xs:element name="loss_expression_of_mismatch_repair_proteins_by_ihc_result" nillable="true"> |
| |
|
|
218 |
<xs:complexType mixed="true"> |
| |
|
|
219 |
<xs:simpleContent> |
| |
|
|
220 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
221 |
<xs:enumeration value="" /> |
| |
|
|
222 |
<xs:enumeration value="MLH1 Expressed" /> |
| |
|
|
223 |
<xs:enumeration value="MLH1 Not Expressed" /> |
| |
|
|
224 |
<xs:enumeration value="MSH2 Expressed" /> |
| |
|
|
225 |
<xs:enumeration value="MSH2 Not Expressed" /> |
| |
|
|
226 |
<xs:enumeration value="PMS2 Expressed" /> |
| |
|
|
227 |
<xs:enumeration value="PMS2 Not Expressed" /> |
| |
|
|
228 |
<xs:enumeration value="MSH6 Expressed" /> |
| |
|
|
229 |
<xs:enumeration value="MSH6 Not Expressed" /> |
| |
|
|
230 |
<xs:attribute name="cde" type="xs:string" default="3105496" /> |
| |
|
|
231 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
232 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
233 |
</xs:restriction> |
| |
|
|
234 |
</xs:simpleContent> |
| |
|
|
235 |
</xs:complexType> |
| 190 |
</xs:sequence> |
|
236 |
</xs:element> |
| |
| |
|
-+ |
238 |
<xs:element name="braf_gene_analysis_result" nillable="true"> |
| |
|
|
239 |
<xs:complexType mixed="true"> |
| |
|
|
240 |
<xs:simpleContent> |
| |
|
|
241 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
242 |
<xs:enumeration value="" /> |
| |
|
|
243 |
<xs:enumeration value="Normal" /> |
| |
|
|
244 |
<xs:enumeration value="Abnormal" /> |
| |
|
|
245 |
<xs:attribute name="cde" type="xs:string" default="3107189" /> |
| |
|
|
246 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
247 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
248 |
</xs:restriction> |
| |
|
|
249 |
</xs:simpleContent> |
| |
| |
|
-+ |
253 |
<xs:element name="loss_expression_of_mismatch_repair_proteins_by_ihc" nillable="true"> |
| |
|
|
254 |
<xs:complexType> |
| |
|
|
255 |
<xs:simpleContent> |
| |
|
|
256 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
257 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
258 |
<xs:attribute name="cde" type="xs:string" default="3123153" /> |
| |
|
|
259 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
260 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
261 |
</xs:extension> |
| |
|
|
262 |
</xs:simpleContent> |
| |
|
|
263 |
</xs:complexType> |
| |
|
|
264 |
</xs:element> |
| |
| |
|
-+ |
266 |
<xs:element name="braf_gene_analysis_performed" nillable="true"> |
| |
|
|
267 |
<xs:complexType> |
| |
|
|
268 |
<xs:simpleContent> |
| |
|
|
269 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
270 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
271 |
<xs:attribute name="cde" type="xs:string" default="3123151" /> |
| |
|
|
272 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
273 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
274 |
</xs:extension> |
| |
|
|
275 |
</xs:simpleContent> |
| |
|
|
276 |
</xs:complexType> |
| |
|
|
277 |
</xs:element> |
| |
| |
|
-+ |
279 |
<xs:element name="number_of_loci_tested" nillable="true"> |
| |
|
|
280 |
<xs:complexType mixed="true"> |
| |
|
|
281 |
<xs:simpleContent> |
| |
|
|
282 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
283 |
<xs:attribute name="cde" type="xs:string" default="3107127" /> |
| |
|
|
284 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
285 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
286 |
</xs:restriction> |
| |
|
|
287 |
</xs:simpleContent> |
| |
|
|
288 |
</xs:complexType> |
| |
|
|
289 |
</xs:element> |
| |
| |
|
-+ |
291 |
<xs:element name="kras_mutation_codon" nillable="true"> |
| |
|
|
292 |
<xs:complexType mixed="true"> |
| |
|
|
293 |
<xs:simpleContent> |
| |
|
|
294 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
295 |
<xs:enumeration value="" /> |
| |
|
|
296 |
<xs:enumeration value="12" /> |
| |
|
|
297 |
<xs:enumeration value="13" /> |
| |
|
|
298 |
<xs:enumeration value="61" /> |
| |
|
|
299 |
<xs:attribute name="cde" type="xs:string" default="3124509" /> |
| |
|
|
300 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
301 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
302 |
</xs:restriction> |
| |
|
|
303 |
</xs:simpleContent> |
| |
|
|
304 |
</xs:complexType> |
| |
|
|
305 |
</xs:element> |
| |
| |
|
-+ |
307 |
<xs:element name="kras_mutation_found" nillable="true"> |
| |
|
|
308 |
<xs:complexType> |
| |
|
|
309 |
<xs:simpleContent> |
| |
|
|
310 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
311 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
312 |
<xs:attribute name="cde" type="xs:string" default="2932340" /> |
| |
|
|
313 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
314 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
315 |
</xs:extension> |
| |
|
|
316 |
</xs:simpleContent> |
| |
|
|
317 |
</xs:complexType> |
| |
|
|
318 |
</xs:element> |
| |
| |
|
-+ |
320 |
<xs:element name="kras_gene_analysis_performed" nillable="true"> |
| |
|
|
321 |
<xs:complexType> |
| |
|
|
322 |
<xs:simpleContent> |
| |
|
|
323 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
324 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
325 |
<xs:attribute name="cde" type="xs:string" default="3123147" /> |
| |
|
|
326 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
327 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
328 |
</xs:extension> |
| |
|
|
329 |
</xs:simpleContent> |
| |
|
|
330 |
</xs:complexType> |
| |
|
|
331 |
</xs:element> |
| |
| |
|
-+ |
333 |
<xs:element name="number_of_lymphnodes_positive_by_he" nillable="true"> |
| |
|
|
334 |
<xs:complexType mixed="true"> |
| |
|
|
335 |
<xs:simpleContent> |
| |
|
|
336 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
337 |
<xs:attribute name="cde" type="xs:string" default="3086388" /> |
| |
|
|
338 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
339 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
340 |
</xs:restriction> |
| |
|
|
341 |
</xs:simpleContent> |
| |
|
|
342 |
</xs:complexType> |
| |
|
|
343 |
</xs:element> |
| |
| |
|
-+ |
345 |
<xs:element name="preoperative_pretreatment_cea_level" nillable="true"> |
| |
|
|
346 |
<xs:complexType mixed="true"> |
| |
|
|
347 |
<xs:simpleContent> |
| |
|
|
348 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
349 |
<xs:attribute name="cde" type="xs:string" default="2716510" /> |
| |
|
|
350 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
351 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
352 |
</xs:restriction> |
| |
|
|
353 |
</xs:simpleContent> |
| |
|
|
354 |
</xs:complexType> |
| |
|
|
355 |
</xs:element> |
| |
| |
|
-+ |
357 |
<xs:element name="non_nodal_tumor_deposits" nillable="true"> |
| |
|
|
358 |
<xs:complexType> |
| |
|
|
359 |
<xs:simpleContent> |
| |
|
|
360 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
361 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
362 |
<xs:attribute name="cde" type="xs:string" default="3107051" /> |
| |
|
|
363 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
364 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
365 |
</xs:extension> |
| |
|
|
366 |
</xs:simpleContent> |
| |
|
|
367 |
</xs:complexType> |
| |
|
|
368 |
</xs:element> |
| |
| |
|
-+ |
370 |
<xs:element name="circumferential_resection_margin" nillable="true"> |
| |
|
|
371 |
<xs:complexType mixed="true"> |
| |
|
|
372 |
<xs:simpleContent> |
| |
|
|
373 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
374 |
<xs:attribute name="cde" type="xs:string" default="64202" /> |
| |
|
|
375 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
376 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
377 |
</xs:restriction> |
| |
|
|
378 |
</xs:simpleContent> |
| |
|
|
379 |
</xs:complexType> |
| |
|
|
380 |
</xs:element> |
| |
| |
|
-+ |
382 |
<xs:element name="vascular_invasion_present" nillable="true"> |
| |
|
|
383 |
<xs:complexType> |
| |
|
|
384 |
<xs:simpleContent> |
| |
|
|
385 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
386 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
387 |
<xs:attribute name="cde" type="xs:string" default="64358" /> |
| |
|
|
388 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
389 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
390 |
</xs:extension> |
| |
|
|
391 |
</xs:simpleContent> |
| |
|
|
392 |
</xs:complexType> |
| |
|
|
393 |
</xs:element> |
| |
| |
|
-+ |
395 |
<xs:element name="lymphatic_invasion_present" nillable="true"> |
| |
|
|
396 |
<xs:complexType> |
| |
|
|
397 |
<xs:simpleContent> |
| |
|
|
398 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
399 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
400 |
<xs:attribute name="cde" type="xs:string" default="64171" /> |
| |
|
|
401 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
402 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
403 |
</xs:extension> |
| |
|
|
404 |
</xs:simpleContent> |
| |
|
|
405 |
</xs:complexType> |
| |
|
|
406 |
</xs:element> |
| |
| |
|
-+ |
408 |
<xs:element name="perineural_invasion_present" nillable="true"> |
| |
|
|
409 |
<xs:complexType> |
| |
|
|
410 |
<xs:simpleContent> |
| |
|
|
411 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
412 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
413 |
<xs:attribute name="cde" type="xs:string" default="64181" /> |
| |
|
|
414 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
415 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
416 |
</xs:extension> |
| |
|
|
417 |
</xs:simpleContent> |
| |
|
|
418 |
</xs:complexType> |
| |
|
|
419 |
</xs:element> |
| |
| |
|
-+ |
421 |
<xs:element name="microsatellite_instability" nillable="true"> |
| |
|
|
422 |
<xs:complexType> |
| |
|
|
423 |
<xs:simpleContent> |
| |
|
|
424 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
425 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
426 |
<xs:attribute name="cde" type="xs:string" default="3123142" /> |
| |
|
|
427 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
428 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
429 |
</xs:extension> |
| |
|
|
430 |
</xs:simpleContent> |
| |
|
|
431 |
</xs:complexType> |
| |
|
|
432 |
</xs:element> |
| |
| |
|
-+ |
434 |
<xs:element name="synchronous_colon_cancer_present" nillable="true"> |
| |
|
|
435 |
<xs:complexType> |
| |
|
|
436 |
<xs:simpleContent> |
| |
|
|
437 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
438 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
439 |
<xs:attribute name="cde" type="xs:string" default="2185953" /> |
| |
|
|
440 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
441 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
442 |
</xs:extension> |
| |
|
|
443 |
</xs:simpleContent> |
| |
|
|
444 |
</xs:complexType> |
| |
|
|
445 |
</xs:element> |
| |
| |
|
-+ |
447 |
<xs:element name="history_of_colon_polyps" nillable="true"> |
| |
|
|
448 |
<xs:complexType> |
| |
|
|
449 |
<xs:simpleContent> |
| |
|
|
450 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
451 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
452 |
<xs:attribute name="cde" type="xs:string" default="3107197" /> |
| |
|
|
453 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
454 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
455 |
</xs:extension> |
| |
|
|
456 |
</xs:simpleContent> |
| |
|
|
457 |
</xs:complexType> |
| |
|
|
458 |
</xs:element> |
| |
| |
|
-+ |
460 |
<xs:element name="colon_polyps_present" nillable="true"> |
| |
|
|
461 |
<xs:complexType> |
| |
|
|
462 |
<xs:simpleContent> |
| |
|
|
463 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
464 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
465 |
<xs:attribute name="cde" type="xs:string" default="64184" /> |
| |
|
|
466 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
467 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
468 |
</xs:extension> |
| |
|
|
469 |
</xs:simpleContent> |
| |
|
|
470 |
</xs:complexType> |
| |
|
|
471 |
</xs:element> |
| |
| |
|
-+ |
474 |
<xs:element name="anatomic_organ_subdivision" nillable="true"> |
| |
|
|
475 |
<xs:complexType mixed="true"> |
| |
|
|
476 |
<xs:simpleContent> |
| |
|
|
477 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
478 |
<xs:enumeration value="" /> |
| |
|
|
479 |
<xs:enumeration value="Cecum" /> |
| |
|
|
480 |
<xs:enumeration value="Ascending Colon" /> |
| |
|
|
481 |
<xs:enumeration value="Hepatic Flexure" /> |
| |
|
|
482 |
<xs:enumeration value="Transverse Colon" /> |
| |
|
|
483 |
<xs:enumeration value="Splenic Flexure" /> |
| |
|
|
484 |
<xs:enumeration value="Descending Colon" /> |
| |
|
|
485 |
<xs:enumeration value="Sigmoid Colon" /> |
| |
|
|
486 |
<xs:enumeration value="Rectosigmoid Junction" /> |
| |
|
|
487 |
<xs:attribute name="cde" type="xs:string" default="2716417" /> |
| |
|
|
488 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
489 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
490 |
</xs:restriction> |
| |
|
|
491 |
</xs:simpleContent> |
| |
|
|
492 |
</xs:complexType> |
| |
|
|
493 |
</xs:element> |
| |
| |
|
-+ |
496 |
<xs:element name="histological_type" nillable="true"> |
| |
|
|
497 |
<xs:complexType mixed="true"> |
| |
|
|
498 |
<xs:simpleContent> |
| |
|
|
499 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
500 |
<xs:attribute name="cde" type="xs:string" default="3081934" /> |
| |
|
|
501 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
502 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
503 |
</xs:restriction> |
| |
|
|
504 |
</xs:simpleContent> |
| |
|
|
505 |
</xs:complexType> |
| |
|
|
506 |
</xs:element> |
| |
| |
|
-+ |
508 |
<xs:element name="tumor_stage" nillable="true"> |
| |
|
|
509 |
<xs:complexType> |
| |
|
|
510 |
<xs:simpleContent> |
| |
|
|
511 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
512 |
<xs:enumeration value="" /> |
| |
|
|
513 |
<xs:enumeration value="Stage I" /> |
| |
|
|
514 |
<xs:enumeration value="Stage IA" /> |
| |
|
|
515 |
<xs:enumeration value="Stage IB" /> |
| |
|
|
516 |
<xs:enumeration value="Stage II" /> |
| |
|
|
517 |
<xs:enumeration value="Stage IIA" /> |
| |
|
|
518 |
<xs:enumeration value="Stage IIB" /> |
| |
|
|
519 |
<xs:enumeration value="Stage IIC" /> |
| |
|
|
520 |
<xs:enumeration value="Stage III" /> |
| |
|
|
521 |
<xs:enumeration value="Stage IIIA" /> |
| |
|
|
522 |
<xs:enumeration value="Stage IIIB" /> |
| |
|
|
523 |
<xs:enumeration value="Stage IIIC" /> |
| |
|
|
524 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
525 |
<xs:enumeration value="Stage IVA" /> |
| |
|
|
526 |
<xs:enumeration value="Stage IVB" /> |
| |
|
|
527 |
<xs:attribute name="cde" type="xs:string" default="3065862" /> |
| |
|
|
528 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
529 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
530 |
</xs:restriction> |
| |
|
|
531 |
</xs:simpleContent> |
| |
|
|
532 |
</xs:complexType> |
| |
|
|
533 |
</xs:element> |
| |
| |
|
-+ |
535 |
<xs:element name="residual_tumor" nillable="true"> |
| |
|
|
536 |
<xs:complexType> |
| |
|
|
537 |
<xs:simpleContent> |
| |
|
|
538 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
539 |
<xs:enumeration value="" /> |
| |
|
|
540 |
<xs:enumeration value="RX" /> |
| |
|
|
541 |
<xs:enumeration value="R0" /> |
| |
|
|
542 |
<xs:enumeration value="R1" /> |
| |
|
|
543 |
<xs:enumeration value="R2" /> |
| |
|
|
544 |
<xs:attribute name="cde" type="xs:string" default="2608702" /> |
| |
|
|
545 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
546 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
547 |
</xs:restriction> |
| |
|
|
548 |
</xs:simpleContent> |
| |
|
|
549 |
</xs:complexType> |
| |
|
|
550 |
</xs:element> |
| |
| |
|
-+ |
552 |
<xs:element name="primary_tumor_pathologic_spread" nillable="true"> |
| |
|
|
553 |
<xs:complexType> |
| |
|
|
554 |
<xs:simpleContent> |
| |
|
|
555 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
556 |
<xs:enumeration value="" /> |
| |
|
|
557 |
<xs:enumeration value="TX" /> |
| |
|
|
558 |
<xs:enumeration value="Tis" /> |
| |
|
|
559 |
<xs:enumeration value="T0" /> |
| |
|
|
560 |
<xs:enumeration value="T1" /> |
| |
|
|
561 |
<xs:enumeration value="T2" /> |
| |
|
|
562 |
<xs:enumeration value="T2a" /> |
| |
|
|
563 |
<xs:enumeration value="T2b" /> |
| |
|
|
564 |
<xs:enumeration value="T3" /> |
| |
|
|
565 |
<xs:enumeration value="T4" /> |
| |
|
|
566 |
<xs:enumeration value="T4a" /> |
| |
|
|
567 |
<xs:enumeration value="T4b" /> |
| |
|
|
568 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
569 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
570 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
571 |
</xs:restriction> |
| |
|
|
572 |
</xs:simpleContent> |
| |
|
|
573 |
</xs:complexType> |
| |
|
|
574 |
</xs:element> |
| |
| |
|
-+ |
576 |
<xs:element name="lymphnode_pathologic_spread" nillable="true"> |
| |
|
|
577 |
<xs:complexType> |
| |
|
|
578 |
<xs:simpleContent> |
| |
|
|
579 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
580 |
<xs:enumeration value="" /> |
| |
|
|
581 |
<xs:enumeration value="NX" /> |
| |
|
|
582 |
<xs:enumeration value="N0" /> |
| |
|
|
583 |
<xs:enumeration value="N1" /> |
| |
|
|
584 |
<xs:enumeration value="N1a" /> |
| |
|
|
585 |
<xs:enumeration value="N1b" /> |
| |
|
|
586 |
<xs:enumeration value="N1c" /> |
| |
|
|
587 |
<xs:enumeration value="N2" /> |
| |
|
|
588 |
<xs:enumeration value="N2a" /> |
| |
|
|
589 |
<xs:enumeration value="N2b" /> |
| |
|
|
590 |
<xs:attribute name="cde" type="xs:string" default="3065858" /> |
| |
|
|
591 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
592 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
593 |
</xs:restriction> |
| |
|
|
594 |
</xs:simpleContent> |
| |
|
|
595 |
</xs:complexType> |
| |
|
|
596 |
</xs:element> |
| |
| |
|
-+ |
598 |
<xs:element name="distant_metastasis_pathologic_spread" nillable="true"> |
| |
|
|
599 |
<xs:complexType> |
| |
|
|
600 |
<xs:simpleContent> |
| |
|
|
601 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
602 |
<xs:enumeration value="" /> |
| |
|
|
603 |
<xs:enumeration value="M0" /> |
| |
|
|
604 |
<xs:enumeration value="M1" /> |
| |
|
|
605 |
<xs:enumeration value="M1a" /> |
| |
|
|
606 |
<xs:enumeration value="M1b" /> |
| |
|
|
607 |
<xs:enumeration value="MX" /> |
| |
|
|
608 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
609 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
610 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
611 |
</xs:restriction> |
| |
|
|
612 |
</xs:simpleContent> |
| |
|
|
613 |
</xs:complexType> |
| |
|
|
614 |
</xs:element> |
| |
| |
|
-+ |
616 |
<xs:element name="number_of_lymphnodes_examined" nillable="true"> |
| |
|
|
617 |
<xs:complexType mixed="true"> |
| |
|
|
618 |
<xs:simpleContent> |
| |
|
|
619 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
620 |
<xs:attribute name="cde" type="xs:string" default="3" /> |
| |
|
|
621 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
622 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
623 |
</xs:restriction> |
| |
|
|
624 |
</xs:simpleContent> |
| |
|
|
625 |
</xs:complexType> |
| |
|
|
626 |
</xs:element> |
| |
| |
|
-+ |
628 |
<xs:element name="number_of_lymphnodes_positive_by_ihc" nillable="true"> |
| |
|
|
629 |
<xs:complexType mixed="true"> |
| |
|
|
630 |
<xs:simpleContent> |
| |
|
|
631 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
632 |
<xs:attribute name="cde" type="xs:string" default="3086383" /> |
| |
|
|
633 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
634 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
635 |
</xs:restriction> |
| |
|
|
636 |
</xs:simpleContent> |
| |
|
|
637 |
</xs:complexType> |
| |
|
|
638 |
</xs:element> |
| 1 |
<?xml version="1.0" encoding="utf-8"?> |
+- |
|
|
| |
| 3 |
<xs:schema xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" xmlns="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" xmlns:xs="http://www.w3.org/2001/XMLSchema" targetNamespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" elementFormDefault="qualified" version="2.5.0"> |
+- |
|
|
| 4 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd"/> |
|
|
|
| 5 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd"/> |
|
|
|
| 6 |
<xs:annotation> |
|
|
|
| 7 |
<xs:documentation xml:lang="en">Schema to define the elements of the CQCF Data.</xs:documentation> |
|
|
|
| 8 |
</xs:annotation> |
|
|
|
| 9 |
<xs:element name="biospecimen_cqcf"> |
|
|
|
| 10 |
<xs:complexType> |
|
|
|
| 11 |
<xs:sequence> |
|
|
|
| 12 |
<xs:element ref="maximum_tumor_dimension"/> |
|
|
|
| 13 |
<xs:choice> |
|
|
|
| 14 |
<xs:sequence> |
|
|
|
| 15 |
<xs:element ref="day_of_sample_procurement"/> |
|
|
|
| 16 |
<xs:element ref="month_of_sample_procurement"/> |
|
|
|
| 17 |
<xs:element ref="year_of_sample_procurement"/> |
|
|
|
| 18 |
</xs:sequence> |
|
|
|
| 19 |
<xs:element ref="days_to_sample_procurement"/> |
|
|
|
| 20 |
</xs:choice> |
|
|
|
| 21 |
<xs:element ref="method_of_sample_procurement"/> |
|
|
|
| 22 |
<xs:element ref="country"/> |
|
|
|
| 23 |
<xs:element ref="vessel_used"/> |
|
|
|
| 24 |
<xs:element ref="submitted_for_lce"/> |
|
|
|
| 25 |
<xs:element ref="sample_prescreened"/> |
|
|
|
| 26 |
<xs:element ref="top_slide_submitted"/> |
|
|
|
| 27 |
<xs:element ref="digital_image_submitted"/> |
|
|
|
| 28 |
<xs:element ref="h_and_e_tumor_slide_submitted"/> |
|
|
|
| 29 |
<xs:element ref="b_cell_tumor_slide_submitted"/> |
|
|
|
| 30 |
<xs:element ref="t_cell_tumor_slide_submitted"/> |
|
|
|
| 31 |
<xs:element ref="tumor_samples"/> |
|
|
|
| 32 |
<xs:element ref="normal_controls"/> |
|
|
|
| 33 |
<xs:choice> |
|
|
|
| 34 |
<xs:sequence> |
|
|
|
| 35 |
<xs:element ref="day_of_pathology_review"/> |
|
|
|
| 36 |
<xs:element ref="month_of_pathology_review"/> |
|
|
|
| 37 |
<xs:element ref="year_of_pathology_review"/> |
|
|
|
| 38 |
</xs:sequence> |
|
|
|
| 39 |
<xs:element ref="days_to_pathology_review"/> |
|
|
|
| 40 |
</xs:choice> |
|
|
|
| 41 |
<xs:element ref="path_confirm_tumor_nuclei_metrics"/> |
|
|
|
| 42 |
<xs:element ref="path_confirm_tumor_necrosis_metrics"/> |
|
|
|
| 43 |
<xs:element ref="path_confirm_report_attached"/> |
|
|
|
| 44 |
<xs:element ref="path_confirm_diagnosis_matching"/> |
|
|
|
| 45 |
<xs:element ref="reason_path_confirm_diagnosis_not_matching"/> |
|
|
|
| 46 |
<xs:element ref="cytogenetic_report_submitted"/> |
|
|
|
| 47 |
<xs:element ref="differential_report_submitted"/> |
|
|
|
| 48 |
<xs:element ref="hiv_positive_status"/> |
|
|
|
| 49 |
<xs:element ref="total_cells_submitted"/> |
|
|
|
| 50 |
<xs:element ref="percent_myeloblasts_for_submitted_specimen"/> |
|
|
|
| 51 |
</xs:sequence> |
|
|
|
| 52 |
</xs:complexType> |
|
|
|
| 53 |
</xs:element> |
|
|
|
| 54 |
<xs:element name="tumor_samples"> |
|
|
|
| 55 |
<xs:complexType> |
|
|
|
| 56 |
<xs:sequence> |
|
|
|
| 57 |
<xs:element ref="tumor_sample" minOccurs="0" maxOccurs="unbounded"/> |
|
|
|
| 58 |
</xs:sequence> |
|
|
|
| 59 |
</xs:complexType> |
|
|
|
| 60 |
</xs:element> |
|
|
|
| 61 |
<xs:element name="tumor_sample"> |
|
|
|
| 62 |
<xs:complexType> |
|
|
|
| 63 |
<xs:sequence> |
|
|
|
| 64 |
<xs:element ref="vial_number"/> |
|
|
|
| 65 |
<xs:element ref="bcr_sample_uuid"/> |
|
|
|
| 66 |
<xs:element ref="tumor_weight"/> |
|
|
|
| 67 |
<xs:element ref="tumor_nuclei_percent"/> |
|
|
|
| 68 |
<xs:element ref="tumor_necrosis_percent"/> |
|
|
|
| 69 |
<xs:element ref="tumor_pathology"/> |
|
|
|
| 70 |
</xs:sequence> |
|
|
|
| 71 |
</xs:complexType> |
|
|
|
| 72 |
</xs:element> |
|
|
|
| 73 |
<xs:element name="normal_controls"> |
|
|
|
| 74 |
<xs:complexType> |
|
|
|
| 75 |
<xs:sequence> |
|
|
|
| 76 |
<xs:element ref="normal_control" minOccurs="0" maxOccurs="unbounded"/> |
|
|
|
| 77 |
</xs:sequence> |
|
|
|
| 78 |
</xs:complexType> |
|
|
|
| 79 |
</xs:element> |
|
|
|
| 80 |
<xs:element name="normal_control"> |
|
|
|
| 81 |
<xs:complexType> |
|
|
|
| 82 |
<xs:sequence> |
|
|
|
| 83 |
<xs:element ref="vial_number"/> |
|
|
|
| 84 |
<xs:element ref="bcr_sample_uuid"/> |
|
|
|
| 85 |
<xs:element ref="normal_control_type"/> |
|
|
|
| 86 |
<xs:element ref="method_of_normal_sample_procurement"/> |
|
|
|
| 87 |
<xs:choice> |
|
|
|
| 88 |
<xs:sequence> |
|
|
|
| 89 |
<xs:element ref="day_of_normal_sample_procurement"/> |
|
|
|
| 90 |
<xs:element ref="month_of_normal_sample_procurement"/> |
|
|
|
| 91 |
<xs:element ref="year_of_normal_sample_procurement"/> |
|
|
|
| 92 |
</xs:sequence> |
|
|
|
| 93 |
<xs:element ref="days_to_normal_sample_procurement"/> |
|
|
|
| 94 |
</xs:choice> |
|
|
|
| 95 |
<xs:choice minOccurs="0" maxOccurs="1"> |
|
|
|
| 96 |
<xs:element ref="extracted_dna"/> |
|
|
|
| 97 |
<xs:element ref="normal_tissue"/> |
|
|
|
| 98 |
</xs:choice> |
|
|
|
| 99 |
</xs:sequence> |
|
|
|
| 100 |
</xs:complexType> |
|
|
|
| 101 |
</xs:element> |
|
|
|
| 102 |
<xs:element name="extracted_dna"> |
|
|
|
| 103 |
<xs:complexType> |
|
|
|
| 104 |
<xs:sequence> |
|
|
|
| 105 |
<xs:element ref="ncedna_dna_conc"/> |
|
|
|
| 106 |
<xs:element ref="ncedna_dna_qm"/> |
|
|
|
| 107 |
<xs:element ref="ncedna_dna_qty"/> |
|
|
|
| 108 |
<xs:element ref="ncedna_dna_vol"/> |
|
|
|
| 109 |
</xs:sequence> |
|
|
|
| 110 |
</xs:complexType> |
|
|
|
| 111 |
</xs:element> |
|
|
|
| 112 |
<xs:element name="normal_tissue"> |
|
|
|
| 113 |
<xs:complexType> |
|
|
|
| 114 |
<xs:sequence> |
|
|
|
| 115 |
<xs:element ref="normal_tissue_anatomic_site"/> |
|
|
|
| 116 |
<xs:element ref="normal_tissue_proximity"/> |
|
|
|
| 117 |
</xs:sequence> |
|
|
|
| 118 |
</xs:complexType> |
|
|
|
| 119 |
</xs:element> |
|
|
|
| 120 |
<xs:element name="vial_number" nillable="false"> |
|
|
|
| 121 |
<xs:complexType> |
|
|
|
| 122 |
<xs:simpleContent> |
|
|
|
| 123 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 124 |
<xs:length value="1"/> |
|
|
|
| 125 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 126 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4"/> |
|
|
|
| 127 |
</xs:restriction> |
|
|
|
| 128 |
</xs:simpleContent> |
|
|
|
| 129 |
</xs:complexType> |
|
|
|
| 130 |
</xs:element> |
|
|
|
| 131 |
<xs:element name="bcr_sample_uuid"> |
|
|
|
| 132 |
<xs:complexType> |
|
|
|
| 133 |
<xs:simpleContent> |
|
|
|
| 134 |
<xs:extension base="xs:string"> |
|
|
|
| 135 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 136 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 137 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 138 |
</xs:extension> |
|
|
|
| 139 |
</xs:simpleContent> |
|
|
|
| 140 |
</xs:complexType> |
|
|
|
| 141 |
</xs:element> |
|
|
|
| 142 |
<xs:element name="consent_or_death_status"> |
|
|
|
| 143 |
<xs:complexType> |
|
|
|
| 144 |
<xs:simpleContent> |
|
|
|
| 145 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 146 |
<xs:enumeration value=""/> |
|
|
|
| 147 |
<xs:enumeration value="Consented"/> |
|
|
|
| 148 |
<xs:enumeration value="Deceased"/> |
|
|
|
| 149 |
<xs:enumeration value="Exemption 4"/> |
|
|
|
| 150 |
<xs:enumeration value="Waiver"/> |
|
|
|
| 151 |
<xs:attribute name="cde" type="xs:string" default="3288361"/> |
|
|
|
| 152 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 153 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 154 |
</xs:restriction> |
|
|
|
| 155 |
</xs:simpleContent> |
|
|
|
| 156 |
</xs:complexType> |
|
|
|
| 157 |
</xs:element> |
|
|
|
| 158 |
<xs:element name="day_of_consent"> |
|
|
|
| 159 |
<xs:complexType mixed="true"> |
|
|
|
| 160 |
<xs:simpleContent> |
|
|
|
| 161 |
<xs:extension base="utility:generic_day"> |
|
|
|
| 162 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 163 |
<xs:attribute name="cde" type="xs:string" default="3081957"/> |
|
|
|
| 164 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 165 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 166 |
</xs:extension> |
|
|
|
| 167 |
</xs:simpleContent> |
|
|
|
| 168 |
</xs:complexType> |
|
|
|
| 169 |
</xs:element> |
|
|
|
| 170 |
<xs:element name="month_of_consent"> |
|
|
|
| 171 |
<xs:complexType mixed="true"> |
|
|
|
| 172 |
<xs:simpleContent> |
|
|
|
| 173 |
<xs:extension base="utility:generic_month"> |
|
|
|
| 174 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 175 |
<xs:attribute name="cde" type="xs:string" default="3081955"/> |
|
|
|
| 176 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 177 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 178 |
</xs:extension> |
|
|
|
| 179 |
</xs:simpleContent> |
|
|
|
| 180 |
</xs:complexType> |
|
|
|
| 181 |
</xs:element> |
|
|
|
| 182 |
<xs:element name="year_of_consent"> |
|
|
|
| 183 |
<xs:complexType mixed="true"> |
|
|
|
| 184 |
<xs:simpleContent> |
|
|
|
| 185 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 186 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 187 |
<xs:attribute name="cde" type="xs:string" default="3081959"/> |
|
|
|
| 188 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 189 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 190 |
</xs:extension> |
|
|
|
| 191 |
</xs:simpleContent> |
|
|
|
| 192 |
</xs:complexType> |
|
|
|
| 193 |
</xs:element> |
|
|
|
| 194 |
<xs:element name="days_to_consent"> |
|
|
|
| 195 |
<xs:complexType mixed="true"> |
|
|
|
| 196 |
<xs:simpleContent> |
|
|
|
| 197 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 198 |
<xs:attribute name="cde" type="xs:string" default="3288498"/> |
|
|
|
| 199 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 200 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 201 |
</xs:restriction> |
|
|
|
| 202 |
</xs:simpleContent> |
|
|
|
| 203 |
</xs:complexType> |
|
|
|
| 204 |
</xs:element> |
|
|
|
| |
| 206 |
<xs:element name="prior_head_radiation_therapy"> |
+- |
|
|
| 207 |
<xs:complexType> |
|
|
|
| 208 |
<xs:simpleContent> |
|
|
|
| 209 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 210 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 211 |
<xs:attribute name="cde" type="xs:string" default="3120926"/> |
|
|
|
| 212 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 213 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 214 |
</xs:extension> |
|
|
|
| 215 |
</xs:simpleContent> |
|
|
|
| 216 |
</xs:complexType> |
|
|
|
| 217 |
</xs:element> |
|
|
|
| |
| 219 |
<xs:element name="diagnosis_subtype"> |
+- |
|
|
| 220 |
<xs:complexType> |
|
|
|
| 221 |
<xs:simpleContent> |
|
|
|
| 222 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 223 |
<xs:enumeration value=""/> |
|
|
|
| 224 |
<xs:enumeration value="Non-papillary"/> |
|
|
|
| 225 |
<xs:enumeration value="Papillary"/> |
|
|
|
| 226 |
<xs:attribute name="cde" type="xs:string" default="2783887"/> |
|
|
|
| 227 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 228 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 229 |
</xs:restriction> |
|
|
|
| 230 |
</xs:simpleContent> |
|
|
|
| 231 |
</xs:complexType> |
|
|
|
| 232 |
</xs:element> |
|
|
|
| |
| 234 |
<xs:element name="history_of_neoadjuvant_treatment"> |
+- |
|
|
| 235 |
<xs:complexType> |
|
|
|
| 236 |
<xs:simpleContent> |
|
|
|
| 237 |
<xs:extension base="xs:string"> |
|
|
|
| 238 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 239 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 240 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 241 |
</xs:extension> |
|
|
|
| 242 |
</xs:simpleContent> |
|
|
|
| 243 |
</xs:complexType> |
|
|
|
| 244 |
</xs:element> |
|
|
|
| |
| 246 |
<xs:element name="history_of_prior_malignancy"> |
+- |
|
|
| 247 |
<xs:complexType> |
|
|
|
| 248 |
<xs:simpleContent> |
|
|
|
| 249 |
<xs:extension base="xs:string"> |
|
|
|
| 250 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 251 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 252 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 253 |
</xs:extension> |
|
|
|
| 254 |
</xs:simpleContent> |
|
|
|
| 255 |
</xs:complexType> |
|
|
|
| 256 |
</xs:element> |
|
|
|
| |
| 258 |
<xs:element name="normal_tissue_anatomic_site"> |
+- |
|
|
| 259 |
<xs:complexType> |
|
|
|
| 260 |
<xs:simpleContent> |
|
|
|
| 261 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 262 |
<xs:enumeration value=""/> |
|
|
|
| 263 |
<xs:enumeration value="BLADDER"/> |
|
|
|
| 264 |
<xs:enumeration value="BLOOD"/> |
|
|
|
| 265 |
<xs:enumeration value="BONE MARROW"/> |
|
|
|
| 266 |
<xs:enumeration value="BRAIN"/> |
|
|
|
| 267 |
<xs:enumeration value="BREAST"/> |
|
|
|
| 268 |
<xs:enumeration value="CENTRAL NERVOUS SYSTEM"/> |
|
|
|
| 269 |
<xs:enumeration value="CERVIX"/> |
|
|
|
| 270 |
<xs:enumeration value="COLON"/> |
|
|
|
| 271 |
<xs:enumeration value="ENDOMETRIAL"/> |
|
|
|
| 272 |
<xs:enumeration value="HEAD/NECK"/> |
|
|
|
| 273 |
<xs:enumeration value="KIDNEY"/> |
|
|
|
| 274 |
<xs:enumeration value="Liver"/> |
|
|
|
| 275 |
<xs:enumeration value="LUNG"/> |
|
|
|
| 276 |
<xs:enumeration value="LYMPH NODE"/> |
|
|
|
| 277 |
<xs:enumeration value="OMENTUM"/> |
|
|
|
| 278 |
<xs:enumeration value="OVARY"/> |
|
|
|
| 279 |
<xs:enumeration value="PERITONEUM (OVARY)"/> |
|
|
|
| 280 |
<xs:enumeration value="Prostate"/> |
|
|
|
| 281 |
<xs:enumeration value="RECTUM"/> |
|
|
|
| 282 |
<xs:enumeration value="STOMACH"/> |
|
|
|
| 283 |
<xs:enumeration value="Thyroid gland"/> |
|
|
|
| 284 |
<xs:enumeration value="Skin"/> |
|
|
|
| 285 |
<xs:enumeration value="Subcutaneous tissue"/> |
|
|
|
| 286 |
<xs:enumeration value="Lymph node(s) Regional"/> |
|
|
|
| 287 |
<xs:enumeration value="Lymph node(s) Distant"/> |
|
|
|
| 288 |
<xs:enumeration value="Other"/> |
|
|
|
| 289 |
<xs:attribute name="cde" type="xs:string" default="3081938"/> |
|
|
|
| 290 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 291 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 292 |
</xs:restriction> |
|
|
|
| 293 |
</xs:simpleContent> |
|
|
|
| 294 |
</xs:complexType> |
|
|
|
| 295 |
</xs:element> |
|
|
|
| 296 |
<xs:element name="normal_tissue_proximity"> |
|
|
|
| 297 |
<xs:complexType> |
|
|
|
| 298 |
<xs:simpleContent> |
|
|
|
| 299 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 300 |
<xs:enumeration value=""/> |
|
|
|
| 301 |
<xs:enumeration value="Distal (>2cm)"/> |
|
|
|
| 302 |
<xs:attribute name="cde" type="xs:string" default="3088708"/> |
|
|
|
| 303 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 304 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 305 |
</xs:restriction> |
|
|
|
| 306 |
</xs:simpleContent> |
|
|
|
| 307 |
</xs:complexType> |
|
|
|
| 308 |
</xs:element> |
|
|
|
| 309 |
<xs:element name="other_anatomic_site_normal_tissue" nillable="true"> |
|
|
|
| 310 |
<xs:complexType> |
|
|
|
| 311 |
<xs:simpleContent> |
|
|
|
| 312 |
<xs:extension base="xs:string"> |
|
|
|
| 313 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 314 |
<xs:attribute name="cde" type="xs:string" default="3288189"/> |
|
|
|
| 315 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 316 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 317 |
</xs:extension> |
|
|
|
| 318 |
</xs:simpleContent> |
|
|
|
| 319 |
</xs:complexType> |
|
|
|
| 320 |
</xs:element> |
|
|
|
| 321 |
<xs:element name="tumor_focality"> |
|
|
|
| 322 |
<xs:complexType> |
|
|
|
| 323 |
<xs:simpleContent> |
|
|
|
| 324 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 325 |
<xs:enumeration value=""/> |
|
|
|
| 326 |
<xs:enumeration value="Multifocal"/> |
|
|
|
| 327 |
<xs:enumeration value="Unifocal"/> |
|
|
|
| 328 |
<xs:attribute name="cde" type="xs:string" default="3174022"/> |
|
|
|
| 329 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 330 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 331 |
</xs:restriction> |
|
|
|
| 332 |
</xs:simpleContent> |
|
|
|
| 333 |
</xs:complexType> |
|
|
|
| 334 |
</xs:element> |
|
|
|
| 335 |
<xs:element name="tumor_type"> |
|
|
|
| 336 |
<xs:complexType> |
|
|
|
| 337 |
<xs:simpleContent> |
|
|
|
| 338 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 339 |
<xs:enumeration value=""/> |
|
|
|
| 340 |
<xs:enumeration value="Metastatic"/> |
|
|
|
| 341 |
<xs:enumeration value="Recurrent"/> |
|
|
|
| 342 |
<xs:enumeration value="Primary"/> |
|
|
|
| 343 |
<xs:enumeration value="Tumor specimen from de novo untreated malignancy of the bladder"/> |
|
|
|
| 344 |
<xs:attribute name="cde" type="xs:string" default="3288124"/> |
|
|
|
| 345 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 346 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 347 |
</xs:restriction> |
|
|
|
| 348 |
</xs:simpleContent> |
|
|
|
| 349 |
</xs:complexType> |
|
|
|
| 350 |
</xs:element> |
|
|
|
| 351 |
<xs:element name="other_diagnosis" nillable="true"> |
|
|
|
| 352 |
<xs:complexType> |
|
|
|
| 353 |
<xs:simpleContent> |
|
|
|
| 354 |
<xs:extension base="xs:string"> |
|
|
|
| 355 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 356 |
<xs:attribute name="cde" type="xs:string" default="3124492"/> |
|
|
|
| 357 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 358 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 359 |
</xs:extension> |
|
|
|
| 360 |
</xs:simpleContent> |
|
|
|
| 361 |
</xs:complexType> |
|
|
|
| 362 |
</xs:element> |
|
|
|
| 363 |
<xs:element name="aml_world_health_organization"> |
|
|
|
| 364 |
<xs:complexType> |
|
|
|
| 365 |
<xs:simpleContent> |
|
|
|
| 366 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 367 |
<xs:enumeration value=""/> |
|
|
|
| 368 |
<xs:enumeration value="Acute basophilic leukemia"/> |
|
|
|
| 369 |
<xs:enumeration value="Acute erythroid leukemia"/> |
|
|
|
| 370 |
<xs:enumeration value="Acute megakaryoblastic leukemia"/> |
|
|
|
| 371 |
<xs:enumeration value="Acute monoblastic/monocytic leukemia"/> |
|
|
|
| 372 |
<xs:enumeration value="Acute myelomonocytic leukemia"/> |
|
|
|
| 373 |
<xs:enumeration value="Acute panmyelosis with myelofibrosis"/> |
|
|
|
| 374 |
<xs:enumeration value="AML (megakaryoblastic) with t(1;22) (p13;q13); RBM15-MKL1"/> |
|
|
|
| 375 |
<xs:enumeration value="AML with inv(16)(p13q22) or t(16;16) (p13.1;q22), (CBFß/MYH11)"/> |
|
|
|
| 376 |
<xs:enumeration value="AML with inv(3)(q21;q26.2) or t(3;3) (q21;q26.2);RPNI-EVI1"/> |
|
|
|
| 377 |
<xs:enumeration value="AML with maturation"/> |
|
|
|
| 378 |
<xs:enumeration value="AML with minimal differentiation"/> |
|
|
|
| 379 |
<xs:enumeration value="AML with mutated CEBPA"/> |
|
|
|
| 380 |
<xs:enumeration value="AML with mutated NPM1"/> |
|
|
|
| 381 |
<xs:enumeration value="AML with myelodysplasia-related changes"/> |
|
|
|
| 382 |
<xs:enumeration value="AML with t(6;9)(p23;q34);DEK-NUP214"/> |
|
|
|
| 383 |
<xs:enumeration value="AML with t(8;21)(q22;q22), RUNX1 RUNX1T1"/> |
|
|
|
| 384 |
<xs:enumeration value="AML with t(9;11)(p22;q33);MLLT3-MLL"/> |
|
|
|
| 385 |
<xs:enumeration value="AML without maturation"/> |
|
|
|
| 386 |
<xs:enumeration value="Classified by FAB Only"/> |
|
|
|
| 387 |
<xs:enumeration value="Erythroleukemia, erythroid/myeloid"/> |
|
|
|
| 388 |
<xs:attribute name="cde" type="xs:string" default="3257714"/> |
|
|
|
| 389 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 390 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 391 |
</xs:restriction> |
|
|
|
| 392 |
</xs:simpleContent> |
|
|
|
| 393 |
</xs:complexType> |
|
|
|
| 394 |
</xs:element> |
|
|
|
| 395 |
<xs:element name="fab_category"> |
|
|
|
| 396 |
<xs:complexType> |
|
|
|
| 397 |
<xs:simpleContent> |
|
|
|
| 398 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 399 |
<xs:enumeration value=""/> |
|
|
|
| 400 |
<xs:enumeration value="Biphenotypic"/> |
|
|
|
| 401 |
<xs:enumeration value="M0 Undifferentiated"/> |
|
|
|
| 402 |
<xs:enumeration value="M1"/> |
|
|
|
| 403 |
<xs:enumeration value="M2"/> |
|
|
|
| 404 |
<xs:enumeration value="M3"/> |
|
|
|
| 405 |
<xs:enumeration value="M3v"/> |
|
|
|
| 406 |
<xs:enumeration value="M4"/> |
|
|
|
| 407 |
<xs:enumeration value="M4EOS"/> |
|
|
|
| 408 |
<xs:enumeration value="M5"/> |
|
|
|
| 409 |
<xs:enumeration value="M6"/> |
|
|
|
| 410 |
<xs:enumeration value="M7"/> |
|
|
|
| 411 |
<xs:enumeration value="Not classified"/> |
|
|
|
| 412 |
<xs:enumeration value="Not Classified"/> |
|
|
|
| 413 |
<xs:enumeration value="Not Classified"/> |
|
|
|
| 414 |
<xs:attribute name="cde" type="xs:string" default="3124352"/> |
|
|
|
| 415 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 416 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 417 |
</xs:restriction> |
|
|
|
| 418 |
</xs:simpleContent> |
|
|
|
| 419 |
</xs:complexType> |
|
|
|
| 420 |
</xs:element> |
|
|
|
| 421 |
<xs:element name="diagnosis_cytogenetic_analysis"> |
|
|
|
| 422 |
<xs:complexType> |
|
|
|
| 423 |
<xs:simpleContent> |
|
|
|
| 424 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 425 |
<xs:enumeration value=""/> |
|
|
|
| 426 |
<xs:enumeration value="TDT Negative"/> |
|
|
|
| 427 |
<xs:enumeration value="NSE Positive"/> |
|
|
|
| 428 |
<xs:enumeration value="NSE Not Tested"/> |
|
|
|
| 429 |
<xs:enumeration value="NSE Negative"/> |
|
|
|
| 430 |
<xs:enumeration value="MPX Not Tested"/> |
|
|
|
| 431 |
<xs:enumeration value="MPX Positive"/> |
|
|
|
| 432 |
<xs:enumeration value="MPX Negative"/> |
|
|
|
| 433 |
<xs:enumeration value="NA Not Tested"/> |
|
|
|
| 434 |
<xs:enumeration value="NA Positive"/> |
|
|
|
| 435 |
<xs:enumeration value="NA Negative"/> |
|
|
|
| 436 |
<xs:enumeration value="CD56 Not Tested"/> |
|
|
|
| 437 |
<xs:enumeration value="CD56 Positive"/> |
|
|
|
| 438 |
<xs:enumeration value="CD56 Negative"/> |
|
|
|
| 439 |
<xs:enumeration value="CD45 Not Tested"/> |
|
|
|
| 440 |
<xs:enumeration value="CD45 Positive"/> |
|
|
|
| 441 |
<xs:enumeration value="CD45 Negative"/> |
|
|
|
| 442 |
<xs:enumeration value="CD34 Not Tested"/> |
|
|
|
| 443 |
<xs:enumeration value="CD34 Positive"/> |
|
|
|
| 444 |
<xs:enumeration value="CD34 Negative"/> |
|
|
|
| 445 |
<xs:enumeration value="CD33 Not Tested"/> |
|
|
|
| 446 |
<xs:enumeration value="CD33 Positive"/> |
|
|
|
| 447 |
<xs:enumeration value="CD33 Negative"/> |
|
|
|
| 448 |
<xs:enumeration value="CD25 Not Tested"/> |
|
|
|
| 449 |
<xs:enumeration value="CD25 Positive"/> |
|
|
|
| 450 |
<xs:enumeration value="CD25 Negative"/> |
|
|
|
| 451 |
<xs:enumeration value="CD23 Not Tested"/> |
|
|
|
| 452 |
<xs:enumeration value="CD23 Positive"/> |
|
|
|
| 453 |
<xs:enumeration value="CD23 Negative"/> |
|
|
|
| 454 |
<xs:enumeration value="CD20 Not Tested"/> |
|
|
|
| 455 |
<xs:enumeration value="CD20 Positive"/> |
|
|
|
| 456 |
<xs:enumeration value="CD20 Negative"/> |
|
|
|
| 457 |
<xs:enumeration value="CD19 Not Tested"/> |
|
|
|
| 458 |
<xs:enumeration value="CD19 Positive"/> |
|
|
|
| 459 |
<xs:enumeration value="CD19 Negative"/> |
|
|
|
| 460 |
<xs:enumeration value="CD15 Not Tested"/> |
|
|
|
| 461 |
<xs:enumeration value="CD15 Positive"/> |
|
|
|
| 462 |
<xs:enumeration value="CD15 Negative"/> |
|
|
|
| 463 |
<xs:enumeration value="CD14 Not Tested"/> |
|
|
|
| 464 |
<xs:enumeration value="CD14 Positive"/> |
|
|
|
| 465 |
<xs:enumeration value="CD14 Negative"/> |
|
|
|
| 466 |
<xs:enumeration value="CD10 Not Tested"/> |
|
|
|
| 467 |
<xs:enumeration value="CD10 Positive"/> |
|
|
|
| 468 |
<xs:enumeration value="CD10 Negative"/> |
|
|
|
| 469 |
<xs:enumeration value="CD7 Not Tested"/> |
|
|
|
| 470 |
<xs:enumeration value="CD7 Positive"/> |
|
|
|
| 471 |
<xs:enumeration value="CD7 Negative"/> |
|
|
|
| 472 |
<xs:enumeration value="CD5 Not Tested"/> |
|
|
|
| 473 |
<xs:enumeration value="CD5 Positive"/> |
|
|
|
| 474 |
<xs:enumeration value="CD5 Negative"/> |
|
|
|
| 475 |
<xs:enumeration value="CD3 Not Tested"/> |
|
|
|
| 476 |
<xs:enumeration value="CD3 Positive"/> |
|
|
|
| 477 |
<xs:enumeration value="CD3 Negative"/> |
|
|
|
| 478 |
<xs:enumeration value="TDT Not Tested"/> |
|
|
|
| 479 |
<xs:enumeration value="TDT Positive"/> |
|
|
|
| 480 |
<xs:enumeration value="Other CD Not Tested"/> |
|
|
|
| 481 |
<xs:enumeration value="Other CD Positive"/> |
|
|
|
| 482 |
<xs:enumeration value="Other CD Negative"/> |
|
|
|
| 483 |
<xs:enumeration value="HLA-DR Not Tested"/> |
|
|
|
| 484 |
<xs:enumeration value="HLA-DR Positive"/> |
|
|
|
| 485 |
<xs:enumeration value="HLA-DR Negative"/> |
|
|
|
| 486 |
<xs:enumeration value="CD 117 Not Tested"/> |
|
|
|
| 487 |
<xs:enumeration value="CD117 Positive"/> |
|
|
|
| 488 |
<xs:enumeration value="CD117 Negative"/> |
|
|
|
| 489 |
<xs:enumeration value="CD13 Not Tested"/> |
|
|
|
| 490 |
<xs:enumeration value="CD13 Positive"/> |
|
|
|
| 491 |
<xs:enumeration value="CD13 Negative"/> |
|
|
|
| 492 |
<xs:attribute name="cde" type="xs:string" default="3121483"/> |
|
|
|
| 493 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 494 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 495 |
</xs:restriction> |
|
|
|
| 496 |
</xs:simpleContent> |
|
|
|
| 497 |
</xs:complexType> |
|
|
|
| 498 |
</xs:element> |
|
|
|
| 499 |
<xs:element name="histological_subtype"> |
|
|
|
| 500 |
<xs:complexType> |
|
|
|
| 501 |
<xs:simpleContent> |
|
|
|
| 502 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 503 |
<xs:enumeration value=""/> |
|
|
|
| 504 |
<xs:attribute name="cde" type="xs:string" default="3081934"/> |
|
|
|
| 505 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 506 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 507 |
</xs:restriction> |
|
|
|
| 508 |
</xs:simpleContent> |
|
|
|
| 509 |
</xs:complexType> |
|
|
|
| 510 |
</xs:element> |
|
|
|
| 511 |
<xs:element name="nodal_anatomic_site"> |
|
|
|
| 512 |
<xs:complexType> |
|
|
|
| 513 |
<xs:simpleContent> |
|
|
|
| 514 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 515 |
<xs:enumeration value=""/> |
|
|
|
| 516 |
<xs:attribute name="cde" type="xs:string" default="2180591"/> |
|
|
|
| 517 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 518 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 519 |
</xs:restriction> |
|
|
|
| 520 |
</xs:simpleContent> |
|
|
|
| 521 |
</xs:complexType> |
|
|
|
| 522 |
</xs:element> |
|
|
|
| 523 |
<xs:element name="extranodal_anatomic_site"> |
|
|
|
| 524 |
<xs:complexType> |
|
|
|
| 525 |
<xs:simpleContent> |
|
|
|
| 526 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 527 |
<xs:enumeration value=""/> |
|
|
|
| 528 |
<xs:attribute name="cde" type="xs:string" default="3153874"/> |
|
|
|
| 529 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 530 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 531 |
</xs:restriction> |
|
|
|
| 532 |
</xs:simpleContent> |
|
|
|
| 533 |
</xs:complexType> |
|
|
|
| 534 |
</xs:element> |
|
|
|
| |
| 536 |
<xs:element name="frozen_specimen_anatomic_site" nillable="true"> |
+- |
|
|
| 537 |
<xs:complexType> |
|
|
|
| 538 |
<xs:simpleContent> |
|
|
|
| 539 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 540 |
<xs:enumeration value="" /> |
|
|
|
| 541 |
<xs:enumeration value="Cecum" /> |
|
|
|
| 542 |
<xs:enumeration value="Ascending Colon" /> |
|
|
|
| 543 |
<xs:enumeration value="Hepatic Flexure" /> |
|
|
|
| 544 |
<xs:enumeration value="Transverse Colon" /> |
|
|
|
| 545 |
<xs:enumeration value="Splenic Flexure" /> |
|
|
|
| 546 |
<xs:enumeration value="Descending Colon" /> |
|
|
|
| 547 |
<xs:enumeration value="Sigmoid Colon" /> |
|
|
|
| 548 |
<xs:enumeration value="Oral Cavity" /> |
|
|
|
| 549 |
<xs:enumeration value="Lip" /> |
|
|
|
| 550 |
<xs:enumeration value="Tongue" /> |
|
|
|
| 551 |
<xs:enumeration value="Alveolar Ridge" /> |
|
|
|
| 552 |
<xs:enumeration value="Floor of Mouth" /> |
|
|
|
| 553 |
<xs:enumeration value="Hard Palate" /> |
|
|
|
| 554 |
<xs:enumeration value="Buccal Mucosa" /> |
|
|
|
| 555 |
<xs:enumeration value="Oropharynx" /> |
|
|
|
| 556 |
<xs:enumeration value="Tonsil" /> |
|
|
|
| 557 |
<xs:enumeration value="Base of Tongue" /> |
|
|
|
| 558 |
<xs:enumeration value="Hypopharynx" /> |
|
|
|
| 559 |
<xs:enumeration value="Larynx" /> |
|
|
|
| 560 |
<xs:enumeration value="Supratentorial" /> |
|
|
|
| 561 |
<xs:enumeration value="Spinal Cord" /> |
|
|
|
| 562 |
<xs:enumeration value="Posterior Fossa" /> |
|
|
|
| 563 |
<xs:enumeration value="Location Not Specified" /> |
|
|
|
| 564 |
<xs:enumeration value="Prostate" /> |
|
|
|
| 565 |
<xs:enumeration value="Seminal Vesicle" /> |
|
|
|
| 566 |
<xs:enumeration value="Rectosigmoid Junction" /> |
|
|
|
| 567 |
<xs:enumeration value="Rectum" /> |
|
|
|
| 568 |
<xs:enumeration value="Gastroesophageal Junction" /> |
|
|
|
| 569 |
<xs:enumeration value="Cardia/Proximal" /> |
|
|
|
| 570 |
<xs:enumeration value="Fundus/Body" /> |
|
|
|
| 571 |
<xs:enumeration value="Antrum/Distal" /> |
|
|
|
| 572 |
<xs:attribute name="cde" type="xs:string" default="3081961" /> |
|
|
|
| 573 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 574 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 575 |
</xs:restriction> |
|
|
|
| 576 |
</xs:simpleContent> |
|
|
|
| 577 |
</xs:complexType> |
|
|
|
| 578 |
</xs:element> |
|
|
|
| |
| 580 |
<xs:element name="other_anatomic_site" nillable="true"> |
+- |
|
|
| 581 |
<xs:complexType> |
|
|
|
| 582 |
<xs:simpleContent> |
|
|
|
| 583 |
<xs:extension base="xs:string"> |
|
|
|
| 584 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 585 |
<xs:attribute name="cde" type="xs:string" default="3320289"/> |
|
|
|
| 586 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 587 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 588 |
</xs:extension> |
|
|
|
| 589 |
</xs:simpleContent> |
|
|
|
| 590 |
</xs:complexType> |
|
|
|
| 591 |
</xs:element> |
|
|
|
| 592 |
<xs:element name="country" nillable="true"> |
|
|
|
| 593 |
<xs:complexType> |
|
|
|
| 594 |
<xs:simpleContent> |
|
|
|
| 595 |
<xs:extension base="xs:string"> |
|
|
|
| 596 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 597 |
<xs:attribute name="cde" type="xs:string" default="3203072"/> |
|
|
|
| 598 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 599 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 600 |
</xs:extension> |
|
|
|
| 601 |
</xs:simpleContent> |
|
|
|
| 602 |
</xs:complexType> |
|
|
|
| 603 |
</xs:element> |
|
|
|
| 604 |
<xs:element name="digital_image_submitted"> |
|
|
|
| 605 |
<xs:complexType> |
|
|
|
| 606 |
<xs:simpleContent> |
|
|
|
| 607 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 608 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 609 |
<xs:attribute name="cde" type="xs:string" default="3081948"/> |
|
|
|
| 610 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 611 |
</xs:extension> |
|
|
|
| 612 |
</xs:simpleContent> |
|
|
|
| 613 |
</xs:complexType> |
|
|
|
| 614 |
</xs:element> |
|
|
|
| 615 |
<xs:element name="pcr_amplification_successful"> |
|
|
|
| 616 |
<xs:complexType mixed="true"> |
|
|
|
| 617 |
<xs:simpleContent> |
|
|
|
| 618 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 619 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 620 |
</xs:restriction> |
|
|
|
| 621 |
</xs:simpleContent> |
|
|
|
| 622 |
</xs:complexType> |
|
|
|
| 623 |
</xs:element> |
|
|
|
| 624 |
<xs:element name="ncedna_dna_qm" default="" nillable="true"> |
|
|
|
| 625 |
<xs:complexType mixed="true"> |
|
|
|
| 626 |
<xs:simpleContent> |
|
|
|
| 627 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 628 |
<xs:attribute name="cde" type="xs:string" default="3288186"/> |
|
|
|
| 629 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 630 |
</xs:restriction> |
|
|
|
| 631 |
</xs:simpleContent> |
|
|
|
| 632 |
</xs:complexType> |
|
|
|
| 633 |
</xs:element> |
|
|
|
| 634 |
<xs:element name="ncedna_dna_qty" default="" nillable="true"> |
|
|
|
| 635 |
<xs:complexType mixed="true"> |
|
|
|
| 636 |
<xs:simpleContent> |
|
|
|
| 637 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 638 |
<xs:attribute name="cde" type="xs:string" default="3288185"/> |
|
|
|
| 639 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 640 |
</xs:restriction> |
|
|
|
| 641 |
</xs:simpleContent> |
|
|
|
| 642 |
</xs:complexType> |
|
|
|
| 643 |
</xs:element> |
|
|
|
| 644 |
<xs:element name="ncedna_dna_conc" default="" nillable="true"> |
|
|
|
| 645 |
<xs:complexType mixed="true"> |
|
|
|
| 646 |
<xs:simpleContent> |
|
|
|
| 647 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 648 |
<xs:attribute name="cde" type="xs:string" default="3288187"/> |
|
|
|
| 649 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 650 |
</xs:restriction> |
|
|
|
| 651 |
</xs:simpleContent> |
|
|
|
| 652 |
</xs:complexType> |
|
|
|
| 653 |
</xs:element> |
|
|
|
| 654 |
<xs:element name="ncedna_dna_vol" default="" nillable="true"> |
|
|
|
| 655 |
<xs:complexType mixed="true"> |
|
|
|
| 656 |
<xs:simpleContent> |
|
|
|
| 657 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 658 |
<xs:attribute name="cde" type="xs:string" default="3288188"/> |
|
|
|
| 659 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 660 |
</xs:restriction> |
|
|
|
| 661 |
</xs:simpleContent> |
|
|
|
| 662 |
</xs:complexType> |
|
|
|
| 663 |
</xs:element> |
|
|
|
| 664 |
<xs:element name="tumor_necrosis_percent" nillable="true"> |
|
|
|
| 665 |
<xs:complexType mixed="true"> |
|
|
|
| 666 |
<xs:simpleContent> |
|
|
|
| 667 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 668 |
<xs:attribute name="cde" type="xs:string" default="2841237"/> |
|
|
|
| 669 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 670 |
</xs:restriction> |
|
|
|
| 671 |
</xs:simpleContent> |
|
|
|
| 672 |
</xs:complexType> |
|
|
|
| 673 |
</xs:element> |
|
|
|
| 674 |
<xs:element name="normal_control_type" nillable="true"> |
|
|
|
| 675 |
<xs:complexType mixed="true"> |
|
|
|
| 676 |
<xs:simpleContent> |
|
|
|
| 677 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 678 |
<xs:attribute name="cde" type="xs:string" default="3081936"/> |
|
|
|
| 679 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 680 |
</xs:restriction> |
|
|
|
| 681 |
</xs:simpleContent> |
|
|
|
| 682 |
</xs:complexType> |
|
|
|
| 683 |
</xs:element> |
|
|
|
| 684 |
<xs:element name="other_vessel_used" default="" nillable="true"> |
|
|
|
| 685 |
<xs:complexType mixed="true"> |
|
|
|
| 686 |
<xs:simpleContent> |
|
|
|
| 687 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 688 |
<xs:attribute name="cde" type="xs:string" default="3288137"/> |
|
|
|
| 689 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 690 |
</xs:restriction> |
|
|
|
| 691 |
</xs:simpleContent> |
|
|
|
| 692 |
</xs:complexType> |
|
|
|
| 693 |
</xs:element> |
|
|
|
| 694 |
<xs:element name="path_confirm_report_attached" default="" nillable="true"> |
|
|
|
| 695 |
<xs:complexType> |
|
|
|
| 696 |
<xs:simpleContent> |
|
|
|
| 697 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 698 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 699 |
<xs:attribute name="cde" type="xs:string" default="3288292"/> |
|
|
|
| 700 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 701 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 702 |
</xs:extension> |
|
|
|
| 703 |
</xs:simpleContent> |
|
|
|
| 704 |
</xs:complexType> |
|
|
|
| 705 |
</xs:element> |
|
|
|
| 706 |
<xs:element name="path_confirm_tumor_necrosis_metrics" nillable="true"> |
|
|
|
| 707 |
<xs:complexType> |
|
|
|
| 708 |
<xs:simpleContent> |
|
|
|
| 709 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 710 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 711 |
<xs:attribute name="cde" type="xs:string" default="3288524"/> |
|
|
|
| 712 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 713 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 714 |
</xs:extension> |
|
|
|
| 715 |
</xs:simpleContent> |
|
|
|
| 716 |
</xs:complexType> |
|
|
|
| 717 |
</xs:element> |
|
|
|
| 718 |
<xs:element name="path_confirm_tumor_nuclei_metrics" nillable="true"> |
|
|
|
| 719 |
<xs:complexType> |
|
|
|
| 720 |
<xs:simpleContent> |
|
|
|
| 721 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 722 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 723 |
<xs:attribute name="cde" type="xs:string" default="3288520"/> |
|
|
|
| 724 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 725 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 726 |
</xs:extension> |
|
|
|
| 727 |
</xs:simpleContent> |
|
|
|
| 728 |
</xs:complexType> |
|
|
|
| 729 |
</xs:element> |
|
|
|
| 730 |
<xs:element name="sample_prescreened" default="" nillable="true"> |
|
|
|
| 731 |
<xs:complexType mixed="true"> |
|
|
|
| 732 |
<xs:simpleContent> |
|
|
|
| 733 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 734 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 735 |
<xs:attribute name="cde" type="xs:string" default="3081942"/> |
|
|
|
| 736 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 737 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 738 |
</xs:extension> |
|
|
|
| 739 |
</xs:simpleContent> |
|
|
|
| 740 |
</xs:complexType> |
|
|
|
| 741 |
</xs:element> |
|
|
|
| 742 |
<xs:element name="top_slide_submitted" default="" nillable="true"> |
|
|
|
| 743 |
<xs:complexType> |
|
|
|
| 744 |
<xs:simpleContent> |
|
|
|
| 745 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 746 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 747 |
<xs:attribute name="cde" type="xs:string" default="3081948"/> |
|
|
|
| 748 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 749 |
</xs:extension> |
|
|
|
| 750 |
</xs:simpleContent> |
|
|
|
| 751 |
</xs:complexType> |
|
|
|
| 752 |
</xs:element> |
|
|
|
| 753 |
<xs:element name="tumor_nuclei_percent" default="" nillable="true"> |
|
|
|
| 754 |
<xs:complexType mixed="true"> |
|
|
|
| 755 |
<xs:simpleContent> |
|
|
|
| 756 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 757 |
<xs:attribute name="cde" type="xs:string" default="2841225"/> |
|
|
|
| 758 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 759 |
</xs:restriction> |
|
|
|
| 760 |
</xs:simpleContent> |
|
|
|
| 761 |
</xs:complexType> |
|
|
|
| 762 |
</xs:element> |
|
|
|
| 763 |
<xs:element name="vessel_used" default="" nillable="true"> |
|
|
|
| 764 |
<xs:complexType mixed="true"> |
|
|
|
| 765 |
<xs:simpleContent> |
|
|
|
| 766 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 767 |
<xs:attribute name="cde" type="xs:string" default="3081940"/> |
|
|
|
| 768 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 769 |
</xs:restriction> |
|
|
|
| 770 |
</xs:simpleContent> |
|
|
|
| 771 |
</xs:complexType> |
|
|
|
| 772 |
</xs:element> |
|
|
|
| 773 |
<xs:element name="method_of_normal_sample_procurement" default="" nillable="true"> |
|
|
|
| 774 |
<xs:complexType mixed="true"> |
|
|
|
| 775 |
<xs:simpleContent> |
|
|
|
| 776 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 777 |
<xs:attribute name="cde" type="xs:string" default="3288147"/> |
|
|
|
| 778 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 779 |
</xs:restriction> |
|
|
|
| 780 |
</xs:simpleContent> |
|
|
|
| 781 |
</xs:complexType> |
|
|
|
| 782 |
</xs:element> |
|
|
|
| 783 |
<xs:element name="tumor_weight" default="" nillable="true"> |
|
|
|
| 784 |
<xs:complexType mixed="true"> |
|
|
|
| 785 |
<xs:simpleContent> |
|
|
|
| 786 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 787 |
<xs:attribute name="cde" type="xs:string" default="3081946"/> |
|
|
|
| 788 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 789 |
</xs:restriction> |
|
|
|
| 790 |
</xs:simpleContent> |
|
|
|
| 791 |
</xs:complexType> |
|
|
|
| 792 |
</xs:element> |
|
|
|
| 793 |
<xs:element name="year_of_cancer_sample_procurement" default="" nillable="true"> |
|
|
|
| 794 |
<xs:complexType mixed="true"> |
|
|
|
| 795 |
<xs:simpleContent> |
|
|
|
| 796 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 797 |
<xs:attribute name="cde" type="xs:string" default="3008199"/> |
|
|
|
| 798 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 799 |
</xs:restriction> |
|
|
|
| 800 |
</xs:simpleContent> |
|
|
|
| 801 |
</xs:complexType> |
|
|
|
| 802 |
</xs:element> |
|
|
|
| 803 |
<xs:element name="sample_type_of_frozen_biospecimen_submitted" default="" nillable="true"> |
|
|
|
| 804 |
<xs:complexType mixed="true"> |
|
|
|
| 805 |
<xs:simpleContent> |
|
|
|
| 806 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 807 |
<xs:attribute name="cde" type="xs:string" default="3220470"/> |
|
|
|
| 808 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 809 |
</xs:restriction> |
|
|
|
| 810 |
</xs:simpleContent> |
|
|
|
| 811 |
</xs:complexType> |
|
|
|
| 812 |
</xs:element> |
|
|
|
| 813 |
<xs:element name="total_cells_submitted" default="" nillable="true"> |
|
|
|
| 814 |
<xs:complexType mixed="true"> |
|
|
|
| 815 |
<xs:simpleContent> |
|
|
|
| 816 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 817 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 818 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 819 |
</xs:restriction> |
|
|
|
| 820 |
</xs:simpleContent> |
|
|
|
| 821 |
</xs:complexType> |
|
|
|
| 822 |
</xs:element> |
|
|
|
| 823 |
<xs:element name="percent_myeloblasts_for_submitted_specimen" default="" nillable="true"> |
|
|
|
| 824 |
<xs:complexType mixed="true"> |
|
|
|
| 825 |
<xs:simpleContent> |
|
|
|
| 826 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 827 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 828 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 829 |
</xs:restriction> |
|
|
|
| 830 |
</xs:simpleContent> |
|
|
|
| 831 |
</xs:complexType> |
|
|
|
| 832 |
</xs:element> |
|
|
|
| 833 |
<xs:element name="cytogenetic_report_submitted" nillable="true"> |
|
|
|
| 834 |
<xs:complexType> |
|
|
|
| 835 |
<xs:simpleContent> |
|
|
|
| 836 |
<xs:extension base="xs:string"> |
|
|
|
| 837 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 838 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 839 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 840 |
</xs:extension> |
|
|
|
| 841 |
</xs:simpleContent> |
|
|
|
| 842 |
</xs:complexType> |
|
|
|
| 843 |
</xs:element> |
|
|
|
| 844 |
<xs:element name="other_method_of_normal_sample_procurement" default="" nillable="true"> |
|
|
|
| 845 |
<xs:complexType mixed="true"> |
|
|
|
| 846 |
<xs:simpleContent> |
|
|
|
| 847 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 848 |
<xs:attribute name="cde" type="xs:string" default="2006730"/> |
|
|
|
| 849 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 850 |
</xs:restriction> |
|
|
|
| 851 |
</xs:simpleContent> |
|
|
|
| 852 |
</xs:complexType> |
|
|
|
| 853 |
</xs:element> |
|
|
|
| 854 |
<xs:element name="path_confirm_diagnosis_matching" default="" nillable="true"> |
|
|
|
| 855 |
<xs:complexType> |
|
|
|
| 856 |
<xs:simpleContent> |
|
|
|
| 857 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 858 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 859 |
<xs:attribute name="cde" type="xs:string" default="3288300"/> |
|
|
|
| 860 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 861 |
</xs:extension> |
|
|
|
| 862 |
</xs:simpleContent> |
|
|
|
| 863 |
</xs:complexType> |
|
|
|
| 864 |
</xs:element> |
|
|
|
| 865 |
<xs:element name="day_of_sample_procurement" default=""> |
|
|
|
| 866 |
<xs:complexType mixed="true"> |
|
|
|
| 867 |
<xs:simpleContent> |
|
|
|
| 868 |
<xs:extension base="utility:generic_day"> |
|
|
|
| 869 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 870 |
<xs:attribute name="cde" type="xs:string" default="3008195"/> |
|
|
|
| 871 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 872 |
</xs:extension> |
|
|
|
| 873 |
</xs:simpleContent> |
|
|
|
| 874 |
</xs:complexType> |
|
|
|
| 875 |
</xs:element> |
|
|
|
| 876 |
<xs:element name="month_of_sample_procurement" default=""> |
|
|
|
| 877 |
<xs:complexType mixed="true"> |
|
|
|
| 878 |
<xs:simpleContent> |
|
|
|
| 879 |
<xs:extension base="utility:generic_month"> |
|
|
|
| 880 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 881 |
<xs:attribute name="cde" type="xs:string" default="3008197"/> |
|
|
|
| 882 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 883 |
</xs:extension> |
|
|
|
| 884 |
</xs:simpleContent> |
|
|
|
| 885 |
</xs:complexType> |
|
|
|
| 886 |
</xs:element> |
|
|
|
| 887 |
<xs:element name="year_of_sample_procurement" default=""> |
|
|
|
| 888 |
<xs:complexType mixed="true"> |
|
|
|
| 889 |
<xs:simpleContent> |
|
|
|
| 890 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 891 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 892 |
<xs:attribute name="cde" type="xs:string" default="3008199"/> |
|
|
|
| 893 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 894 |
</xs:extension> |
|
|
|
| 895 |
</xs:simpleContent> |
|
|
|
| 896 |
</xs:complexType> |
|
|
|
| 897 |
</xs:element> |
|
|
|
| 898 |
<xs:element name="day_of_pathology_review" default=""> |
|
|
|
| 899 |
<xs:complexType mixed="true"> |
|
|
|
| 900 |
<xs:simpleContent> |
|
|
|
| 901 |
<xs:extension base="utility:generic_day"> |
|
|
|
| 902 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 903 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 904 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 905 |
</xs:extension> |
|
|
|
| 906 |
</xs:simpleContent> |
|
|
|
| 907 |
</xs:complexType> |
|
|
|
| 908 |
</xs:element> |
|
|
|
| 909 |
<xs:element name="month_of_pathology_review" default=""> |
|
|
|
| 910 |
<xs:complexType mixed="true"> |
|
|
|
| 911 |
<xs:simpleContent> |
|
|
|
| 912 |
<xs:extension base="utility:generic_month"> |
|
|
|
| 913 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 914 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 915 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 916 |
</xs:extension> |
|
|
|
| 917 |
</xs:simpleContent> |
|
|
|
| 918 |
</xs:complexType> |
|
|
|
| 919 |
</xs:element> |
|
|
|
| 920 |
<xs:element name="year_of_pathology_review" default=""> |
|
|
|
| 921 |
<xs:complexType mixed="true"> |
|
|
|
| 922 |
<xs:simpleContent> |
|
|
|
| 923 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 924 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 925 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 926 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 927 |
</xs:extension> |
|
|
|
| 928 |
</xs:simpleContent> |
|
|
|
| 929 |
</xs:complexType> |
|
|
|
| 930 |
</xs:element> |
|
|
|
| 931 |
<xs:element name="day_of_normal_sample_procurement" default=""> |
|
|
|
| 932 |
<xs:complexType mixed="true"> |
|
|
|
| 933 |
<xs:simpleContent> |
|
|
|
| 934 |
<xs:extension base="utility:generic_day"> |
|
|
|
| 935 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 936 |
<xs:attribute name="cde" type="xs:string" default="3288196"/> |
|
|
|
| 937 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 938 |
</xs:extension> |
|
|
|
| 939 |
</xs:simpleContent> |
|
|
|
| 940 |
</xs:complexType> |
|
|
|
| 941 |
</xs:element> |
|
|
|
| 942 |
<xs:element name="month_of_normal_sample_procurement" default=""> |
|
|
|
| 943 |
<xs:complexType mixed="true"> |
|
|
|
| 944 |
<xs:simpleContent> |
|
|
|
| 945 |
<xs:extension base="utility:generic_month"> |
|
|
|
| 946 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 947 |
<xs:attribute name="cde" type="xs:string" default="3288195"/> |
|
|
|
| 948 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 949 |
</xs:extension> |
|
|
|
| 950 |
</xs:simpleContent> |
|
|
|
| 951 |
</xs:complexType> |
|
|
|
| 952 |
</xs:element> |
|
|
|
| 953 |
<xs:element name="year_of_normal_sample_procurement" default=""> |
|
|
|
| 954 |
<xs:complexType mixed="true"> |
|
|
|
| 955 |
<xs:simpleContent> |
|
|
|
| 956 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 957 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 958 |
<xs:attribute name="cde" type="xs:string" default="3288197"/> |
|
|
|
| 959 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 960 |
</xs:extension> |
|
|
|
| 961 |
</xs:simpleContent> |
|
|
|
| 962 |
</xs:complexType> |
|
|
|
| 963 |
</xs:element> |
|
|
|
| 964 |
<xs:element name="tumor_pathology"> |
|
|
|
| 965 |
<xs:complexType> |
|
|
|
| 966 |
<xs:sequence> |
|
|
|
| 967 |
<xs:element ref="primary_or_metastatic_status" minOccurs="0"/> |
|
|
|
| 968 |
<xs:element ref="margins_involved" minOccurs="0"/> |
|
|
|
| 969 |
<xs:element ref="venous_invasion" minOccurs="0"/> |
|
|
|
| 970 |
<xs:element ref="lymphatic_invasion" minOccurs="0"/> |
|
|
|
| 971 |
<xs:element ref="number_regional_lymphnodes_exam" minOccurs="0"/> |
|
|
|
| 972 |
<xs:element ref="number_regional_lymphnodes_pos" minOccurs="0"/> |
|
|
|
| 973 |
<xs:element ref="verification_by_bcr" minOccurs="0"/> |
|
|
|
| 974 |
<xs:element ref="type" minOccurs="0"/> |
|
|
|
| 975 |
</xs:sequence> |
|
|
|
| 976 |
</xs:complexType> |
|
|
|
| 977 |
</xs:element> |
|
|
|
| 978 |
<xs:element name="primary_or_metastatic_status"> |
|
|
|
| 979 |
<xs:complexType> |
|
|
|
| 980 |
<xs:simpleContent> |
|
|
|
| 981 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 982 |
<xs:enumeration value=""/> |
|
|
|
| 983 |
<xs:enumeration value="PRIMARY"/> |
|
|
|
| 984 |
<xs:enumeration value="METASTATIC"/> |
|
|
|
| 985 |
<xs:enumeration value="MALIGNANT"/> |
|
|
|
| 986 |
<xs:enumeration value="NON-MALIGNANT"/> |
|
|
|
| 987 |
<xs:attribute name="cde" type="xs:string" default="2673765"/> |
|
|
|
| 988 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 989 |
</xs:restriction> |
|
|
|
| 990 |
</xs:simpleContent> |
|
|
|
| 991 |
</xs:complexType> |
|
|
|
| 992 |
</xs:element> |
|
|
|
| 993 |
<xs:element name="margins_involved"> |
|
|
|
| 994 |
<xs:complexType> |
|
|
|
| 995 |
<xs:simpleContent> |
|
|
|
| 996 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 997 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 998 |
<xs:attribute name="cde" type="xs:string" default="2608099"/> |
|
|
|
| 999 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1000 |
</xs:extension> |
|
|
|
| 1001 |
</xs:simpleContent> |
|
|
|
| 1002 |
</xs:complexType> |
|
|
|
| 1003 |
</xs:element> |
|
|
|
| 1004 |
<xs:element name="venous_invasion"> |
|
|
|
| 1005 |
<xs:complexType> |
|
|
|
| 1006 |
<xs:simpleContent> |
|
|
|
| 1007 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1008 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1009 |
<xs:attribute name="cde" type="xs:string" default="64358"/> |
|
|
|
| 1010 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1011 |
</xs:extension> |
|
|
|
| 1012 |
</xs:simpleContent> |
|
|
|
| 1013 |
</xs:complexType> |
|
|
|
| 1014 |
</xs:element> |
|
|
|
| 1015 |
<xs:element name="lymphatic_invasion"> |
|
|
|
| 1016 |
<xs:complexType> |
|
|
|
| 1017 |
<xs:simpleContent> |
|
|
|
| 1018 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1019 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1020 |
<xs:attribute name="cde" type="xs:string" default="64171"/> |
|
|
|
| 1021 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1022 |
</xs:extension> |
|
|
|
| 1023 |
</xs:simpleContent> |
|
|
|
| 1024 |
</xs:complexType> |
|
|
|
| 1025 |
</xs:element> |
|
|
|
| 1026 |
<xs:element name="number_regional_lymphnodes_exam"> |
|
|
|
| 1027 |
<xs:complexType> |
|
|
|
| 1028 |
<xs:simpleContent> |
|
|
|
| 1029 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1030 |
<xs:attribute name="cde" type="xs:string" default="2673768"/> |
|
|
|
| 1031 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1032 |
</xs:restriction> |
|
|
|
| 1033 |
</xs:simpleContent> |
|
|
|
| 1034 |
</xs:complexType> |
|
|
|
| 1035 |
</xs:element> |
|
|
|
| 1036 |
<xs:element name="number_regional_lymphnodes_pos"> |
|
|
|
| 1037 |
<xs:complexType> |
|
|
|
| 1038 |
<xs:simpleContent> |
|
|
|
| 1039 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1040 |
<xs:attribute name="cde" type="xs:string" default="2673770"/> |
|
|
|
| 1041 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1042 |
</xs:restriction> |
|
|
|
| 1043 |
</xs:simpleContent> |
|
|
|
| 1044 |
</xs:complexType> |
|
|
|
| 1045 |
</xs:element> |
|
|
|
| 1046 |
<xs:element name="verification_by_bcr"> |
|
|
|
| 1047 |
<xs:complexType> |
|
|
|
| 1048 |
<xs:simpleContent> |
|
|
|
| 1049 |
<xs:extension base="xs:NCName"> |
|
|
|
| 1050 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1051 |
<xs:attribute name="cde" type="xs:string" default="2673771"/> |
|
|
|
| 1052 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1053 |
</xs:extension> |
|
|
|
| 1054 |
</xs:simpleContent> |
|
|
|
| 1055 |
</xs:complexType> |
|
|
|
| 1056 |
</xs:element> |
|
|
|
| 1057 |
<xs:element name="type"> |
|
|
|
| 1058 |
<xs:complexType mixed="true"> |
|
|
|
| 1059 |
<xs:choice minOccurs="0" maxOccurs="unbounded"> |
|
|
|
| 1060 |
<xs:element ref="gbm_pathology"/> |
|
|
|
| 1061 |
<xs:element ref="lung_pathology"/> |
|
|
|
| 1062 |
<xs:element ref="ovarian_pathology"/> |
|
|
|
| 1063 |
<xs:element ref="gbm_slide"/> |
|
|
|
| 1064 |
<xs:element ref="lung_slide"/> |
|
|
|
| 1065 |
<xs:element ref="ovarian_slide"/> |
|
|
|
| 1066 |
<xs:element ref="radiation_type"/> |
|
|
|
| 1067 |
<xs:element ref="analyte_type"/> |
|
|
|
| 1068 |
</xs:choice> |
|
|
|
| 1069 |
<xs:attribute name="cde"/> |
|
|
|
| 1070 |
<xs:attribute name="procurement_status"/> |
|
|
|
| 1071 |
<xs:attribute name="xsd_ver" default="1.8"/> |
|
|
|
| 1072 |
</xs:complexType> |
|
|
|
| 1073 |
</xs:element> |
|
|
|
| 1074 |
<xs:element name="gbm_pathology"> |
|
|
|
| 1075 |
<xs:complexType> |
|
|
|
| 1076 |
<xs:sequence> |
|
|
|
| 1077 |
<xs:element ref="histologic_type"/> |
|
|
|
| 1078 |
<xs:element ref="histologic_nuclear_grade"/> |
|
|
|
| 1079 |
<xs:element ref="tumor_sample_anatomic_location"/> |
|
|
|
| 1080 |
<xs:element ref="gemistocytes_present"/> |
|
|
|
| 1081 |
<xs:element ref="oligodendroglial_component"/> |
|
|
|
| 1082 |
<xs:element ref="leptomeningeal_involement"/> |
|
|
|
| 1083 |
<xs:element ref="gfap_positive"/> |
|
|
|
| 1084 |
<xs:element ref="mib1_positive"/> |
|
|
|
| 1085 |
</xs:sequence> |
|
|
|
| 1086 |
</xs:complexType> |
|
|
|
| 1087 |
</xs:element> |
|
|
|
| 1088 |
<xs:element name="histologic_type"> |
|
|
|
| 1089 |
<xs:complexType> |
|
|
|
| 1090 |
<xs:simpleContent> |
|
|
|
| 1091 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1092 |
<xs:enumeration value=""/> |
|
|
|
| 1093 |
<xs:enumeration value="ANAPLASTIC ASTROCYTOMA"/> |
|
|
|
| 1094 |
<xs:enumeration value="GIANT CELL GLIOBLASTOMA"/> |
|
|
|
| 1095 |
<xs:enumeration value="GLIOBLASTOMA"/> |
|
|
|
| 1096 |
<xs:enumeration value="GLIOSARCOMA"/> |
|
|
|
| 1097 |
<xs:enumeration value="GLIOBLASTOMA MULTIFORME"/> |
|
|
|
| 1098 |
<xs:enumeration value="NO HISTOLOGY AVAILABLE"/> |
|
|
|
| 1099 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1100 |
</xs:restriction> |
|
|
|
| 1101 |
</xs:simpleContent> |
|
|
|
| 1102 |
</xs:complexType> |
|
|
|
| 1103 |
</xs:element> |
|
|
|
| 1104 |
<xs:element name="histologic_nuclear_grade"> |
|
|
|
| 1105 |
<xs:complexType> |
|
|
|
| 1106 |
<xs:simpleContent> |
|
|
|
| 1107 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1108 |
<xs:enumeration value=""/> |
|
|
|
| 1109 |
<xs:enumeration value="LOW"/> |
|
|
|
| 1110 |
<xs:enumeration value="HIGH"/> |
|
|
|
| 1111 |
<xs:enumeration value="1"/> |
|
|
|
| 1112 |
<xs:enumeration value="2"/> |
|
|
|
| 1113 |
<xs:enumeration value="3"/> |
|
|
|
| 1114 |
<xs:enumeration value="4"/> |
|
|
|
| 1115 |
<xs:attribute name="cde" type="xs:string" default="2673857"/> |
|
|
|
| 1116 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1117 |
</xs:restriction> |
|
|
|
| 1118 |
</xs:simpleContent> |
|
|
|
| 1119 |
</xs:complexType> |
|
|
|
| 1120 |
</xs:element> |
|
|
|
| 1121 |
<xs:element name="tumor_sample_anatomic_location"> |
|
|
|
| 1122 |
<xs:complexType> |
|
|
|
| 1123 |
<xs:simpleContent> |
|
|
|
| 1124 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1125 |
<xs:enumeration value=""/> |
|
|
|
| 1126 |
<xs:enumeration value="C70.0"/> |
|
|
|
| 1127 |
<xs:enumeration value="C71.0"/> |
|
|
|
| 1128 |
<xs:enumeration value="C71.1"/> |
|
|
|
| 1129 |
<xs:enumeration value="C71.2"/> |
|
|
|
| 1130 |
<xs:enumeration value="C71.3"/> |
|
|
|
| 1131 |
<xs:enumeration value="C71.4"/> |
|
|
|
| 1132 |
<xs:enumeration value="C71.5"/> |
|
|
|
| 1133 |
<xs:enumeration value="C71.6"/> |
|
|
|
| 1134 |
<xs:enumeration value="C71.7"/> |
|
|
|
| 1135 |
<xs:enumeration value="C71.8"/> |
|
|
|
| 1136 |
<xs:enumeration value="C71.9"/> |
|
|
|
| 1137 |
<xs:enumeration value="C72.0"/> |
|
|
|
| 1138 |
<xs:enumeration value="C72.9"/> |
|
|
|
| 1139 |
<xs:enumeration value="C34.0"/> |
|
|
|
| 1140 |
<xs:enumeration value="C34.1"/> |
|
|
|
| 1141 |
<xs:enumeration value="C34.2"/> |
|
|
|
| 1142 |
<xs:enumeration value="C34.3"/> |
|
|
|
| 1143 |
<xs:enumeration value="C34.8"/> |
|
|
|
| 1144 |
<xs:enumeration value="C34.9"/> |
|
|
|
| 1145 |
<xs:enumeration value="BRAIN, NOS"/> |
|
|
|
| 1146 |
<xs:enumeration value="BLOOD"/> |
|
|
|
| 1147 |
<xs:enumeration value="CEREBRAL MENINGES"/> |
|
|
|
| 1148 |
<xs:enumeration value="CEREBRUM"/> |
|
|
|
| 1149 |
<xs:enumeration value="FRONTAL LOBE"/> |
|
|
|
| 1150 |
<xs:enumeration value="TEMPORAL LOBE"/> |
|
|
|
| 1151 |
<xs:enumeration value="PARIETAL LOBE"/> |
|
|
|
| 1152 |
<xs:enumeration value="OCCIPITAL LOBE"/> |
|
|
|
| 1153 |
<xs:enumeration value="VENTRICLE, NOS"/> |
|
|
|
| 1154 |
<xs:enumeration value="CEREBELLUM, NOS"/> |
|
|
|
| 1155 |
<xs:enumeration value="BRAIN STEM"/> |
|
|
|
| 1156 |
<xs:enumeration value="OVERLAPPING LESION OF BRAIN"/> |
|
|
|
| 1157 |
<xs:enumeration value="SPINAL CORD"/> |
|
|
|
| 1158 |
<xs:enumeration value="NERVOUS SYSTEM, NOS"/> |
|
|
|
| 1159 |
<xs:attribute name="cde" type="xs:string" default="2673858"/> |
|
|
|
| 1160 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1161 |
</xs:restriction> |
|
|
|
| 1162 |
</xs:simpleContent> |
|
|
|
| 1163 |
</xs:complexType> |
|
|
|
| 1164 |
</xs:element> |
|
|
|
| 1165 |
<xs:element name="gemistocytes_present"> |
|
|
|
| 1166 |
<xs:complexType> |
|
|
|
| 1167 |
<xs:simpleContent> |
|
|
|
| 1168 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1169 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1170 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 1171 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1172 |
</xs:extension> |
|
|
|
| 1173 |
</xs:simpleContent> |
|
|
|
| 1174 |
</xs:complexType> |
|
|
|
| 1175 |
</xs:element> |
|
|
|
| 1176 |
<xs:element name="oligodendroglial_component"> |
|
|
|
| 1177 |
<xs:complexType> |
|
|
|
| 1178 |
<xs:simpleContent> |
|
|
|
| 1179 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1180 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1181 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 1182 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1183 |
</xs:extension> |
|
|
|
| 1184 |
</xs:simpleContent> |
|
|
|
| 1185 |
</xs:complexType> |
|
|
|
| 1186 |
</xs:element> |
|
|
|
| 1187 |
<xs:element name="leptomeningeal_involement"> |
|
|
|
| 1188 |
<xs:complexType> |
|
|
|
| 1189 |
<xs:simpleContent> |
|
|
|
| 1190 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1191 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1192 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 1193 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1194 |
</xs:extension> |
|
|
|
| 1195 |
</xs:simpleContent> |
|
|
|
| 1196 |
</xs:complexType> |
|
|
|
| 1197 |
</xs:element> |
|
|
|
| 1198 |
<xs:element name="gfap_positive"> |
|
|
|
| 1199 |
<xs:complexType> |
|
|
|
| 1200 |
<xs:simpleContent> |
|
|
|
| 1201 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1202 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1203 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 1204 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1205 |
</xs:extension> |
|
|
|
| 1206 |
</xs:simpleContent> |
|
|
|
| 1207 |
</xs:complexType> |
|
|
|
| 1208 |
</xs:element> |
|
|
|
| 1209 |
<xs:element name="mib1_positive"> |
|
|
|
| 1210 |
<xs:complexType> |
|
|
|
| 1211 |
<xs:simpleContent> |
|
|
|
| 1212 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1213 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1214 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 1215 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1216 |
</xs:extension> |
|
|
|
| 1217 |
</xs:simpleContent> |
|
|
|
| 1218 |
</xs:complexType> |
|
|
|
| 1219 |
</xs:element> |
|
|
|
| 1220 |
<xs:element name="lung_pathology"> |
|
|
|
| 1221 |
<xs:complexType> |
|
|
|
| 1222 |
<xs:sequence> |
|
|
|
| 1223 |
<xs:element ref="histologic_nuclear_grade"/> |
|
|
|
| 1224 |
<xs:element ref="tumor_sample_anatomic_location"/> |
|
|
|
| 1225 |
<xs:element ref="tumor_sample_anatomic_location"/> |
|
|
|
| 1226 |
<xs:element ref="tnm_pathology_stage_grouping"/> |
|
|
|
| 1227 |
<xs:element ref="tnm_pathology_tumor_status"/> |
|
|
|
| 1228 |
<xs:element ref="tnm_pathology_lymphnode_status"/> |
|
|
|
| 1229 |
<xs:element ref="tnm_pathology_metastatic_status"/> |
|
|
|
| 1230 |
</xs:sequence> |
|
|
|
| 1231 |
</xs:complexType> |
|
|
|
| 1232 |
</xs:element> |
|
|
|
| 1233 |
<xs:element name="tnm_pathology_stage_grouping"> |
|
|
|
| 1234 |
<xs:complexType> |
|
|
|
| 1235 |
<xs:simpleContent> |
|
|
|
| 1236 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1237 |
<xs:enumeration value=""/> |
|
|
|
| 1238 |
<xs:enumeration value="0"/> |
|
|
|
| 1239 |
<xs:enumeration value="IA"/> |
|
|
|
| 1240 |
<xs:enumeration value="IB"/> |
|
|
|
| 1241 |
<xs:enumeration value="IC"/> |
|
|
|
| 1242 |
<xs:enumeration value="II"/> |
|
|
|
| 1243 |
<xs:enumeration value="IIA"/> |
|
|
|
| 1244 |
<xs:enumeration value="IIB"/> |
|
|
|
| 1245 |
<xs:enumeration value="IIC"/> |
|
|
|
| 1246 |
<xs:enumeration value="III"/> |
|
|
|
| 1247 |
<xs:enumeration value="IIIA"/> |
|
|
|
| 1248 |
<xs:enumeration value="IIIB"/> |
|
|
|
| 1249 |
<xs:enumeration value="IIIC"/> |
|
|
|
| 1250 |
<xs:enumeration value="IV"/> |
|
|
|
| 1251 |
</xs:restriction> |
|
|
|
| 1252 |
</xs:simpleContent> |
|
|
|
| 1253 |
</xs:complexType> |
|
|
|
| 1254 |
</xs:element> |
|
|
|
| 1255 |
<xs:element name="tnm_pathology_tumor_status"> |
|
|
|
| 1256 |
<xs:complexType> |
|
|
|
| 1257 |
<xs:simpleContent> |
|
|
|
| 1258 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1259 |
<xs:enumeration value=""/> |
|
|
|
| 1260 |
<xs:enumeration value="T0"/> |
|
|
|
| 1261 |
<xs:enumeration value="T1"/> |
|
|
|
| 1262 |
<xs:enumeration value="T1A"/> |
|
|
|
| 1263 |
<xs:enumeration value="T1B"/> |
|
|
|
| 1264 |
<xs:enumeration value="T1C"/> |
|
|
|
| 1265 |
<xs:enumeration value="T2"/> |
|
|
|
| 1266 |
<xs:enumeration value="T2A"/> |
|
|
|
| 1267 |
<xs:enumeration value="T2B"/> |
|
|
|
| 1268 |
<xs:enumeration value="T2C"/> |
|
|
|
| 1269 |
<xs:enumeration value="T3"/> |
|
|
|
| 1270 |
<xs:enumeration value="T3A"/> |
|
|
|
| 1271 |
<xs:enumeration value="T3B"/> |
|
|
|
| 1272 |
<xs:enumeration value="T3C"/> |
|
|
|
| 1273 |
<xs:enumeration value="T4"/> |
|
|
|
| 1274 |
<xs:enumeration value="TIS"/> |
|
|
|
| 1275 |
<xs:enumeration value="TX"/> |
|
|
|
| 1276 |
</xs:restriction> |
|
|
|
| 1277 |
</xs:simpleContent> |
|
|
|
| 1278 |
</xs:complexType> |
|
|
|
| 1279 |
</xs:element> |
|
|
|
| 1280 |
<xs:element name="tnm_pathology_lymphnode_status"> |
|
|
|
| 1281 |
<xs:complexType> |
|
|
|
| 1282 |
<xs:simpleContent> |
|
|
|
| 1283 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1284 |
<xs:enumeration value=""/> |
|
|
|
| 1285 |
<xs:enumeration value="N0"/> |
|
|
|
| 1286 |
<xs:enumeration value="N1"/> |
|
|
|
| 1287 |
<xs:enumeration value="N2"/> |
|
|
|
| 1288 |
<xs:enumeration value="N3"/> |
|
|
|
| 1289 |
<xs:enumeration value="NX"/> |
|
|
|
| 1290 |
</xs:restriction> |
|
|
|
| 1291 |
</xs:simpleContent> |
|
|
|
| 1292 |
</xs:complexType> |
|
|
|
| 1293 |
</xs:element> |
|
|
|
| 1294 |
<xs:element name="tnm_pathology_metastatic_status"> |
|
|
|
| 1295 |
<xs:complexType> |
|
|
|
| 1296 |
<xs:simpleContent> |
|
|
|
| 1297 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1298 |
<xs:enumeration value=""/> |
|
|
|
| 1299 |
<xs:enumeration value="M0"/> |
|
|
|
| 1300 |
<xs:enumeration value="M1"/> |
|
|
|
| 1301 |
<xs:enumeration value="MX"/> |
|
|
|
| 1302 |
</xs:restriction> |
|
|
|
| 1303 |
</xs:simpleContent> |
|
|
|
| 1304 |
</xs:complexType> |
|
|
|
| 1305 |
</xs:element> |
|
|
|
| 1306 |
<xs:element name="ovarian_pathology"> |
|
|
|
| 1307 |
<xs:complexType> |
|
|
|
| 1308 |
<xs:sequence> |
|
|
|
| 1309 |
<xs:element ref="histologic_nuclear_grade"/> |
|
|
|
| 1310 |
<xs:element ref="tumor_sample_anatomic_location"/> |
|
|
|
| 1311 |
<xs:element ref="tnm_pathology_stage_grouping"/> |
|
|
|
| 1312 |
<xs:element ref="tnm_pathology_tumor_status"/> |
|
|
|
| 1313 |
<xs:element ref="tnm_pathology_lymphnode_status"/> |
|
|
|
| 1314 |
<xs:element ref="tnm_pathology_metastatic_status"/> |
|
|
|
| 1315 |
</xs:sequence> |
|
|
|
| 1316 |
</xs:complexType> |
|
|
|
| 1317 |
</xs:element> |
|
|
|
| 1318 |
<xs:element name="gbm_slide"> |
|
|
|
| 1319 |
<xs:complexType> |
|
|
|
| 1320 |
<xs:sequence> |
|
|
|
| 1321 |
<xs:element ref="endothelial_proliferation"/> |
|
|
|
| 1322 |
<xs:element ref="nuclear_pleomorphism"/> |
|
|
|
| 1323 |
<xs:element ref="palisading_necrosis"/> |
|
|
|
| 1324 |
<xs:element ref="cellularity"/> |
|
|
|
| 1325 |
</xs:sequence> |
|
|
|
| 1326 |
</xs:complexType> |
|
|
|
| 1327 |
</xs:element> |
|
|
|
| 1328 |
<xs:element name="endothelial_proliferation"> |
|
|
|
| 1329 |
<xs:complexType> |
|
|
|
| 1330 |
<xs:simpleContent> |
|
|
|
| 1331 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1332 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1333 |
<xs:attribute name="cde" type="xs:string" default="2841309"/> |
|
|
|
| 1334 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1335 |
</xs:extension> |
|
|
|
| 1336 |
</xs:simpleContent> |
|
|
|
| 1337 |
</xs:complexType> |
|
|
|
| 1338 |
</xs:element> |
|
|
|
| 1339 |
<xs:element name="nuclear_pleomorphism"> |
|
|
|
| 1340 |
<xs:complexType> |
|
|
|
| 1341 |
<xs:simpleContent> |
|
|
|
| 1342 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1343 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1344 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 1345 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1346 |
</xs:extension> |
|
|
|
| 1347 |
</xs:simpleContent> |
|
|
|
| 1348 |
</xs:complexType> |
|
|
|
| 1349 |
</xs:element> |
|
|
|
| 1350 |
<xs:element name="palisading_necrosis"> |
|
|
|
| 1351 |
<xs:complexType> |
|
|
|
| 1352 |
<xs:simpleContent> |
|
|
|
| 1353 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1354 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1355 |
<xs:attribute name="cde" type="xs:string" default="2841321"/> |
|
|
|
| 1356 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1357 |
</xs:extension> |
|
|
|
| 1358 |
</xs:simpleContent> |
|
|
|
| 1359 |
</xs:complexType> |
|
|
|
| 1360 |
</xs:element> |
|
|
|
| 1361 |
<xs:element name="cellularity"> |
|
|
|
| 1362 |
<xs:complexType> |
|
|
|
| 1363 |
<xs:simpleContent> |
|
|
|
| 1364 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1365 |
<xs:enumeration value=""/> |
|
|
|
| 1366 |
<xs:enumeration value="LOW"/> |
|
|
|
| 1367 |
<xs:enumeration value="MEDIUM"/> |
|
|
|
| 1368 |
<xs:enumeration value="HIGH"/> |
|
|
|
| 1369 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1370 |
</xs:restriction> |
|
|
|
| 1371 |
</xs:simpleContent> |
|
|
|
| 1372 |
</xs:complexType> |
|
|
|
| 1373 |
</xs:element> |
|
|
|
| 1374 |
<xs:element name="lung_slide"> |
|
|
|
| 1375 |
<xs:complexType/> |
|
|
|
| 1376 |
</xs:element> |
|
|
|
| 1377 |
<xs:element name="ovarian_slide"> |
|
|
|
| 1378 |
<xs:complexType/> |
|
|
|
| 1379 |
</xs:element> |
|
|
|
| 1380 |
<xs:element name="radiation_type"> |
|
|
|
| 1381 |
<xs:complexType> |
|
|
|
| 1382 |
<xs:simpleContent> |
|
|
|
| 1383 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1384 |
<xs:enumeration value=""/> |
|
|
|
| 1385 |
<xs:enumeration value="EXTERNAL BEAM"/> |
|
|
|
| 1386 |
<xs:enumeration value="IMPLANTS"/> |
|
|
|
| 1387 |
<xs:enumeration value="RADIOISOTOPES"/> |
|
|
|
| 1388 |
<xs:enumeration value="COMBINATION"/> |
|
|
|
| 1389 |
<xs:enumeration value="OTHER: SPECIFY IN NOTES"/> |
|
|
|
| 1390 |
<xs:attribute name="cde" type="xs:string" default="2842944"/> |
|
|
|
| 1391 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1392 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 1393 |
</xs:restriction> |
|
|
|
| 1394 |
</xs:simpleContent> |
|
|
|
| 1395 |
</xs:complexType> |
|
|
|
| 1396 |
</xs:element> |
|
|
|
| 1397 |
<xs:element name="analyte_type"> |
|
|
|
| 1398 |
<xs:complexType> |
|
|
|
| 1399 |
<xs:simpleContent> |
|
|
|
| 1400 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1401 |
<xs:enumeration value=""/> |
|
|
|
| 1402 |
<xs:enumeration value="DNA"/> |
|
|
|
| 1403 |
<xs:enumeration value="EBV Immortalized Normal"/> |
|
|
|
| 1404 |
<xs:enumeration value="GenomePlex (Rubicon) Amplified DNA"/> |
|
|
|
| 1405 |
<xs:enumeration value="Repli-G (Qiagen) DNA"/> |
|
|
|
| 1406 |
<xs:enumeration value="Repli-G X (Qiagen) DNA"/> |
|
|
|
| 1407 |
<xs:enumeration value="RNA"/> |
|
|
|
| 1408 |
<xs:enumeration value="Total RNA"/> |
|
|
|
| 1409 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.10"/> |
|
|
|
| 1410 |
</xs:restriction> |
|
|
|
| 1411 |
</xs:simpleContent> |
|
|
|
| 1412 |
</xs:complexType> |
|
|
|
| 1413 |
</xs:element> |
|
|
|
| 1414 |
<xs:element name="method_of_sample_procurement"> |
|
|
|
| 1415 |
<xs:complexType mixed="true"> |
|
|
|
| 1416 |
<xs:simpleContent> |
|
|
|
| 1417 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1418 |
<xs:attribute name="cde" type="xs:string" default="3103514"/> |
|
|
|
| 1419 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 1420 |
</xs:restriction> |
|
|
|
| 1421 |
</xs:simpleContent> |
|
|
|
| 1422 |
</xs:complexType> |
|
|
|
| 1423 |
</xs:element> |
|
|
|
| 1424 |
<xs:element name="differential_report_submitted" nillable="true"> |
|
|
|
| 1425 |
<xs:complexType mixed="true"> |
|
|
|
| 1426 |
<xs:simpleContent> |
|
|
|
| 1427 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1428 |
<xs:attribute name="cde" type="xs:string" default=""/> |
|
|
|
| 1429 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 1430 |
</xs:restriction> |
|
|
|
| 1431 |
</xs:simpleContent> |
|
|
|
| 1432 |
</xs:complexType> |
|
|
|
| 1433 |
</xs:element> |
|
|
|
| 1434 |
<xs:element name="hiv_positive_status" nillable="true"> |
|
|
|
| 1435 |
<xs:complexType mixed="true"> |
|
|
|
| 1436 |
<xs:simpleContent> |
|
|
|
| 1437 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1438 |
<xs:attribute name="cde" type="xs:string" default="2180464"/> |
|
|
|
| 1439 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 1440 |
</xs:restriction> |
|
|
|
| 1441 |
</xs:simpleContent> |
|
|
|
| 1442 |
</xs:complexType> |
|
|
|
| 1443 |
</xs:element> |
|
|
|
| 1444 |
<xs:element name="b_cell_tumor_slide_submitted" nillable="true"> |
|
|
|
| 1445 |
<xs:complexType mixed="true"> |
|
|
|
| 1446 |
<xs:simpleContent> |
|
|
|
| 1447 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1448 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1449 |
<xs:attribute name="cde" type="xs:string" default="3320292"/> |
|
|
|
| 1450 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 1451 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 1452 |
</xs:extension> |
|
|
|
| 1453 |
</xs:simpleContent> |
|
|
|
| 1454 |
</xs:complexType> |
|
|
|
| 1455 |
</xs:element> |
|
|
|
| 1456 |
<xs:element name="t_cell_tumor_slide_submitted" nillable="true"> |
|
|
|
| 1457 |
<xs:complexType mixed="true"> |
|
|
|
| 1458 |
<xs:simpleContent> |
|
|
|
| 1459 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1460 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1461 |
<xs:attribute name="cde" type="xs:string" default="3320295"/> |
|
|
|
| 1462 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 1463 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 1464 |
</xs:extension> |
|
|
|
| 1465 |
</xs:simpleContent> |
|
|
|
| 1466 |
</xs:complexType> |
|
|
|
| 1467 |
</xs:element> |
|
|
|
| 1468 |
<xs:element name="submitted_for_lce"> |
|
|
|
| 1469 |
<xs:complexType> |
|
|
|
| 1470 |
<xs:simpleContent> |
|
|
|
| 1471 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1472 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1473 |
<xs:attribute name="cde" type="xs:string" default="3288488"/> |
|
|
|
| 1474 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8"/> |
|
|
|
| 1475 |
</xs:extension> |
|
|
|
| 1476 |
</xs:simpleContent> |
|
|
|
| 1477 |
</xs:complexType> |
|
|
|
| 1478 |
</xs:element> |
|
|
|
| 1479 |
<xs:element name="maximum_tumor_dimension" nillable="true"> |
|
|
|
| 1480 |
<xs:complexType mixed="true"> |
|
|
|
| 1481 |
<xs:simpleContent> |
|
|
|
| 1482 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1483 |
<xs:attribute name="cde" type="xs:string" default="64215"/> |
|
|
|
| 1484 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 1485 |
</xs:restriction> |
|
|
|
| 1486 |
</xs:simpleContent> |
|
|
|
| 1487 |
</xs:complexType> |
|
|
|
| 1488 |
</xs:element> |
|
|
|
| 1489 |
<xs:element name="h_and_e_tumor_slide_submitted" default="" nillable="true"> |
|
|
|
| 1490 |
<xs:complexType mixed="true"> |
|
|
|
| 1491 |
<xs:simpleContent> |
|
|
|
| 1492 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1493 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1494 |
<xs:attribute name="cde" type="xs:string" default="3081944"/> |
|
|
|
| 1495 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 1496 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 1497 |
</xs:extension> |
|
|
|
| 1498 |
</xs:simpleContent> |
|
|
|
| 1499 |
</xs:complexType> |
|
|
|
| 1500 |
</xs:element> |
|
|
|
| 1501 |
<xs:element name="reason_path_confirm_diagnosis_not_matching" nillable="true"> |
|
|
|
| 1502 |
<xs:complexType> |
|
|
|
| 1503 |
<xs:simpleContent> |
|
|
|
| 1504 |
<xs:extension base="xs:string"> |
|
|
|
| 1505 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 1506 |
<xs:attribute name="cde" type="xs:string" default="3288315"/> |
|
|
|
| 1507 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 1508 |
</xs:extension> |
|
|
|
| 1509 |
</xs:simpleContent> |
|
|
|
| 1510 |
</xs:complexType> |
|
|
|
| 1511 |
</xs:element> |
|
|
|
| 1512 |
<xs:element name="days_to_sample_procurement" default="" nillable="true"> |
|
|
|
| 1513 |
<xs:complexType mixed="true"> |
|
|
|
| 1514 |
<xs:simpleContent> |
|
|
|
| 1515 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1516 |
<xs:attribute name="cde" type="xs:string" default="3288495"/> |
|
|
|
| 1517 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 1518 |
</xs:restriction> |
|
|
|
| 1519 |
</xs:simpleContent> |
|
|
|
| 1520 |
</xs:complexType> |
|
|
|
| 1521 |
</xs:element> |
|
|
|
| 1522 |
<xs:element name="days_to_normal_sample_procurement" default="" nillable="true"> |
|
|
|
| 1523 |
<xs:complexType mixed="true"> |
|
|
|
| 1524 |
<xs:simpleContent> |
|
|
|
| 1525 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1526 |
<xs:attribute name="cde" type="xs:string" default="3288496"/> |
|
|
|
| 1527 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 1528 |
</xs:restriction> |
|
|
|
| 1529 |
</xs:simpleContent> |
|
|
|
| 1530 |
</xs:complexType> |
|
|
|
| 1531 |
</xs:element> |
|
|
|
| 1532 |
<xs:element name="days_to_pathology_review" default="" nillable="true"> |
|
|
|
| 1533 |
<xs:complexType mixed="true"> |
|
|
|
| 1534 |
<xs:simpleContent> |
|
|
|
| 1535 |
<xs:restriction base="utility:common_res_attributes"> |
|
|
|
| 1536 |
<xs:attribute name="cde" type="xs:string" default="3288497"/> |
|
|
|
| 1537 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5"/> |
|
|
|
| 1538 |
</xs:restriction> |
|
|
|
| 1539 |
</xs:simpleContent> |
|
|
|
| 1540 |
</xs:complexType> |
|
|
|
| 1541 |
</xs:element> |
|
|
|
| 1542 |
</xs:schema> |
|
|
|
| 3 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 5 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 6 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 7 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 8 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 9 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 10 |
xmlns:follow_up_v1.0="http://tcga.nci/bcr/xml/clinical/gbm/followup/2.5/1.0" |
|
|
|
| 11 |
xmlns="http://tcga.nci/bcr/xml/clinical/gbm/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/gbm/2.4" |
| 12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/gbm/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/gbm/2.4" |
| |
| 28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/gbm/followup/2.5/1.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/gbm/followup/2.5/TCGA_BCR.GBM_Clinical_FollowUp_v1.0.xsd" /> |
|
|
|
| |
| 42 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 50 |
<xs:element ref="shared:tumor_histologic_subtype" /> |
<> |
49 |
<xs:element ref="histological_type" /> |
| |
| |
|
-+ |
89 |
<xs:element ref="shared:pretreatment_history" /> |
| |
|
|
90 |
<xs:element ref="radiation_therapy" /> |
| |
| |
|
<> |
109 |
<xs:element ref="shared:chemo_therapy" /> |
| |
|
|
110 |
<xs:element ref="shared:immuno_therapy" /> |
| |
|
|
111 |
<xs:element ref="shared:hormonal_therapy" /> |
| 98 |
<xs:element ref="shared:person_neoplasm_cancer_status" /> |
|
112 |
<xs:element ref="shared:targeted_molecular_therapy" /> |
| |
| 101 |
<xs:element ref="shared:day_of_form_completion" /> |
<> |
116 |
<xs:element ref="shared:day_of_tumor_progression" /> |
| 102 |
<xs:element ref="shared:month_of_form_completion" /> |
|
117 |
<xs:element ref="shared:month_of_tumor_progression" /> |
| 103 |
<xs:element ref="shared:year_of_form_completion" /> |
|
118 |
<xs:element ref="shared:year_of_tumor_progression" /> |
| |
| 105 |
<xs:element ref="shared:days_to_form_completion" /> |
<> |
121 |
<xs:element ref="shared:days_to_tumor_progression" /> |
| |
| |
|
-+ |
124 |
<xs:choice> |
| |
|
|
125 |
<xs:sequence> |
| |
|
|
126 |
<xs:element ref="shared:day_of_tumor_recurrence" /> |
| |
|
|
127 |
<xs:element ref="shared:month_of_tumor_recurrence" /> |
| |
|
|
128 |
<xs:element ref="shared:year_of_tumor_recurrence" /> |
| |
|
|
129 |
</xs:sequence> |
| |
| |
|
-+ |
131 |
<xs:element ref="shared:days_to_tumor_recurrence" /> |
| |
|
|
132 |
</xs:choice> |
| |
| 109 |
<xs:element ref="shared:pretreatment_history" /> |
<> |
135 |
<xs:element ref="shared:additional_radiation_therapy" /> |
| 110 |
<xs:element ref="shared:initial_pathologic_diagnosis_method" /> |
|
136 |
<xs:element ref="additional_chemo_therapy" /> |
| 111 |
<xs:element ref="shared:anatomic_organ_subdivision" /> |
|
137 |
<xs:element ref="additional_immuno_therapy" /> |
| |
| 114 |
<xs:element ref="shared:karnofsky_performance_score" /> |
<> |
138 |
<xs:element ref="shared:additional_pharmaceutical_therapy" /> |
| 115 |
<xs:element ref="shared:eastern_cancer_oncology_group" /> |
|
139 |
<xs:element ref="additional_drug_therapy" /> |
| |
|
|
140 |
<xs:element ref="anatomic_organ_subdivision" /> |
| |
|
|
141 |
<xs:element ref="initial_pathologic_diagnosis_method" /> |
| 116 |
<xs:element ref="shared:performance_status_scale_timing" /> |
|
142 |
<xs:element ref="shared:person_neoplasm_cancer_status" /> |
| 117 |
<xs:element ref="rx:drugs" /> |
|
143 |
<xs:element ref="drugs" /> |
| 118 |
<xs:element ref="rad:radiations" /> |
|
144 |
<xs:element ref="radiations" /> |
| |
| 120 |
<xs:element name="follow_ups"> |
<> |
145 |
<xs:element ref="examinations" /> |
| 121 |
<xs:annotation> |
|
|
|
| 122 |
<xs:documentation>We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
|
|
| 123 |
</xs:annotation> |
|
|
|
| 124 |
<xs:complexType> |
|
|
|
| 125 |
<xs:sequence> |
|
146 |
<xs:element ref="surgeries" /> |
| 126 |
<xs:element ref="follow_up_v1.0:follow_up_v1.0" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| |
| |
|
<> |
151 |
<xs:element name="histological_type" nillable="true"> |
| |
|
|
152 |
<xs:complexType mixed="true"> |
| |
|
|
153 |
<xs:simpleContent> |
| |
|
|
154 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
155 |
<xs:attribute name="cde" type="xs:string" default="2831122" /> |
| |
|
|
156 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
157 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 130 |
</xs:sequence> |
|
158 |
</xs:restriction> |
| |
|
|
159 |
</xs:simpleContent> |
| |
| |
|
-+ |
176 |
<xs:element name="additional_chemo_therapy" nillable="true"> |
| |
|
|
177 |
<xs:complexType> |
| |
|
|
178 |
<xs:simpleContent> |
| |
|
|
179 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
180 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
181 |
<xs:attribute name="cde" type="xs:string" default="2650626" /> |
| |
|
|
182 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
183 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
184 |
</xs:extension> |
| |
|
|
185 |
</xs:simpleContent> |
| |
|
|
186 |
</xs:complexType> |
| |
|
|
187 |
</xs:element> |
| |
| |
|
-+ |
189 |
<xs:element name="additional_immuno_therapy" nillable="true"> |
| |
|
|
190 |
<xs:complexType> |
| |
|
|
191 |
<xs:simpleContent> |
| |
|
|
192 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
193 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
194 |
<xs:attribute name="cde" type="xs:string" default="2759828" /> |
| |
|
|
195 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
196 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
197 |
</xs:extension> |
| |
|
|
198 |
</xs:simpleContent> |
| |
|
|
199 |
</xs:complexType> |
| |
|
|
200 |
</xs:element> |
| |
| |
|
-+ |
202 |
<xs:element name="additional_drug_therapy" nillable="true"> |
| |
|
|
203 |
<xs:complexType> |
| |
|
|
204 |
<xs:simpleContent> |
| |
|
|
205 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
206 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
207 |
<xs:attribute name="cde" type="xs:string" default="2786150" /> |
| |
|
|
208 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
209 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
210 |
</xs:extension> |
| |
|
|
211 |
</xs:simpleContent> |
| |
|
|
212 |
</xs:complexType> |
| |
|
|
213 |
</xs:element> |
| |
| |
|
-+ |
215 |
<xs:element name="anatomic_organ_subdivision" nillable="true"> |
| |
|
|
216 |
<xs:complexType mixed="true"> |
| |
|
|
217 |
<xs:simpleContent> |
| |
|
|
218 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
219 |
<xs:attribute name="cde" type="xs:string" default="2008006" /> |
| |
|
|
220 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
221 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
222 |
</xs:restriction> |
| |
|
|
223 |
</xs:simpleContent> |
| |
|
|
224 |
</xs:complexType> |
| |
|
|
225 |
</xs:element> |
| |
| |
|
-+ |
227 |
<xs:element name="initial_pathologic_diagnosis_method" nillable="true"> |
| |
|
|
228 |
<xs:complexType> |
| |
|
|
229 |
<xs:simpleContent> |
| |
|
|
230 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
231 |
<xs:enumeration value="" /> |
| |
|
|
232 |
<xs:enumeration value="CYTOLOGY" /> |
| |
|
|
233 |
<xs:enumeration value="FINE NEEDLE ASPIRATION BIOPSY" /> |
| |
|
|
234 |
<xs:enumeration value="INCISION BIOPSY" /> |
| |
|
|
235 |
<xs:enumeration value="EXCISIONAL BIOPSY" /> |
| |
|
|
236 |
<xs:enumeration value="TUMOR RESECTION" /> |
| |
|
|
237 |
<xs:enumeration value="OTHER METHOD, SPECIFY IN NOTES" /> |
| |
|
|
238 |
<xs:attribute name="cde" type="xs:string" default="2757941" /> |
| |
|
|
239 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
240 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
241 |
</xs:restriction> |
| |
|
|
242 |
</xs:simpleContent> |
| |
|
|
243 |
</xs:complexType> |
| |
|
|
244 |
</xs:element> |
| |
| |
|
-+ |
246 |
<xs:element name="radiation_therapy"> |
| |
|
|
247 |
<xs:complexType> |
| |
|
|
248 |
<xs:simpleContent> |
| |
|
|
249 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
250 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
251 |
<xs:attribute name="cde" type="xs:string" default="2005312" /> |
| |
|
|
252 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
253 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
254 |
</xs:extension> |
| |
|
|
255 |
</xs:simpleContent> |
| |
|
|
256 |
</xs:complexType> |
| |
|
|
257 |
</xs:element> |
| |
| |
|
-+ |
259 |
<xs:element name="drugs"> |
| |
|
|
260 |
<xs:complexType> |
| |
|
|
261 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
| |
|
|
262 |
<xs:element ref="drug" /> |
| |
|
|
263 |
</xs:sequence> |
| |
|
|
264 |
</xs:complexType> |
| |
|
|
265 |
</xs:element> |
| |
| |
|
-+ |
267 |
<xs:element name="drug"> |
| |
|
|
268 |
<xs:complexType> |
| |
|
|
269 |
<xs:sequence> |
| |
|
|
270 |
<xs:element ref="rx:bcr_drug_barcode" /> |
| |
|
|
271 |
<xs:element ref="rx:bcr_drug_uuid" /> |
| |
|
|
272 |
<xs:element ref="rx:drug_category" /> |
| |
|
|
273 |
<xs:element ref="rx:total_dose" /> |
| |
|
|
274 |
<xs:element ref="rx:total_dose_units" /> |
| |
|
|
275 |
<xs:element ref="rx:number_cycles" /> |
| |
| |
|
-+ |
277 |
<xs:choice> |
| |
|
|
278 |
<xs:sequence> |
| |
|
|
279 |
<xs:element ref="rx:day_of_drug_therapy_start" /> |
| |
|
|
280 |
<xs:element ref="rx:month_of_drug_therapy_start" /> |
| |
|
|
281 |
<xs:element ref="rx:year_of_drug_therapy_start" /> |
| |
|
|
282 |
</xs:sequence> |
| |
|
|
283 |
<xs:element ref="rx:days_to_drug_therapy_start" /> |
| |
|
|
284 |
</xs:choice> |
| |
| |
|
-+ |
286 |
<xs:choice> |
| |
|
|
287 |
<xs:sequence> |
| |
|
|
288 |
<xs:element ref="rx:day_of_drug_therapy_end" /> |
| |
|
|
289 |
<xs:element ref="rx:month_of_drug_therapy_end" /> |
| |
|
|
290 |
<xs:element ref="rx:year_of_drug_therapy_end" /> |
| |
|
|
291 |
</xs:sequence> |
| |
|
|
292 |
<xs:element ref="rx:days_to_drug_therapy_end" /> |
| |
|
|
293 |
</xs:choice> |
| |
| |
|
-+ |
295 |
<xs:element ref="initial_course" /> |
| |
|
|
296 |
<xs:element ref="rx:drug_name" /> |
| |
|
|
297 |
<xs:element ref="shared:regimen_indication" /> |
| |
|
|
298 |
<xs:element ref="shared:regimen_indication_notes" /> |
| |
|
|
299 |
<xs:element ref="route_of_administration" /> |
| |
|
|
300 |
<xs:element ref="route_of_administration_notes" /> |
| |
|
|
301 |
<xs:element ref="rx:therapy_ongoing" /> |
| |
|
|
302 |
</xs:sequence> |
| |
|
|
303 |
</xs:complexType> |
| |
|
|
304 |
</xs:element> |
| |
| |
|
-+ |
306 |
<xs:element name="bcr_drug_barcode"> |
| |
|
|
307 |
<xs:complexType> |
| |
|
|
308 |
<xs:simpleContent> |
| |
|
|
309 |
<xs:extension base="xs:NCName"> |
| |
|
|
310 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
311 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.15" /> |
| |
|
|
312 |
</xs:extension> |
| |
|
|
313 |
</xs:simpleContent> |
| |
|
|
314 |
</xs:complexType> |
| |
|
|
315 |
</xs:element> |
| |
| |
|
-+ |
317 |
<xs:element name="number_cycles"> |
| |
|
|
318 |
<xs:complexType> |
| |
|
|
319 |
<xs:simpleContent> |
| |
|
|
320 |
<xs:extension base="xs:string"> |
| |
|
|
321 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
322 |
<xs:attribute name="cde" type="xs:string" default="62590" /> |
| |
|
|
323 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
324 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
325 |
</xs:extension> |
| |
|
|
326 |
</xs:simpleContent> |
| |
|
|
327 |
</xs:complexType> |
| |
|
|
328 |
</xs:element> |
| |
| |
|
-+ |
330 |
<xs:element name="drug_category"> |
| |
|
|
331 |
<xs:complexType> |
| |
|
|
332 |
<xs:simpleContent> |
| |
|
|
333 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
334 |
<xs:enumeration value="" /> |
| |
|
|
335 |
<xs:enumeration value="CHEMO" /> |
| |
|
|
336 |
<xs:enumeration value="HORMONAL" /> |
| |
|
|
337 |
<xs:enumeration value="IMMUNO" /> |
| |
|
|
338 |
<xs:enumeration value="TARGETED" /> |
| |
|
|
339 |
<xs:attribute name="cde" type="xs:string" default="729" /> |
| |
|
|
340 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
341 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
342 |
</xs:restriction> |
| |
|
|
343 |
</xs:simpleContent> |
| |
|
|
344 |
</xs:complexType> |
| |
|
|
345 |
</xs:element> |
| |
| |
|
-+ |
347 |
<xs:element name="initial_course"> |
| |
|
|
348 |
<xs:complexType> |
| |
|
|
349 |
<xs:simpleContent> |
| |
|
|
350 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
351 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
352 |
<xs:attribute name="cde" type="xs:string" default="2003586" /> |
| |
|
|
353 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
354 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
355 |
</xs:extension> |
| |
|
|
356 |
</xs:simpleContent> |
| |
|
|
357 |
</xs:complexType> |
| |
|
|
358 |
</xs:element> |
| |
| |
|
-+ |
360 |
<xs:element name="route_of_administration"> |
| |
|
|
361 |
<xs:complexType> |
| |
|
|
362 |
<xs:simpleContent> |
| |
|
|
363 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
364 |
<xs:enumeration value="" /> |
| |
|
|
365 |
<xs:enumeration value="ORAL" /> |
| |
|
|
366 |
<xs:enumeration value="INTRAVENOUS (IV)" /> |
| |
|
|
367 |
<xs:enumeration value="INTRATUMORAL" /> |
| |
|
|
368 |
<xs:enumeration value="INTRA-PERITONEAL (IP)" /> |
| |
|
|
369 |
<xs:enumeration value="IV AND IP" /> |
| |
|
|
370 |
<xs:enumeration value="OTHER: SPECIFY IN NOTES" /> |
| |
|
|
371 |
<xs:attribute name="cde" type="xs:string" default="2003586" /> |
| |
|
|
372 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
373 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
374 |
</xs:restriction> |
| |
|
|
375 |
</xs:simpleContent> |
| |
|
|
376 |
</xs:complexType> |
| |
|
|
377 |
</xs:element> |
| |
| |
|
-+ |
379 |
<xs:element name="route_of_administration_notes"> |
| |
|
|
380 |
<xs:complexType mixed="true"> |
| |
|
|
381 |
<xs:simpleContent> |
| |
|
|
382 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
383 |
<xs:attribute name="cde" type="xs:string" default="2190504" /> |
| |
|
|
384 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
385 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
386 |
</xs:restriction> |
| |
|
|
387 |
</xs:simpleContent> |
| |
|
|
388 |
</xs:complexType> |
| |
|
|
389 |
</xs:element> |
| |
| |
|
-+ |
391 |
<xs:element name="radiations"> |
| |
|
|
392 |
<xs:complexType> |
| |
|
|
393 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
| |
|
|
394 |
<xs:element ref="radiation" /> |
| |
|
|
395 |
</xs:sequence> |
| |
|
|
396 |
</xs:complexType> |
| |
|
|
397 |
</xs:element> |
| |
| |
|
-+ |
399 |
<xs:element name="radiation"> |
| |
|
|
400 |
<xs:complexType> |
| |
|
|
401 |
<xs:sequence> |
| |
|
|
402 |
<xs:element ref="rad:bcr_radiation_barcode" /> |
| |
|
|
403 |
<xs:element ref="rad:bcr_radiation_uuid"/> |
| |
| |
|
-+ |
405 |
<xs:choice> |
| |
|
|
406 |
<xs:sequence> |
| |
|
|
407 |
<xs:element ref="rad:day_of_radiation_therapy_start" /> |
| |
|
|
408 |
<xs:element ref="rad:month_of_radiation_therapy_start" /> |
| |
|
|
409 |
<xs:element ref="rad:year_of_radiation_therapy_start" /> |
| |
|
|
410 |
</xs:sequence> |
| |
|
|
411 |
<xs:element ref="rad:days_to_radiation_therapy_start" /> |
| |
|
|
412 |
</xs:choice> |
| |
| |
|
-+ |
414 |
<xs:choice> |
| |
|
|
415 |
<xs:sequence> |
| |
|
|
416 |
<xs:element ref="rad:day_of_radiation_therapy_end" /> |
| |
|
|
417 |
<xs:element ref="rad:month_of_radiation_therapy_end" /> |
| |
|
|
418 |
<xs:element ref="rad:year_of_radiation_therapy_end" /> |
| |
|
|
419 |
</xs:sequence> |
| |
|
|
420 |
<xs:element ref="rad:days_to_radiation_therapy_end" /> |
| |
|
|
421 |
</xs:choice> |
| |
| |
|
-+ |
423 |
<xs:element ref="rad:radiation_type" /> |
| |
|
|
424 |
<xs:element ref="rad:radiation_type_notes" /> |
| |
|
|
425 |
<xs:element ref="rad:radiation_dosage" /> |
| |
|
|
426 |
<xs:element ref="rad:units" /> |
| |
|
|
427 |
<xs:element ref="rad:numfractions" /> |
| |
|
|
428 |
<xs:element ref="anatomic_treatment_site" /> |
| |
|
|
429 |
<xs:element ref="shared:regimen_indication" /> |
| |
|
|
430 |
<xs:element ref="shared:regimen_indication_notes" /> |
| |
|
|
431 |
<xs:element ref="rad:radiation_treatment_ongoing" /> |
| |
|
|
432 |
</xs:sequence> |
| |
|
|
433 |
</xs:complexType> |
| |
|
|
434 |
</xs:element> |
| |
| |
|
-+ |
436 |
<xs:element name="bcr_radiation_barcode"> |
| |
|
|
437 |
<xs:complexType> |
| |
|
|
438 |
<xs:simpleContent> |
| |
|
|
439 |
<xs:extension base="xs:NCName"> |
| |
|
|
440 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
441 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.15" /> |
| |
|
|
442 |
</xs:extension> |
| |
|
|
443 |
</xs:simpleContent> |
| |
|
|
444 |
</xs:complexType> |
| |
|
|
445 |
</xs:element> |
| |
| |
|
-+ |
447 |
<xs:element name="radiation_treatment_ongoing" nillable="true"> |
| |
|
|
448 |
<xs:complexType> |
| |
|
|
449 |
<xs:simpleContent> |
| |
|
|
450 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
451 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
452 |
<xs:attribute name="cde" type="xs:string" default="2842745" /> |
| |
|
|
453 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
454 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
455 |
</xs:extension> |
| |
|
|
456 |
</xs:simpleContent> |
| |
|
|
457 |
</xs:complexType> |
| |
|
|
458 |
</xs:element> |
| |
| |
|
-+ |
460 |
<xs:element name="anatomic_treatment_site"> |
| |
|
|
461 |
<xs:complexType> |
| |
|
|
462 |
<xs:simpleContent> |
| |
|
|
463 |
<xs:extension base="xs:string"> |
| |
|
|
464 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
465 |
<xs:attribute name="cde" type="xs:string" default="2793522" /> |
| |
|
|
466 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
467 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
468 |
</xs:extension> |
| |
|
|
469 |
</xs:simpleContent> |
| |
|
|
470 |
</xs:complexType> |
| |
|
|
471 |
</xs:element> |
| |
| |
|
-+ |
473 |
<xs:element name="examinations"> |
| |
|
|
474 |
<xs:complexType> |
| |
|
|
475 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
| |
|
|
476 |
<xs:element ref="examination" /> |
| |
|
|
477 |
</xs:sequence> |
| |
|
|
478 |
</xs:complexType> |
| |
|
|
479 |
</xs:element> |
| |
| |
|
-+ |
481 |
<xs:element name="examination"> |
| |
|
|
482 |
<xs:complexType> |
| |
|
|
483 |
<xs:sequence> |
| |
|
|
484 |
<xs:element ref="bcr_examination_barcode" /> |
| |
|
|
485 |
<xs:element ref="karnofsky_performance_score" /> |
| |
|
|
486 |
<xs:element ref="eastern_cancer_oncology_group" /> |
| |
|
|
487 |
<xs:element ref="progression_status" /> |
| |
|
|
488 |
<xs:element ref="shared:performance_status_scale_timing" /> |
| |
|
|
489 |
<xs:element ref="shared:progression_determined_by" /> |
| |
|
|
490 |
<xs:element ref="shared:progression_determined_by_notes" /> |
| |
|
|
491 |
</xs:sequence> |
| |
|
|
492 |
</xs:complexType> |
| |
|
|
493 |
</xs:element> |
| |
| |
|
-+ |
495 |
<xs:element name="bcr_examination_barcode"> |
| |
|
|
496 |
<xs:complexType> |
| |
|
|
497 |
<xs:simpleContent> |
| |
|
|
498 |
<xs:extension base="xs:NCName"> |
| |
|
|
499 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
500 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.15" /> |
| |
|
|
501 |
</xs:extension> |
| |
|
|
502 |
</xs:simpleContent> |
| |
|
|
503 |
</xs:complexType> |
| |
|
|
504 |
</xs:element> |
| |
| |
|
-+ |
506 |
<xs:element name="karnofsky_performance_score"> |
| |
|
|
507 |
<xs:complexType> |
| |
|
|
508 |
<xs:simpleContent> |
| |
|
|
509 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
510 |
<xs:enumeration value="" /> |
| |
|
|
511 |
<xs:enumeration value="0" /> |
| |
|
|
512 |
<xs:enumeration value="10" /> |
| |
|
|
513 |
<xs:enumeration value="20" /> |
| |
|
|
514 |
<xs:enumeration value="30" /> |
| |
|
|
515 |
<xs:enumeration value="40" /> |
| |
|
|
516 |
<xs:enumeration value="50" /> |
| |
|
|
517 |
<xs:enumeration value="60" /> |
| |
|
|
518 |
<xs:enumeration value="70" /> |
| |
|
|
519 |
<xs:enumeration value="80" /> |
| |
|
|
520 |
<xs:enumeration value="90" /> |
| |
|
|
521 |
<xs:enumeration value="100" /> |
| |
|
|
522 |
<xs:attribute name="cde" type="xs:string" default="2003853" /> |
| |
|
|
523 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
524 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
525 |
</xs:restriction> |
| |
|
|
526 |
</xs:simpleContent> |
| |
|
|
527 |
</xs:complexType> |
| |
|
|
528 |
</xs:element> |
| |
| |
|
-+ |
530 |
<xs:element name="eastern_cancer_oncology_group"> |
| |
|
|
531 |
<xs:complexType> |
| |
|
|
532 |
<xs:simpleContent> |
| |
|
|
533 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
534 |
<xs:enumeration value="" /> |
| |
|
|
535 |
<xs:enumeration value="0" /> |
| |
|
|
536 |
<xs:enumeration value="1" /> |
| |
|
|
537 |
<xs:enumeration value="2" /> |
| |
|
|
538 |
<xs:enumeration value="3" /> |
| |
|
|
539 |
<xs:enumeration value="4" /> |
| |
|
|
540 |
<xs:enumeration value="5" /> |
| |
|
|
541 |
<xs:attribute name="cde" type="xs:string" default="88" /> |
| |
|
|
542 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
543 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
544 |
</xs:restriction> |
| |
|
|
545 |
</xs:simpleContent> |
| |
|
|
546 |
</xs:complexType> |
| |
|
|
547 |
</xs:element> |
| |
| |
|
-+ |
549 |
<xs:element name="progression_status"> |
| |
|
|
550 |
<xs:complexType> |
| |
|
|
551 |
<xs:simpleContent> |
| |
|
|
552 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
553 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
554 |
<xs:attribute name="cde" type="xs:string" default="2673787" /> |
| |
|
|
555 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
556 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
557 |
</xs:extension> |
| |
|
|
558 |
</xs:simpleContent> |
| |
|
|
559 |
</xs:complexType> |
| |
|
|
560 |
</xs:element> |
| |
| |
|
-+ |
562 |
<xs:element name="performance_status_scale_timing"> |
| |
|
|
563 |
<xs:complexType> |
| |
|
|
564 |
<xs:simpleContent> |
| |
|
|
565 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
566 |
<xs:enumeration value="" /> |
| |
|
|
567 |
<xs:enumeration value="PREOPERATIVE" /> |
| |
|
|
568 |
<xs:enumeration value="PRE-ADJUVANT THERAPY" /> |
| |
|
|
569 |
<xs:enumeration value="POST-ADJUVANT THERAPY" /> |
| |
|
|
570 |
<xs:enumeration value="OTHER" /> |
| |
|
|
571 |
<xs:attribute name="cde" type="xs:string" default="2792763" /> |
| |
|
|
572 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
573 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
574 |
</xs:restriction> |
| |
|
|
575 |
</xs:simpleContent> |
| |
|
|
576 |
</xs:complexType> |
| |
|
|
577 |
</xs:element> |
| |
| |
|
-+ |
579 |
<xs:element name="progression_determined_by"> |
| |
|
|
580 |
<xs:complexType> |
| |
|
|
581 |
<xs:simpleContent> |
| |
|
|
582 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
583 |
<xs:enumeration value="" /> |
| |
|
|
584 |
<xs:enumeration value="LABORATORY" /> |
| |
|
|
585 |
<xs:enumeration value="PATHOLOGY" /> |
| |
|
|
586 |
<xs:enumeration value="RADIATION" /> |
| |
|
|
587 |
<xs:enumeration value="PHYSICAL EXAMINATION" /> |
| |
|
|
588 |
<xs:enumeration value="IMAGING STUDY" /> |
| |
|
|
589 |
<xs:enumeration value="MOLECULAR MARKER(S)" /> |
| |
|
|
590 |
<xs:enumeration value="FIRST SEEN AT FURTHER SURGERY" /> |
| |
|
|
591 |
<xs:enumeration value="OTHER METHOD: SPECIFY IN NOTES" /> |
| |
|
|
592 |
<xs:attribute name="cde" type="xs:string" default="2786205" /> |
| |
|
|
593 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
594 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
595 |
</xs:restriction> |
| |
|
|
596 |
</xs:simpleContent> |
| |
|
|
597 |
</xs:complexType> |
| |
|
|
598 |
</xs:element> |
| |
| |
|
-+ |
600 |
<xs:element name="progression_determined_by_notes"> |
| |
|
|
601 |
<xs:complexType mixed="true"> |
| |
|
|
602 |
<xs:simpleContent> |
| |
|
|
603 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
604 |
<xs:attribute name="cde" type="xs:string" default="2786210" /> |
| |
|
|
605 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
606 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
607 |
</xs:restriction> |
| |
|
|
608 |
</xs:simpleContent> |
| |
|
|
609 |
</xs:complexType> |
| |
|
|
610 |
</xs:element> |
| |
| |
|
-+ |
612 |
<xs:element name="surgeries"> |
| |
|
|
613 |
<xs:complexType> |
| |
|
|
614 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
| |
|
|
615 |
<xs:element ref="surgery" /> |
| |
|
|
616 |
</xs:sequence> |
| |
|
|
617 |
</xs:complexType> |
| |
|
|
618 |
</xs:element> |
| |
| |
|
-+ |
620 |
<xs:element name="surgery"> |
| |
|
|
621 |
<xs:complexType> |
| |
|
|
622 |
<xs:sequence> |
| |
|
|
623 |
<xs:element ref="bcr_surgery_barcode" /> |
| |
| |
|
-+ |
625 |
<xs:choice> |
| |
|
|
626 |
<xs:sequence> |
| |
|
|
627 |
<xs:element ref="day_of_procedure" /> |
| |
|
|
628 |
<xs:element ref="month_of_procedure" /> |
| |
|
|
629 |
<xs:element ref="year_of_procedure" /> |
| |
|
|
630 |
</xs:sequence> |
| |
|
|
631 |
<xs:element ref="days_to_procedure" /> |
| |
|
|
632 |
</xs:choice> |
| |
| |
|
-+ |
634 |
<xs:element ref="procedure_type" /> |
| |
|
|
635 |
</xs:sequence> |
| |
|
|
636 |
</xs:complexType> |
| |
|
|
637 |
</xs:element> |
| |
| |
|
-+ |
639 |
<xs:element name="bcr_surgery_barcode"> |
| |
|
|
640 |
<xs:complexType> |
| |
|
|
641 |
<xs:simpleContent> |
| |
|
|
642 |
<xs:extension base="xs:NCName"> |
| |
|
|
643 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
644 |
<xs:attribute name="cde" type="xs:string" default="2003586" /> |
| |
|
|
645 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
646 |
</xs:extension> |
| |
|
|
647 |
</xs:simpleContent> |
| |
|
|
648 |
</xs:complexType> |
| |
|
|
649 |
</xs:element> |
| |
| |
|
-+ |
651 |
<xs:element name="day_of_procedure"> |
| |
|
|
652 |
<xs:complexType mixed="true"> |
| |
|
|
653 |
<xs:simpleContent> |
| |
|
|
654 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
655 |
<xs:attribute name="cde" type="xs:string" default="2896965" /> |
| |
|
|
656 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
657 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
658 |
</xs:restriction> |
| |
|
|
659 |
</xs:simpleContent> |
| |
|
|
660 |
</xs:complexType> |
| |
|
|
661 |
</xs:element> |
| |
| |
|
-+ |
663 |
<xs:element name="month_of_procedure"> |
| |
|
|
664 |
<xs:complexType mixed="true"> |
| |
|
|
665 |
<xs:simpleContent> |
| |
|
|
666 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
667 |
<xs:attribute name="cde" type="xs:string" default="2896963" /> |
| |
|
|
668 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
669 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
670 |
</xs:restriction> |
| |
|
|
671 |
</xs:simpleContent> |
| |
|
|
672 |
</xs:complexType> |
| |
|
|
673 |
</xs:element> |
| |
| |
|
-+ |
675 |
<xs:element name="year_of_procedure"> |
| |
|
|
676 |
<xs:complexType mixed="true"> |
| |
|
|
677 |
<xs:simpleContent> |
| |
|
|
678 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
679 |
<xs:attribute name="cde" type="xs:string" default="2896985" /> |
| |
|
|
680 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
681 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
682 |
</xs:restriction> |
| |
|
|
683 |
</xs:simpleContent> |
| |
|
|
684 |
</xs:complexType> |
| |
|
|
685 |
</xs:element> |
| |
| |
|
-+ |
687 |
<xs:element name="procedure_type"> |
| |
|
|
688 |
<xs:complexType mixed="true"> |
| |
|
|
689 |
<xs:simpleContent> |
| |
|
|
690 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
691 |
<xs:attribute name="cde" type="xs:string" default="2199761" /> |
| |
|
|
692 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
693 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
694 |
</xs:restriction> |
| |
|
|
695 |
</xs:simpleContent> |
| |
|
|
696 |
</xs:complexType> |
| |
|
|
697 |
</xs:element> |
| |
| |
|
-+ |
699 |
<xs:element name="days_to_drug_treatment_start"> |
| |
|
|
700 |
<xs:complexType mixed="true"> |
| |
|
|
701 |
<xs:simpleContent> |
| |
|
|
702 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
703 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
704 |
<xs:attribute name="xsd_ver" type="xs:string" default="" /> |
| |
|
|
705 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
706 |
</xs:restriction> |
| |
|
|
707 |
</xs:simpleContent> |
| |
|
|
708 |
</xs:complexType> |
| |
|
|
709 |
</xs:element> |
| |
| |
|
-+ |
711 |
<xs:element name="days_to_drug_treatment_end"> |
| |
|
|
712 |
<xs:complexType mixed="true"> |
| |
|
|
713 |
<xs:simpleContent> |
| |
|
|
714 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
715 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
716 |
<xs:attribute name="xsd_ver" type="xs:string" default="" /> |
| |
|
|
717 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
718 |
</xs:restriction> |
| |
|
|
719 |
</xs:simpleContent> |
| |
|
|
720 |
</xs:complexType> |
| |
|
|
721 |
</xs:element> |
| |
| |
|
-+ |
723 |
<xs:element name="days_to_radiation_treatment_start"> |
| |
|
|
724 |
<xs:complexType mixed="true"> |
| |
|
|
725 |
<xs:simpleContent> |
| |
|
|
726 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
727 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
728 |
<xs:attribute name="xsd_ver" type="xs:string" default="" /> |
| |
|
|
729 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
730 |
</xs:restriction> |
| |
|
|
731 |
</xs:simpleContent> |
| |
|
|
732 |
</xs:complexType> |
| |
|
|
733 |
</xs:element> |
| |
| |
|
-+ |
735 |
<xs:element name="days_to_radiation_treatment_end"> |
| |
|
|
736 |
<xs:complexType mixed="true"> |
| |
|
|
737 |
<xs:simpleContent> |
| |
|
|
738 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
739 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
740 |
<xs:attribute name="xsd_ver" type="xs:string" default="" /> |
| |
|
|
741 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
742 |
</xs:restriction> |
| |
|
|
743 |
</xs:simpleContent> |
| |
|
|
744 |
</xs:complexType> |
| |
|
|
745 |
</xs:element> |
| |
| |
|
-+ |
747 |
<xs:element name="days_to_procedure"> |
| |
|
|
748 |
<xs:complexType mixed="true"> |
| |
|
|
749 |
<xs:simpleContent> |
| |
|
|
750 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
751 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
752 |
<xs:attribute name="xsd_ver" type="xs:string" default="" /> |
| |
|
|
753 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
754 |
</xs:restriction> |
| |
|
|
755 |
</xs:simpleContent> |
| |
|
|
756 |
</xs:complexType> |
| |
|
|
757 |
</xs:element> |
| 4 |
<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" xmlns:kirc_kirp_shared="http://tcga.nci/bcr/xml/clinical/shared/kirc_kirp/2.5" xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" xmlns:kirc_shared="http://tcga.nci/bcr/xml/clinical/kirc/shared/2.5" xmlns:follow_up_v1.0="http://tcga.nci/bcr/xml/clinical/kirc/followup/2.5/1.0" xmlns="http://tcga.nci/bcr/xml/clinical/kirc/2.5" xmlns:jaxb="http://java.sun.com/xml/ns/jaxb" targetNamespace="http://tcga.nci/bcr/xml/clinical/kirc/2.5" elementFormDefault="qualified" version="2.5.0" jaxb:version="1.0"> |
<> |
3 |
|
| |
|
|
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
|
|
5 |
xmlns:xs="http://www.w3.org/2001/XMLSchema" |
| |
|
|
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| |
|
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| |
|
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| |
|
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| |
|
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| |
|
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/kirc/2.4" |
| |
|
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/kirc/2.4" |
| |
|
|
13 |
xmlns:jaxb="http://java.sun.com/xml/ns/jaxb" jaxb:version="1.0"> |
| |
| 16 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd"/> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 17 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd"/> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 18 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd"/> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 19 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd"/> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 20 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd"/> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 21 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd"/> |
|
33 |
|
| 22 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/kirc/followup/2.5/1.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/kirc/followup/2.5/TCGA_BCR.KIRC_Clinical_FollowUp_v1.0.xsd"/> |
|
|
|
| 23 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/kirc_kirp/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_KIRC_KIRP_Elements.xsd"/> |
|
|
|
| |
| 30 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 37 |
<xs:element ref="kirc_kirp_shared:histological_type"/> |
<> |
49 |
<xs:element ref="histological_type" /> |
| |
| 106 |
<xs:element ref="kirc_kirp_shared:tumor_stage"/> |
<> |
135 |
<xs:element ref="laterality" /> |
| 107 |
<xs:element ref="kirc_kirp_shared:primary_tumor_pathologic_spread"/> |
|
136 |
<xs:element ref="lactate_dehydrogenase_result" /> |
| 108 |
<xs:element ref="kirc_kirp_shared:lymphnode_pathologic_spread"/> |
|
137 |
<xs:element ref="serum_calcium_result" /> |
| 109 |
<xs:element ref="kirc_kirp_shared:distant_metastasis_pathologic_spread"/> |
|
|
|
| 110 |
<xs:element ref="kirc_kirp_shared:laterality"/> |
|
138 |
<xs:element ref="hemoglobin_result" /> |
| 111 |
<xs:element ref="shared:lactate_dehydrogenase_result"/> |
|
139 |
<xs:element ref="platelet_qualitative_result" /> |
| 112 |
<xs:element ref="kirc_kirp_shared:serum_calcium_result"/> |
|
140 |
<xs:element ref="white_cell_count_result" /> |
| 113 |
<xs:element ref="kirc_kirp_shared:hemoglobin_result"/> |
|
141 |
<xs:element ref="erythrocyte_sedimentation_rate_result" /> |
| 114 |
<xs:element ref="kirc_kirp_shared:platelet_qualitative_result"/> |
|
142 |
<xs:element ref="number_of_lymphnodes_examined" /> |
| 115 |
<xs:element ref="kirc_kirp_shared:white_cell_count_result"/> |
|
143 |
<xs:element ref="number_of_lymphnodes_positive" /> |
| 116 |
<xs:element ref="kirc_kirp_shared:erythrocyte_sedimentation_rate_result"/> |
|
144 |
<xs:element ref="primary_tumor_pathologic_spread" /> |
| 117 |
<xs:element ref="shared:lymph_node_examined_count"/> |
|
145 |
<xs:element ref="lymphnode_pathologic_spread" /> |
| 118 |
<xs:element ref="kirc_kirp_shared:number_of_lymphnodes_positive"/> |
|
146 |
<xs:element ref="distant_metastasis_pathologic_spread" /> |
| 119 |
<xs:element ref="shared:karnofsky_performance_score"/> |
|
147 |
<xs:element ref="karnofsky_performance_score" /> |
| 120 |
<xs:element ref="shared:eastern_cancer_oncology_group"/> |
|
148 |
<xs:element ref="eastern_cancer_oncology_group" /> |
| 121 |
<xs:element ref="shared:primary_lymph_node_presentation_assessment"/> |
|
149 |
<xs:element ref="lymphnodes_examined_prior_presentation" /> |
| 122 |
<xs:element ref="shared:neoplasm_histologic_grade"/> |
|
150 |
<xs:element ref="tumor_grade" /> |
| |
|
|
151 |
<xs:element ref="tumor_stage" /> |
| |
| |
|
<> |
154 |
</xs:sequence> |
| |
|
|
155 |
</xs:complexType> |
| 125 |
<xs:element ref="clinical_cqcf"/> |
|
156 |
</xs:element> |
| |
| 126 |
<xs:element name="follow_ups"> |
<> |
158 |
<xs:element name="histological_type" nillable="true"> |
| |
|
|
159 |
<xs:complexType mixed="true"> |
| 127 |
<xs:annotation> |
|
160 |
<xs:simpleContent> |
| 128 |
<xs:documentation>We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
161 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
162 |
<xs:attribute name="cde" type="xs:string" default="3081934" /> |
| |
|
|
163 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
164 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
165 |
</xs:restriction> |
| 129 |
</xs:annotation> |
|
166 |
</xs:simpleContent> |
| |
|
|
167 |
</xs:complexType> |
| |
|
|
168 |
</xs:element> |
| |
| |
|
-+ |
170 |
<xs:element name="primary_therapy_outcome_success" nillable="true"> |
| |
| |
|
<> |
172 |
<xs:simpleContent> |
| |
|
|
173 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
174 |
<xs:enumeration value="" /> |
| |
|
|
175 |
<xs:enumeration value="PROGRESSIVE DISEASE" /> |
| |
|
|
176 |
<xs:enumeration value="STABLE DISEASE" /> |
| |
|
|
177 |
<xs:enumeration value="PARTIAL RESPONSE" /> |
| |
|
|
178 |
<xs:enumeration value="COMPLETE RESPONSE" /> |
| |
|
|
179 |
<xs:attribute name="cde" type="xs:string" default="2786727" /> |
| |
|
|
180 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
181 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
182 |
</xs:restriction> |
| |
|
|
183 |
</xs:simpleContent> |
| |
|
|
184 |
</xs:complexType> |
| 131 |
<xs:sequence> |
|
185 |
</xs:element> |
| |
| 132 |
<xs:element ref="follow_up_v1.0:follow_up_v1.0" minOccurs="0" maxOccurs="unbounded"/> |
<> |
187 |
<xs:element name="karnofsky_performance_score" nillable="true"> |
| |
|
|
188 |
<xs:complexType> |
| |
|
|
189 |
<xs:simpleContent> |
| |
|
|
190 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
191 |
<xs:enumeration value="" /> |
| |
|
|
192 |
<xs:enumeration value="0" /> |
| |
|
|
193 |
<xs:enumeration value="10" /> |
| |
|
|
194 |
<xs:enumeration value="20" /> |
| |
|
|
195 |
<xs:enumeration value="30" /> |
| |
|
|
196 |
<xs:enumeration value="40" /> |
| |
|
|
197 |
<xs:enumeration value="50" /> |
| |
|
|
198 |
<xs:enumeration value="60" /> |
| |
|
|
199 |
<xs:enumeration value="70" /> |
| |
|
|
200 |
<xs:enumeration value="80" /> |
| |
|
|
201 |
<xs:enumeration value="90" /> |
| |
|
|
202 |
<xs:enumeration value="100" /> |
| |
|
|
203 |
<xs:attribute name="cde" type="xs:string" default="2003853" /> |
| |
|
|
204 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
205 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| 133 |
</xs:sequence> |
|
206 |
</xs:restriction> |
| |
|
|
207 |
</xs:simpleContent> |
| |
| |
|
<> |
211 |
<xs:element name="eastern_cancer_oncology_group"> |
| |
|
|
212 |
<xs:complexType> |
| |
|
|
213 |
<xs:simpleContent> |
| |
|
|
214 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
215 |
<xs:enumeration value="" /> |
| |
|
|
216 |
<xs:enumeration value="0" /> |
| |
|
|
217 |
<xs:enumeration value="1" /> |
| |
|
|
218 |
<xs:enumeration value="2" /> |
| |
|
|
219 |
<xs:enumeration value="3" /> |
| |
|
|
220 |
<xs:enumeration value="4" /> |
| |
|
|
221 |
<xs:attribute name="cde" type="xs:string" default="88" /> |
| |
|
|
222 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
223 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
224 |
</xs:restriction> |
| |
|
|
225 |
</xs:simpleContent> |
| |
|
|
226 |
</xs:complexType> |
| 136 |
</xs:sequence> |
|
227 |
</xs:element> |
| |
| |
|
-+ |
229 |
<xs:element name="primary_tumor_pathologic_spread" nillable="true"> |
| |
|
|
230 |
<xs:complexType> |
| |
|
|
231 |
<xs:simpleContent> |
| |
|
|
232 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
233 |
<xs:enumeration value="" /> |
| |
|
|
234 |
<xs:enumeration value="TX" /> |
| |
|
|
235 |
<xs:enumeration value="T0" /> |
| |
|
|
236 |
<xs:enumeration value="T1" /> |
| |
|
|
237 |
<xs:enumeration value="T1a" /> |
| |
|
|
238 |
<xs:enumeration value="T1b" /> |
| |
|
|
239 |
<xs:enumeration value="T2" /> |
| |
|
|
240 |
<xs:enumeration value="T2a" /> |
| |
|
|
241 |
<xs:enumeration value="T2b" /> |
| |
|
|
242 |
<xs:enumeration value="T3" /> |
| |
|
|
243 |
<xs:enumeration value="T3a" /> |
| |
|
|
244 |
<xs:enumeration value="T3b" /> |
| |
|
|
245 |
<xs:enumeration value="T3c" /> |
| |
|
|
246 |
<xs:enumeration value="T4" /> |
| |
|
|
247 |
<xs:enumeration value="T4a" /> |
| |
|
|
248 |
<xs:enumeration value="T4b" /> |
| |
|
|
249 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
250 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
251 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
252 |
</xs:restriction> |
| |
|
|
253 |
</xs:simpleContent> |
| |
| |
|
<> |
257 |
<xs:element name="lymphnode_pathologic_spread" nillable="true"> |
| |
|
|
258 |
<xs:complexType> |
| |
|
|
259 |
<xs:simpleContent> |
| |
|
|
260 |
<xs:restriction base="utility:clinical_res_attributes"> |
| 139 |
<xs:element name="clinical_cqcf"> |
|
261 |
<xs:enumeration value="" /> |
| |
|
|
262 |
<xs:enumeration value="NX" /> |
| |
|
|
263 |
<xs:enumeration value="N0" /> |
| |
|
|
264 |
<xs:enumeration value="N1" /> |
| |
|
|
265 |
<xs:attribute name="cde" type="xs:string" default="3065858" /> |
| |
|
|
266 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
267 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
268 |
</xs:restriction> |
| |
|
|
269 |
</xs:simpleContent> |
| |
|
|
270 |
</xs:complexType> |
| |
|
|
271 |
</xs:element> |
| |
| |
|
-+ |
273 |
<xs:element name="distant_metastasis_pathologic_spread" nillable="true"> |
| |
| |
|
<> |
275 |
<xs:simpleContent> |
| |
|
|
276 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
277 |
<xs:enumeration value="" /> |
| |
|
|
278 |
<xs:enumeration value="M0" /> |
| |
|
|
279 |
<xs:enumeration value="M1" /> |
| |
|
|
280 |
<xs:enumeration value="MX" /> |
| |
|
|
281 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
282 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
283 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
284 |
</xs:restriction> |
| |
|
|
285 |
</xs:simpleContent> |
| |
|
|
286 |
</xs:complexType> |
| 141 |
<xs:sequence> |
|
287 |
</xs:element> |
| |
| |
|
<> |
289 |
<xs:element name="lymphnodes_examined_prior_presentation"> |
| |
|
|
290 |
<xs:complexType mixed="true"> |
| |
|
|
291 |
<xs:simpleContent> |
| 142 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
|
292 |
<xs:extension base="utility:yes_or_no"> |
| 143 |
<xs:element ref="cqcf:history_of_prior_malignancy"/> |
|
293 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
294 |
<xs:attribute name="cde" type="xs:string" default="2200396" /> |
| 144 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
295 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
296 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
297 |
</xs:extension> |
| |
|
|
298 |
</xs:simpleContent> |
| |
|
|
299 |
</xs:complexType> |
| |
|
|
300 |
</xs:element> |
| |
| |
|
<> |
302 |
<xs:element name="number_of_lymphnodes_examined" nillable="true"> |
| |
|
|
303 |
<xs:complexType mixed="true"> |
| |
|
|
304 |
<xs:simpleContent> |
| 145 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
305 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
306 |
<xs:attribute name="cde" type="xs:string" default="3" /> |
| |
|
|
307 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
308 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 146 |
<xs:choice> |
|
309 |
</xs:restriction> |
| |
|
|
310 |
</xs:simpleContent> |
| |
|
|
311 |
</xs:complexType> |
| |
|
|
312 |
</xs:element> |
| |
| |
|
<> |
314 |
<xs:element name="number_of_lymphnodes_positive" nillable="true"> |
| |
|
|
315 |
<xs:complexType mixed="true"> |
| |
|
|
316 |
<xs:simpleContent> |
| |
|
|
317 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
318 |
<xs:attribute name="cde" type="xs:string" default="89" /> |
| |
|
|
319 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
320 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 147 |
<xs:choice> |
|
321 |
</xs:restriction> |
| |
|
|
322 |
</xs:simpleContent> |
| |
|
|
323 |
</xs:complexType> |
| 148 |
<xs:sequence> |
|
324 |
</xs:element> |
| |
| |
|
<> |
326 |
<xs:element name="erythrocyte_sedimentation_rate_result" nillable="true"> |
| |
|
|
327 |
<xs:complexType> |
| |
|
|
328 |
<xs:simpleContent> |
| |
|
|
329 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
330 |
<xs:enumeration value="" /> |
| 149 |
<xs:element ref="cqcf:day_of_consent"/> |
|
331 |
<xs:enumeration value="Elevated" /> |
| |
|
|
332 |
<xs:enumeration value="Normal" /> |
| |
|
|
333 |
<xs:attribute name="cde" type="xs:string" default="3104952" /> |
| |
|
|
334 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
335 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
336 |
</xs:restriction> |
| |
|
|
337 |
</xs:simpleContent> |
| |
|
|
338 |
</xs:complexType> |
| |
|
|
339 |
</xs:element> |
| |
| 150 |
<xs:element ref="cqcf:month_of_consent"/> |
<> |
341 |
<xs:element name="white_cell_count_result" nillable="true"> |
| |
|
|
342 |
<xs:complexType> |
| |
|
|
343 |
<xs:simpleContent> |
| |
|
|
344 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
345 |
<xs:enumeration value="" /> |
| 151 |
<xs:element ref="cqcf:year_of_consent"/> |
|
346 |
<xs:enumeration value="Elevated" /> |
| |
|
|
347 |
<xs:enumeration value="Normal" /> |
| |
|
|
348 |
<xs:enumeration value="Low" /> |
| |
|
|
349 |
<xs:attribute name="cde" type="xs:string" default="3104948" /> |
| |
|
|
350 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
351 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
352 |
</xs:restriction> |
| |
|
|
353 |
</xs:simpleContent> |
| |
|
|
354 |
</xs:complexType> |
| 152 |
</xs:sequence> |
|
355 |
</xs:element> |
| |
| |
|
<> |
357 |
<xs:element name="platelet_qualitative_result" nillable="true"> |
| |
|
|
358 |
<xs:complexType> |
| |
|
|
359 |
<xs:simpleContent> |
| |
|
|
360 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
361 |
<xs:enumeration value="" /> |
| 153 |
<xs:element ref="cqcf:days_to_consent"/> |
|
362 |
<xs:enumeration value="Elevated" /> |
| |
|
|
363 |
<xs:enumeration value="Normal" /> |
| |
|
|
364 |
<xs:enumeration value="Low" /> |
| |
|
|
365 |
<xs:attribute name="cde" type="xs:string" default="3104944" /> |
| |
|
|
366 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
367 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 154 |
</xs:choice> |
|
368 |
</xs:restriction> |
| |
|
|
369 |
</xs:simpleContent> |
| 155 |
<xs:choice> |
|
370 |
</xs:complexType> |
| 156 |
<xs:sequence> |
|
371 |
</xs:element> |
| |
| |
|
<> |
373 |
<xs:element name="hemoglobin_result" nillable="true"> |
| |
|
|
374 |
<xs:complexType> |
| |
|
|
375 |
<xs:simpleContent> |
| |
|
|
376 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
377 |
<xs:enumeration value="" /> |
| 157 |
<xs:element ref="shared:day_of_death"/> |
|
378 |
<xs:enumeration value="Elevated" /> |
| 158 |
<xs:element ref="shared:month_of_death"/> |
|
379 |
<xs:enumeration value="Normal" /> |
| |
|
|
380 |
<xs:enumeration value="Low" /> |
| |
|
|
381 |
<xs:attribute name="cde" type="xs:string" default="3113466" /> |
| 159 |
<xs:element ref="shared:year_of_death"/> |
|
382 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
383 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
384 |
</xs:restriction> |
| |
|
|
385 |
</xs:simpleContent> |
| |
|
|
386 |
</xs:complexType> |
| 160 |
</xs:sequence> |
|
387 |
</xs:element> |
| |
| |
|
<> |
389 |
<xs:element name="serum_calcium_result" nillable="true"> |
| |
|
|
390 |
<xs:complexType> |
| |
|
|
391 |
<xs:simpleContent> |
| |
|
|
392 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
393 |
<xs:enumeration value="" /> |
| 161 |
<xs:element ref="shared:days_to_death"/> |
|
394 |
<xs:enumeration value="Elevated" /> |
| |
|
|
395 |
<xs:enumeration value="Normal" /> |
| |
|
|
396 |
<xs:enumeration value="Low" /> |
| |
|
|
397 |
<xs:attribute name="cde" type="xs:string" default="3113470" /> |
| |
|
|
398 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
399 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 162 |
</xs:choice> |
|
400 |
</xs:restriction> |
| |
|
|
401 |
</xs:simpleContent> |
| 163 |
</xs:choice> |
|
402 |
</xs:complexType> |
| |
|
|
403 |
</xs:element> |
| |
| |
|
<> |
405 |
<xs:element name="lactate_dehydrogenase_result" nillable="true"> |
| |
|
|
406 |
<xs:complexType> |
| |
|
|
407 |
<xs:simpleContent> |
| |
|
|
408 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
409 |
<xs:enumeration value="" /> |
| |
|
|
410 |
<xs:enumeration value="Elevated" /> |
| |
|
|
411 |
<xs:enumeration value="Normal" /> |
| |
|
|
412 |
<xs:attribute name="cde" type="xs:string" default="3113468" /> |
| 164 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
|
413 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| 165 |
<xs:element ref="shared:prior_diagnosis"/> |
|
414 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
415 |
</xs:restriction> |
| |
|
|
416 |
</xs:simpleContent> |
| |
|
|
417 |
</xs:complexType> |
| |
|
|
418 |
</xs:element> |
| |
| 166 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
<> |
420 |
<xs:element name="laterality" nillable="true"> |
| |
|
|
421 |
<xs:complexType> |
| |
|
|
422 |
<xs:simpleContent> |
| 167 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
423 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
424 |
<xs:enumeration value="" /> |
| |
|
|
425 |
<xs:enumeration value="Right" /> |
| 168 |
<xs:element ref="cqcf:tumor_type"/> |
|
426 |
<xs:enumeration value="Left" /> |
| |
|
|
427 |
<xs:enumeration value="Bilateral" /> |
| 169 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
428 |
<xs:attribute name="cde" type="xs:string" default="827" /> |
| |
|
|
429 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
430 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
431 |
</xs:restriction> |
| |
|
|
432 |
</xs:simpleContent> |
| |
|
|
433 |
</xs:complexType> |
| |
|
|
434 |
</xs:element> |
| |
| 170 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
<> |
436 |
<xs:element name="tumor_grade" nillable="true"> |
| |
|
|
437 |
<xs:complexType> |
| |
|
|
438 |
<xs:simpleContent> |
| |
|
|
439 |
<xs:restriction base="utility:clinical_res_attributes"> |
| 171 |
<xs:element ref="cqcf:country"/> |
|
440 |
<xs:enumeration value="" /> |
| |
|
|
441 |
<xs:enumeration value="GX" /> |
| |
|
|
442 |
<xs:enumeration value="G1" /> |
| |
|
|
443 |
<xs:enumeration value="G2" /> |
| |
|
|
444 |
<xs:enumeration value="G3" /> |
| |
|
|
445 |
<xs:enumeration value="G4" /> |
| |
|
|
446 |
<xs:attribute name="cde" type="xs:string" default="2785839" /> |
| |
|
|
447 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
448 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
449 |
</xs:restriction> |
| |
|
|
450 |
</xs:simpleContent> |
| |
|
|
451 |
</xs:complexType> |
| 172 |
</xs:sequence> |
|
452 |
</xs:element> |
| |
| |
|
-+ |
454 |
<xs:element name="tumor_stage" nillable="true"> |
| |
|
|
455 |
<xs:complexType> |
| |
|
|
456 |
<xs:simpleContent> |
| |
|
|
457 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
458 |
<xs:enumeration value="" /> |
| |
|
|
459 |
<xs:enumeration value="Stage I" /> |
| |
|
|
460 |
<xs:enumeration value="Stage II" /> |
| |
|
|
461 |
<xs:enumeration value="Stage III" /> |
| |
|
|
462 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
463 |
<xs:attribute name="cde" type="xs:string" default="3065862" /> |
| |
|
|
464 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
465 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
466 |
</xs:restriction> |
| |
|
|
467 |
</xs:simpleContent> |
| 4 |
<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" xmlns:kirc_kirp_shared="http://tcga.nci/bcr/xml/clinical/shared/kirc_kirp/2.5" xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" xmlns:follow_up_v1.0="http://tcga.nci/bcr/xml/clinical/kirp/followup/2.5/1.0" xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" xmlns="http://tcga.nci/bcr/xml/clinical/kirp/2.5" xmlns:jaxb="http://java.sun.com/xml/ns/jaxb" targetNamespace="http://tcga.nci/bcr/xml/clinical/kirp/2.5" elementFormDefault="qualified" version="2.5.2" jaxb:version="1.0"> |
<> |
3 |
|
| |
|
|
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
|
|
5 |
xmlns:xs="http://www.w3.org/2001/XMLSchema" |
| |
|
|
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| |
|
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| |
|
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| |
|
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| |
|
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| |
|
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/kirp/2.4" |
| |
|
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/kirp/2.4" |
| |
|
|
13 |
xmlns:jaxb="http://java.sun.com/xml/ns/jaxb" jaxb:version="1.0"> |
| |
| 16 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd"/> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 17 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd"/> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 18 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd"/> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 19 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd"/> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 20 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd"/> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 21 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd"/> |
|
33 |
|
| 22 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/kirp/followup/2.5/1.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/kirp/followup/2.5/TCGA_BCR.KIRP_Clinical_FollowUp_v1.0.xsd"/> |
|
|
|
| 23 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/kirc_kirp/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_KIRC_KIRP_Elements.xsd"/> |
|
|
|
| |
| 30 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 37 |
<xs:element ref="kirc_kirp_shared:histological_type"/> |
<> |
49 |
<xs:element ref="histological_type" /> |
| |
| 106 |
<xs:element ref="kirc_kirp_shared:laterality"/> |
<> |
135 |
<xs:element ref="laterality" /> |
| 107 |
<xs:element ref="shared:lactate_dehydrogenase_result"/> |
|
136 |
<xs:element ref="lactate_dehydrogenase_result" /> |
| 108 |
<xs:element ref="kirc_kirp_shared:serum_calcium_result"/> |
|
137 |
<xs:element ref="serum_calcium_result" /> |
| 109 |
<xs:element ref="kirc_kirp_shared:hemoglobin_result"/> |
|
138 |
<xs:element ref="hemoglobin_result" /> |
| 110 |
<xs:element ref="kirc_kirp_shared:platelet_qualitative_result"/> |
|
139 |
<xs:element ref="platelet_qualitative_result" /> |
| 111 |
<xs:element ref="kirc_kirp_shared:white_cell_count_result"/> |
|
140 |
<xs:element ref="white_cell_count_result" /> |
| 112 |
<xs:element ref="kirc_kirp_shared:erythrocyte_sedimentation_rate_result"/> |
|
141 |
<xs:element ref="erythrocyte_sedimentation_rate_result" /> |
| 113 |
<xs:element ref="shared:lymph_node_examined_count"/> |
|
142 |
<xs:element ref="number_of_lymphnodes_examined" /> |
| 114 |
<xs:element ref="kirc_kirp_shared:number_of_lymphnodes_positive"/> |
|
143 |
<xs:element ref="number_of_lymphnodes_positive" /> |
| 115 |
<xs:element ref="kirc_kirp_shared:primary_tumor_pathologic_spread"/> |
|
144 |
<xs:element ref="primary_tumor_pathologic_spread" /> |
| 116 |
<xs:element ref="kirc_kirp_shared:lymphnode_pathologic_spread"/> |
|
145 |
<xs:element ref="lymphnode_pathologic_spread" /> |
| 117 |
<xs:element ref="kirc_kirp_shared:distant_metastasis_pathologic_spread"/> |
|
146 |
<xs:element ref="distant_metastasis_pathologic_spread" /> |
| 118 |
<xs:element ref="shared:karnofsky_performance_score"/> |
|
147 |
<xs:element ref="karnofsky_performance_score" /> |
| 119 |
<xs:element ref="shared:eastern_cancer_oncology_group"/> |
|
148 |
<xs:element ref="eastern_cancer_oncology_group" /> |
| 120 |
<xs:element ref="shared:primary_lymph_node_presentation_assessment"/> |
|
149 |
<xs:element ref="lymphnodes_examined_prior_presentation" /> |
| |
| 122 |
<xs:element ref="kirc_kirp_shared:tumor_stage"/> |
<> |
151 |
<xs:element ref="tumor_stage" /> |
| |
| |
|
<> |
154 |
</xs:sequence> |
| |
|
|
155 |
</xs:complexType> |
| 125 |
<xs:element ref="clinical_cqcf"/> |
|
156 |
</xs:element> |
| |
| 126 |
<xs:element name="follow_ups"> |
<> |
158 |
<xs:element name="histological_type" nillable="true"> |
| |
|
|
159 |
<xs:complexType mixed="true"> |
| 127 |
<xs:annotation> |
|
160 |
<xs:simpleContent> |
| 128 |
<xs:documentation>We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
161 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
162 |
<xs:attribute name="cde" type="xs:string" default="3081934" /> |
| |
|
|
163 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
164 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
165 |
</xs:restriction> |
| 129 |
</xs:annotation> |
|
166 |
</xs:simpleContent> |
| |
|
|
167 |
</xs:complexType> |
| |
|
|
168 |
</xs:element> |
| |
| |
|
-+ |
170 |
<xs:element name="primary_therapy_outcome_success" nillable="true"> |
| |
| 131 |
<xs:sequence> |
<> |
172 |
<xs:simpleContent> |
| |
|
|
173 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
174 |
<xs:enumeration value="" /> |
| |
|
|
175 |
<xs:enumeration value="PROGRESSIVE DISEASE" /> |
| |
|
|
176 |
<xs:enumeration value="STABLE DISEASE" /> |
| |
|
|
177 |
<xs:enumeration value="PARTIAL RESPONSE" /> |
| |
|
|
178 |
<xs:enumeration value="COMPLETE RESPONSE" /> |
| |
|
|
179 |
<xs:attribute name="cde" type="xs:string" default="2786727" /> |
| 132 |
<xs:element ref="follow_up_v1.0:follow_up_v1.0" minOccurs="0" maxOccurs="unbounded"/> |
|
180 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
181 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| 133 |
</xs:sequence> |
|
182 |
</xs:restriction> |
| |
|
|
183 |
</xs:simpleContent> |
| |
| |
|
<> |
187 |
<xs:element name="karnofsky_performance_score" nillable="true"> |
| |
|
|
188 |
<xs:complexType> |
| |
|
|
189 |
<xs:simpleContent> |
| |
|
|
190 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
191 |
<xs:enumeration value="" /> |
| |
|
|
192 |
<xs:enumeration value="0" /> |
| |
|
|
193 |
<xs:enumeration value="10" /> |
| |
|
|
194 |
<xs:enumeration value="20" /> |
| |
|
|
195 |
<xs:enumeration value="30" /> |
| |
|
|
196 |
<xs:enumeration value="40" /> |
| |
|
|
197 |
<xs:enumeration value="50" /> |
| |
|
|
198 |
<xs:enumeration value="60" /> |
| |
|
|
199 |
<xs:enumeration value="70" /> |
| |
|
|
200 |
<xs:enumeration value="80" /> |
| |
|
|
201 |
<xs:enumeration value="90" /> |
| |
|
|
202 |
<xs:enumeration value="100" /> |
| |
|
|
203 |
<xs:attribute name="cde" type="xs:string" default="2003853" /> |
| |
|
|
204 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
205 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| 136 |
</xs:sequence> |
|
206 |
</xs:restriction> |
| |
|
|
207 |
</xs:simpleContent> |
| |
| 139 |
<xs:element name="clinical_cqcf"> |
<> |
211 |
<xs:element name="eastern_cancer_oncology_group"> |
| |
| |
|
<> |
213 |
<xs:simpleContent> |
| |
|
|
214 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
215 |
<xs:enumeration value="" /> |
| |
|
|
216 |
<xs:enumeration value="0" /> |
| |
|
|
217 |
<xs:enumeration value="1" /> |
| |
|
|
218 |
<xs:enumeration value="2" /> |
| |
|
|
219 |
<xs:enumeration value="3" /> |
| |
|
|
220 |
<xs:enumeration value="4" /> |
| |
|
|
221 |
<xs:attribute name="cde" type="xs:string" default="88" /> |
| |
|
|
222 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
223 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
224 |
</xs:restriction> |
| |
|
|
225 |
</xs:simpleContent> |
| |
|
|
226 |
</xs:complexType> |
| 141 |
<xs:sequence> |
|
227 |
</xs:element> |
| |
| 142 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
<> |
229 |
<xs:element name="primary_tumor_pathologic_spread" nillable="true"> |
| |
|
|
230 |
<xs:complexType> |
| |
|
|
231 |
<xs:simpleContent> |
| 143 |
<xs:element ref="cqcf:history_of_prior_malignancy"/> |
|
232 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
233 |
<xs:enumeration value="" /> |
| |
|
|
234 |
<xs:enumeration value="TX" /> |
| |
|
|
235 |
<xs:enumeration value="T0" /> |
| |
|
|
236 |
<xs:enumeration value="T1" /> |
| |
|
|
237 |
<xs:enumeration value="T1a" /> |
| |
|
|
238 |
<xs:enumeration value="T1b" /> |
| |
|
|
239 |
<xs:enumeration value="T2" /> |
| |
|
|
240 |
<xs:enumeration value="T2a" /> |
| |
|
|
241 |
<xs:enumeration value="T2b" /> |
| |
|
|
242 |
<xs:enumeration value="T3" /> |
| |
|
|
243 |
<xs:enumeration value="T3a" /> |
| |
|
|
244 |
<xs:enumeration value="T3b" /> |
| |
|
|
245 |
<xs:enumeration value="T3c" /> |
| |
|
|
246 |
<xs:enumeration value="T4" /> |
| |
|
|
247 |
<xs:enumeration value="T4a" /> |
| |
|
|
248 |
<xs:enumeration value="T4b" /> |
| |
|
|
249 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| 144 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
250 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| 145 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
251 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 146 |
<xs:choice> |
|
252 |
</xs:restriction> |
| |
|
|
253 |
</xs:simpleContent> |
| |
|
|
254 |
</xs:complexType> |
| |
|
|
255 |
</xs:element> |
| |
| |
|
<> |
257 |
<xs:element name="lymphnode_pathologic_spread" nillable="true"> |
| |
|
|
258 |
<xs:complexType> |
| |
|
|
259 |
<xs:simpleContent> |
| |
|
|
260 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
261 |
<xs:enumeration value="" /> |
| |
|
|
262 |
<xs:enumeration value="NX" /> |
| |
|
|
263 |
<xs:enumeration value="N0" /> |
| |
|
|
264 |
<xs:enumeration value="N1" /> |
| |
|
|
265 |
<xs:attribute name="cde" type="xs:string" default="3065858" /> |
| |
|
|
266 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
267 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 147 |
<xs:choice> |
|
268 |
</xs:restriction> |
| |
|
|
269 |
</xs:simpleContent> |
| |
|
|
270 |
</xs:complexType> |
| 148 |
<xs:sequence> |
|
271 |
</xs:element> |
| |
| |
|
<> |
273 |
<xs:element name="distant_metastasis_pathologic_spread" nillable="true"> |
| |
|
|
274 |
<xs:complexType> |
| |
|
|
275 |
<xs:simpleContent> |
| |
|
|
276 |
<xs:restriction base="utility:clinical_res_attributes"> |
| 149 |
<xs:element ref="cqcf:day_of_consent"/> |
|
277 |
<xs:enumeration value="" /> |
| |
|
|
278 |
<xs:enumeration value="M0" /> |
| |
|
|
279 |
<xs:enumeration value="M1" /> |
| |
|
|
280 |
<xs:enumeration value="MX" /> |
| |
|
|
281 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
282 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
283 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
284 |
</xs:restriction> |
| |
|
|
285 |
</xs:simpleContent> |
| |
|
|
286 |
</xs:complexType> |
| |
|
|
287 |
</xs:element> |
| |
| 150 |
<xs:element ref="cqcf:month_of_consent"/> |
<> |
289 |
<xs:element name="lymphnodes_examined_prior_presentation"> |
| |
|
|
290 |
<xs:complexType mixed="true"> |
| |
|
|
291 |
<xs:simpleContent> |
| 151 |
<xs:element ref="cqcf:year_of_consent"/> |
|
292 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
293 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
294 |
<xs:attribute name="cde" type="xs:string" default="2200396" /> |
| |
|
|
295 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
296 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
297 |
</xs:extension> |
| |
|
|
298 |
</xs:simpleContent> |
| |
|
|
299 |
</xs:complexType> |
| 152 |
</xs:sequence> |
|
300 |
</xs:element> |
| |
| |
|
<> |
302 |
<xs:element name="number_of_lymphnodes_examined" nillable="true"> |
| |
|
|
303 |
<xs:complexType mixed="true"> |
| |
|
|
304 |
<xs:simpleContent> |
| |
|
|
305 |
<xs:restriction base="utility:clinical_res_attributes"> |
| 153 |
<xs:element ref="cqcf:days_to_consent"/> |
|
306 |
<xs:attribute name="cde" type="xs:string" default="3" /> |
| |
|
|
307 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
308 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 154 |
</xs:choice> |
|
309 |
</xs:restriction> |
| |
|
|
310 |
</xs:simpleContent> |
| |
|
|
311 |
</xs:complexType> |
| |
|
|
312 |
</xs:element> |
| |
| |
|
<> |
314 |
<xs:element name="number_of_lymphnodes_positive" nillable="true"> |
| |
|
|
315 |
<xs:complexType mixed="true"> |
| |
|
|
316 |
<xs:simpleContent> |
| |
|
|
317 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
318 |
<xs:attribute name="cde" type="xs:string" default="89" /> |
| |
|
|
319 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
320 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 155 |
<xs:choice> |
|
321 |
</xs:restriction> |
| |
|
|
322 |
</xs:simpleContent> |
| |
|
|
323 |
</xs:complexType> |
| 156 |
<xs:sequence> |
|
324 |
</xs:element> |
| |
| |
|
<> |
326 |
<xs:element name="erythrocyte_sedimentation_rate_result" nillable="true"> |
| |
|
|
327 |
<xs:complexType> |
| |
|
|
328 |
<xs:simpleContent> |
| |
|
|
329 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
330 |
<xs:enumeration value="" /> |
| 157 |
<xs:element ref="shared:day_of_death"/> |
|
331 |
<xs:enumeration value="Elevated" /> |
| 158 |
<xs:element ref="shared:month_of_death"/> |
|
332 |
<xs:enumeration value="Normal" /> |
| |
|
|
333 |
<xs:attribute name="cde" type="xs:string" default="3104952" /> |
| 159 |
<xs:element ref="shared:year_of_death"/> |
|
334 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
335 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
336 |
</xs:restriction> |
| |
|
|
337 |
</xs:simpleContent> |
| |
|
|
338 |
</xs:complexType> |
| 160 |
</xs:sequence> |
|
339 |
</xs:element> |
| |
| |
|
<> |
341 |
<xs:element name="white_cell_count_result" nillable="true"> |
| |
|
|
342 |
<xs:complexType> |
| |
|
|
343 |
<xs:simpleContent> |
| |
|
|
344 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
345 |
<xs:enumeration value="" /> |
| 161 |
<xs:element ref="shared:days_to_death"/> |
|
346 |
<xs:enumeration value="Elevated" /> |
| |
|
|
347 |
<xs:enumeration value="Normal" /> |
| |
|
|
348 |
<xs:enumeration value="Low" /> |
| |
|
|
349 |
<xs:attribute name="cde" type="xs:string" default="3104948" /> |
| |
|
|
350 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
351 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 162 |
</xs:choice> |
|
352 |
</xs:restriction> |
| |
|
|
353 |
</xs:simpleContent> |
| |
|
|
354 |
</xs:complexType> |
| |
|
|
355 |
</xs:element> |
| |
| |
|
<> |
357 |
<xs:element name="platelet_qualitative_result" nillable="true"> |
| |
|
|
358 |
<xs:complexType> |
| |
|
|
359 |
<xs:simpleContent> |
| |
|
|
360 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
361 |
<xs:enumeration value="" /> |
| |
|
|
362 |
<xs:enumeration value="Elevated" /> |
| |
|
|
363 |
<xs:enumeration value="Normal" /> |
| |
|
|
364 |
<xs:enumeration value="Low" /> |
| |
|
|
365 |
<xs:attribute name="cde" type="xs:string" default="3104944" /> |
| |
|
|
366 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
367 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 163 |
</xs:choice> |
|
368 |
</xs:restriction> |
| |
|
|
369 |
</xs:simpleContent> |
| |
|
|
370 |
</xs:complexType> |
| |
|
|
371 |
</xs:element> |
| |
| |
|
<> |
373 |
<xs:element name="hemoglobin_result" nillable="true"> |
| |
|
|
374 |
<xs:complexType> |
| |
|
|
375 |
<xs:simpleContent> |
| |
|
|
376 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
377 |
<xs:enumeration value="" /> |
| |
|
|
378 |
<xs:enumeration value="Elevated" /> |
| |
|
|
379 |
<xs:enumeration value="Normal" /> |
| |
|
|
380 |
<xs:enumeration value="Low" /> |
| |
|
|
381 |
<xs:attribute name="cde" type="xs:string" default="3113466" /> |
| 164 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
|
382 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| 165 |
<xs:element ref="shared:prior_diagnosis"/> |
|
383 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
384 |
</xs:restriction> |
| |
|
|
385 |
</xs:simpleContent> |
| |
|
|
386 |
</xs:complexType> |
| |
|
|
387 |
</xs:element> |
| |
| 166 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
<> |
389 |
<xs:element name="serum_calcium_result" nillable="true"> |
| |
|
|
390 |
<xs:complexType> |
| |
|
|
391 |
<xs:simpleContent> |
| 167 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
392 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
393 |
<xs:enumeration value="" /> |
| 168 |
<xs:element ref="cqcf:tumor_type"/> |
|
394 |
<xs:enumeration value="Elevated" /> |
| |
|
|
395 |
<xs:enumeration value="Normal" /> |
| |
|
|
396 |
<xs:enumeration value="Low" /> |
| |
|
|
397 |
<xs:attribute name="cde" type="xs:string" default="3113470" /> |
| |
|
|
398 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| 169 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
399 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
400 |
</xs:restriction> |
| |
|
|
401 |
</xs:simpleContent> |
| |
|
|
402 |
</xs:complexType> |
| |
|
|
403 |
</xs:element> |
| |
| 170 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
<> |
405 |
<xs:element name="lactate_dehydrogenase_result" nillable="true"> |
| |
|
|
406 |
<xs:complexType> |
| |
|
|
407 |
<xs:simpleContent> |
| |
|
|
408 |
<xs:restriction base="utility:clinical_res_attributes"> |
| 171 |
<xs:element ref="cqcf:country"/> |
|
409 |
<xs:enumeration value="" /> |
| |
|
|
410 |
<xs:enumeration value="Elevated" /> |
| |
|
|
411 |
<xs:enumeration value="Normal" /> |
| |
|
|
412 |
<xs:attribute name="cde" type="xs:string" default="3113468" /> |
| |
|
|
413 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
414 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
415 |
</xs:restriction> |
| |
|
|
416 |
</xs:simpleContent> |
| |
|
|
417 |
</xs:complexType> |
| 172 |
</xs:sequence> |
|
418 |
</xs:element> |
| |
| |
|
-+ |
420 |
<xs:element name="laterality" nillable="true"> |
| |
|
|
421 |
<xs:complexType> |
| |
|
|
422 |
<xs:simpleContent> |
| |
|
|
423 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
424 |
<xs:enumeration value="" /> |
| |
|
|
425 |
<xs:enumeration value="Right" /> |
| |
|
|
426 |
<xs:enumeration value="Left" /> |
| |
|
|
427 |
<xs:enumeration value="Bilateral" /> |
| |
|
|
428 |
<xs:attribute name="cde" type="xs:string" default="827" /> |
| |
|
|
429 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
430 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
431 |
</xs:restriction> |
| |
|
|
432 |
</xs:simpleContent> |
| |
| |
|
-+ |
451 |
<xs:element name="tumor_stage" nillable="true"> |
| |
|
|
452 |
<xs:complexType> |
| |
|
|
453 |
<xs:simpleContent> |
| |
|
|
454 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
455 |
<xs:enumeration value="" /> |
| |
|
|
456 |
<xs:enumeration value="Stage I" /> |
| |
|
|
457 |
<xs:enumeration value="Stage II" /> |
| |
|
|
458 |
<xs:enumeration value="Stage III" /> |
| |
|
|
459 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
460 |
<xs:attribute name="cde" type="xs:string" default="3065862" /> |
| |
|
|
461 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
462 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
463 |
</xs:restriction> |
| |
|
|
464 |
</xs:simpleContent> |
| |
|
|
465 |
</xs:complexType> |
| |
|
|
466 |
</xs:element> |
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 11 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 12 |
xmlns:follow_up_v1.0="http://tcga.nci/bcr/xml/clinical/lihc/followup/2.5/1.0" |
|
|
|
| 13 |
xmlns:follow_up_v2.0="http://tcga.nci/bcr/xml/clinical/lihc/followup/2.5/2.0" |
|
|
|
| 14 |
xmlns="http://tcga.nci/bcr/xml/clinical/lihc/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/lihc/2.4" |
| 15 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/lihc/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/lihc/2.4" |
| |
| 31 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/lihc/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/lihc/shared/2.5/TCGA_BCR.LIHC_Clinical_Shared_Datatypes.xsd" /> |
|
|
|
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/lihc/followup/2.5/1.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/lihc/followup/2.5/TCGA_BCR.LIHC_Clinical_FollowUp_v1.0.xsd" /> |
|
|
|
| 39 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/lihc/followup/2.5/2.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/lihc/followup/2.5/TCGA_BCR.LIHC_Clinical_FollowUp_v2.0.xsd" /> |
|
|
|
| |
| 48 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 55 |
<xs:element ref="shared:tissue_source_site" /> |
+- |
|
|
| 56 |
<xs:element ref="shared:patient_id" /> |
|
|
|
| 57 |
<xs:element ref="shared:bcr_patient_barcode" /> |
|
|
|
| 58 |
<xs:element ref="shared:bcr_patient_uuid" /> |
|
|
|
| 59 |
<xs:element ref="shared:informed_consent_verified" /> |
|
|
|
| 60 |
<xs:element ref="shared:icd_o_3_site" /> |
|
|
|
| 61 |
<xs:element ref="shared:icd_o_3_histology" /> |
|
|
|
| 62 |
<xs:element ref="shared:icd_10" /> |
|
|
|
| |
| 107 |
<xs:annotation> |
+- |
|
|
| 108 |
<xs:documentation xml:lang="en"> |
|
|
|
| 109 |
The Date for Last Known Alive was DEPRECATED. It |
|
|
|
| 110 |
was last placed on the TCGA Clinical Form 1.06. |
|
|
|
| 111 |
</xs:documentation> |
|
|
|
| 112 |
</xs:annotation> |
|
|
|
| |
| 139 |
<xs:element ref="histological_type" /> |
<> |
116 |
<xs:element ref="neoplasm_histologic_type_name" /> |
| |
| 153 |
<xs:element ref="shared:neoplasm_histologic_grade" /> |
<> |
130 |
<xs:element ref="neoplasm_histologic_grade" /> |
| 154 |
<xs:element ref="shared:residual_tumor" /> |
|
131 |
<xs:element ref="surgical_margin_resection_status" /> |
| 155 |
<xs:element ref="shared:ajcc_cancer_staging_handbook_edition" /> |
|
132 |
<xs:element ref="american_joint_committee_on_cancer_publication_version_type" /> |
| 156 |
<xs:element ref="shared:ajcc_tumor_stage_code" /> |
|
133 |
<xs:element ref="american_joint_committee_on_cancer_tumor_stage_code" /> |
| 157 |
<xs:element ref="shared:ajcc_neoplasm_disease_lymph_node_stage" /> |
|
134 |
<xs:element ref="neoplasm_disease_lymph_node_stage_american_joint_committee_on_cancer_code" /> |
| 158 |
<xs:element ref="shared:ajcc_cancer_metastasis_stage_code" /> |
|
135 |
<xs:element ref="american_joint_committee_on_cancer_metastasis_stage_code" /> |
| 159 |
<xs:element ref="shared:ajcc_neoplasm_disease_stage" /> |
|
136 |
<xs:element ref="neoplasm_disease_stage_american_joint_committee_on_cancer_code" /> |
| |
| 165 |
<xs:element ref="lab_procedure_platelet_result_specified_value" /> |
<> |
142 |
<xs:element ref="laboratory_procedure_platelet_result_specified_value" /> |
| |
| |
|
-+ |
159 |
<xs:element ref="performance_status_assessment_eastern_cooperative_oncology_group_scale" /> |
| |
| 182 |
<xs:element ref="shared:eastern_cancer_oncology_group" /> |
<> |
162 |
<xs:element ref="shared:bcr_patient_barcode" /> |
| |
|
|
163 |
<xs:element ref="shared:tissue_source_site" /> |
| |
|
|
164 |
<xs:element ref="shared:patient_id" /> |
| |
|
|
165 |
<xs:element ref="shared:bcr_patient_uuid" /> |
| |
|
|
166 |
<xs:element ref="shared:informed_consent_verified" /> |
| |
|
|
167 |
<xs:element ref="shared:icd_o_3_site" /> |
| |
|
|
168 |
<xs:element ref="shared:icd_o_3_histology" /> |
| |
|
|
169 |
<xs:element ref="shared:icd_10" /> |
| |
| 198 |
<xs:element ref="follow_ups" /> |
+- |
|
|
| |
| 201 |
<xs:element ref="clinical_cqcf" /> |
+- |
|
|
| 202 |
</xs:sequence> |
|
|
|
| 203 |
</xs:complexType> |
|
|
|
| 204 |
</xs:element> |
|
|
|
| |
| 206 |
<xs:element name="follow_ups"> |
+- |
|
|
| 207 |
<xs:annotation> |
|
|
|
| 208 |
<xs:documentation xml:lang="en"> |
|
|
|
| 209 |
We are using namespaces and version numbers to distinguish one version of followup from another. |
|
|
|
| 210 |
</xs:documentation> |
|
|
|
| 211 |
</xs:annotation> |
|
|
|
| 212 |
<xs:complexType> |
|
|
|
| 213 |
<xs:sequence> |
|
|
|
| 214 |
<xs:element ref="follow_up_v1.0:follow_up_v1.0" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| 215 |
<xs:element ref="follow_up_v2.0:follow_up_v2.0" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| 216 |
</xs:sequence> |
|
|
|
| 217 |
</xs:complexType> |
|
|
|
| 218 |
</xs:element> |
|
|
|
| |
| 220 |
<xs:element name="clinical_cqcf"> |
+- |
|
|
| 221 |
<xs:complexType> |
|
|
|
| 222 |
<xs:sequence> |
|
|
|
| 223 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
|
|
|
| 224 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
|
|
| |
| 226 |
<xs:choice> |
+- |
|
|
| 227 |
<xs:choice> |
|
|
|
| 228 |
<xs:sequence> |
|
|
|
| 229 |
<xs:element ref="cqcf:day_of_consent"/> |
|
|
|
| 230 |
<xs:element ref="cqcf:month_of_consent"/> |
|
|
|
| 231 |
<xs:element ref="cqcf:year_of_consent"/> |
|
|
|
| 232 |
</xs:sequence> |
|
|
|
| |
| 234 |
<xs:element ref="cqcf:days_to_consent"/> |
+- |
|
|
| 235 |
</xs:choice> |
|
|
|
| |
| 237 |
<xs:choice> |
+- |
|
|
| 238 |
<xs:sequence> |
|
|
|
| 239 |
<xs:element ref="shared:day_of_death"/> |
|
|
|
| 240 |
<xs:element ref="shared:month_of_death"/> |
|
|
|
| 241 |
<xs:element ref="shared:year_of_death"/> |
|
|
|
| 242 |
</xs:sequence> |
|
|
|
| |
| 244 |
<xs:element ref="shared:days_to_death"/> |
+- |
|
|
| 245 |
</xs:choice> |
|
|
|
| 246 |
</xs:choice> |
|
|
|
| |
| 248 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
+- |
|
|
| 249 |
<xs:element ref="shared:prior_diagnosis"/> |
|
|
|
| 250 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
|
|
| 251 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
|
|
|
| 252 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
|
|
| 253 |
<xs:element ref="cqcf:tumor_focality"/> |
|
|
|
| 254 |
<xs:element ref="cqcf:tumor_type"/> |
|
|
|
| 255 |
<xs:element ref="cqcf:other_diagnosis"/> |
|
|
|
| 256 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
|
|
| 257 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
|
|
|
| 258 |
<xs:element ref="cqcf:country"/> |
|
|
|
| |
| 308 |
<xs:extension base="utility:integer_or_null"> |
<> |
236 |
<xs:extension base="xs:integer"> |
| |
| 328 |
<xs:enumeration value="None" /> |
<> |
256 |
<xs:enumeration value="No History of Primary Risk Factors" /> |
| 329 |
<xs:enumeration value="Nonalcoholic Fatty Liver Disease" /> |
|
257 |
<xs:enumeration value="Non-Alcoholic Fatty Liver Disease" /> |
| |
| 352 |
<xs:element name="histological_type" nillable="true"> |
<> |
280 |
<xs:element name="neoplasm_histologic_type_name" nillable="true"> |
| |
| |
|
-+ |
379 |
<xs:element name="neoplasm_histologic_grade" nillable="true"> |
| |
|
|
380 |
<xs:complexType mixed="true"> |
| |
|
|
381 |
<xs:simpleContent> |
| |
|
|
382 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
383 |
<xs:enumeration value="" /> |
| |
|
|
384 |
<xs:enumeration value="G1" /> |
| |
|
|
385 |
<xs:enumeration value="G2" /> |
| |
|
|
386 |
<xs:enumeration value="G3" /> |
| |
|
|
387 |
<xs:enumeration value="G4" /> |
| |
|
|
388 |
<xs:enumeration value="GX" /> |
| |
|
|
389 |
<xs:attribute name="cde" type="xs:string" default="2785839" /> |
| |
|
|
390 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
391 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
392 |
</xs:restriction> |
| |
|
|
393 |
</xs:simpleContent> |
| |
|
|
394 |
</xs:complexType> |
| |
|
|
395 |
</xs:element> |
| |
| |
|
-+ |
397 |
<xs:element name="surgical_margin_resection_status" nillable="true"> |
| |
|
|
398 |
<xs:complexType> |
| |
|
|
399 |
<xs:simpleContent> |
| |
|
|
400 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
401 |
<xs:enumeration value="" /> |
| |
|
|
402 |
<xs:enumeration value="RX" /> |
| |
|
|
403 |
<xs:enumeration value="R0" /> |
| |
|
|
404 |
<xs:enumeration value="R1" /> |
| |
|
|
405 |
<xs:enumeration value="R2" /> |
| |
|
|
406 |
<xs:attribute name="cde" type="xs:string" default="2608702" /> |
| |
|
|
407 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
408 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
409 |
</xs:restriction> |
| |
|
|
410 |
</xs:simpleContent> |
| |
|
|
411 |
</xs:complexType> |
| |
|
|
412 |
</xs:element> |
| |
| |
|
-+ |
414 |
<xs:element name="american_joint_committee_on_cancer_publication_version_type" nillable="true"> |
| |
|
|
415 |
<xs:complexType> |
| |
|
|
416 |
<xs:simpleContent> |
| |
|
|
417 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
418 |
<xs:enumeration value="" /> |
| |
|
|
419 |
<xs:enumeration value="1st" /> |
| |
|
|
420 |
<xs:enumeration value="2nd" /> |
| |
|
|
421 |
<xs:enumeration value="3rd" /> |
| |
|
|
422 |
<xs:enumeration value="4th" /> |
| |
|
|
423 |
<xs:enumeration value="5th" /> |
| |
|
|
424 |
<xs:enumeration value="6th" /> |
| |
|
|
425 |
<xs:enumeration value="7th" /> |
| |
|
|
426 |
<xs:attribute name="cde" type="xs:string" default="2722309" /> |
| |
|
|
427 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
428 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
429 |
</xs:restriction> |
| |
|
|
430 |
</xs:simpleContent> |
| |
|
|
431 |
</xs:complexType> |
| |
|
|
432 |
</xs:element> |
| |
| |
|
-+ |
434 |
<xs:element name="american_joint_committee_on_cancer_tumor_stage_code" nillable="true"> |
| |
|
|
435 |
<xs:complexType> |
| |
|
|
436 |
<xs:simpleContent> |
| |
|
|
437 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
438 |
<xs:enumeration value="" /> |
| |
|
|
439 |
<xs:enumeration value="T0" /> |
| |
|
|
440 |
<xs:enumeration value="T1" /> |
| |
|
|
441 |
<xs:enumeration value="T1a" /> |
| |
|
|
442 |
<xs:enumeration value="T1b" /> |
| |
|
|
443 |
<xs:enumeration value="T1c" /> |
| |
|
|
444 |
<xs:enumeration value="T1mi" /> |
| |
|
|
445 |
<xs:enumeration value="T2" /> |
| |
|
|
446 |
<xs:enumeration value="T2a" /> |
| |
|
|
447 |
<xs:enumeration value="T2b" /> |
| |
|
|
448 |
<xs:enumeration value="T2c" /> |
| |
|
|
449 |
<xs:enumeration value="T3" /> |
| |
|
|
450 |
<xs:enumeration value="T3a" /> |
| |
|
|
451 |
<xs:enumeration value="T3b" /> |
| |
|
|
452 |
<xs:enumeration value="T3c" /> |
| |
|
|
453 |
<xs:enumeration value="T4" /> |
| |
|
|
454 |
<xs:enumeration value="T4a" /> |
| |
|
|
455 |
<xs:enumeration value="T4b" /> |
| |
|
|
456 |
<xs:enumeration value="T4c" /> |
| |
|
|
457 |
<xs:enumeration value="T4d" /> |
| |
|
|
458 |
<xs:enumeration value="Ta" /> |
| |
|
|
459 |
<xs:enumeration value="Tis" /> |
| |
|
|
460 |
<xs:enumeration value="Tis (DCIS)" /> |
| |
|
|
461 |
<xs:enumeration value="Tis (LCIS)" /> |
| |
|
|
462 |
<xs:enumeration value="Tis (Paget's)" /> |
| |
|
|
463 |
<xs:enumeration value="TX" /> |
| |
|
|
464 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
465 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
466 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
467 |
</xs:restriction> |
| |
|
|
468 |
</xs:simpleContent> |
| |
|
|
469 |
</xs:complexType> |
| |
|
|
470 |
</xs:element> |
| |
| |
|
-+ |
472 |
<xs:element name="neoplasm_disease_lymph_node_stage_american_joint_committee_on_cancer_code" nillable="true"> |
| |
|
|
473 |
<xs:complexType> |
| |
|
|
474 |
<xs:simpleContent> |
| |
|
|
475 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
476 |
<xs:enumeration value="" /> |
| |
|
|
477 |
<xs:enumeration value="N0" /> |
| |
|
|
478 |
<xs:enumeration value="N0 (i+)" /> |
| |
|
|
479 |
<xs:enumeration value="N0 (i-)" /> |
| |
|
|
480 |
<xs:enumeration value="N0 (mol+)" /> |
| |
|
|
481 |
<xs:enumeration value="N0 (mol-)" /> |
| |
|
|
482 |
<xs:enumeration value="N1" /> |
| |
|
|
483 |
<xs:enumeration value="N1a" /> |
| |
|
|
484 |
<xs:enumeration value="N1b" /> |
| |
|
|
485 |
<xs:enumeration value="N1bI" /> |
| |
|
|
486 |
<xs:enumeration value="N1bII" /> |
| |
|
|
487 |
<xs:enumeration value="N1bIII" /> |
| |
|
|
488 |
<xs:enumeration value="N1bIV" /> |
| |
|
|
489 |
<xs:enumeration value="N1c" /> |
| |
|
|
490 |
<xs:enumeration value="N1mi" /> |
| |
|
|
491 |
<xs:enumeration value="N2" /> |
| |
|
|
492 |
<xs:enumeration value="N2a" /> |
| |
|
|
493 |
<xs:enumeration value="N2b" /> |
| |
|
|
494 |
<xs:enumeration value="N3" /> |
| |
|
|
495 |
<xs:enumeration value="N3a" /> |
| |
|
|
496 |
<xs:enumeration value="N3b" /> |
| |
|
|
497 |
<xs:enumeration value="N3c" /> |
| |
|
|
498 |
<xs:enumeration value="N4" /> |
| |
|
|
499 |
<xs:enumeration value="NX" /> |
| |
|
|
500 |
<xs:attribute name="cde" type="xs:string" default="3203106" /> |
| |
|
|
501 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
502 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
503 |
</xs:restriction> |
| |
|
|
504 |
</xs:simpleContent> |
| |
|
|
505 |
</xs:complexType> |
| |
|
|
506 |
</xs:element> |
| |
| |
|
-+ |
508 |
<xs:element name="american_joint_committee_on_cancer_metastasis_stage_code" nillable="true"> |
| |
|
|
509 |
<xs:complexType> |
| |
|
|
510 |
<xs:simpleContent> |
| |
|
|
511 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
512 |
<xs:enumeration value="" /> |
| |
|
|
513 |
<xs:enumeration value="cM0 (i+)" /> |
| |
|
|
514 |
<xs:enumeration value="M0" /> |
| |
|
|
515 |
<xs:enumeration value="M1" /> |
| |
|
|
516 |
<xs:enumeration value="M1a" /> |
| |
|
|
517 |
<xs:enumeration value="M1b" /> |
| |
|
|
518 |
<xs:enumeration value="M1c" /> |
| |
|
|
519 |
<xs:enumeration value="MX" /> |
| |
|
|
520 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
521 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
522 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
523 |
</xs:restriction> |
| |
|
|
524 |
</xs:simpleContent> |
| |
|
|
525 |
</xs:complexType> |
| |
|
|
526 |
</xs:element> |
| |
| |
|
-+ |
528 |
<xs:element name="neoplasm_disease_stage_american_joint_committee_on_cancer_code" nillable="true"> |
| |
|
|
529 |
<xs:complexType> |
| |
|
|
530 |
<xs:simpleContent> |
| |
|
|
531 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
532 |
<xs:enumeration value="" /> |
| |
|
|
533 |
<xs:enumeration value="Stage 0" /> |
| |
|
|
534 |
<xs:enumeration value="Stage I" /> |
| |
|
|
535 |
<xs:enumeration value="Stage IA" /> |
| |
|
|
536 |
<xs:enumeration value="Stage IA1" /> |
| |
|
|
537 |
<xs:enumeration value="Stage IA2" /> |
| |
|
|
538 |
<xs:enumeration value="Stage IB" /> |
| |
|
|
539 |
<xs:enumeration value="Stage IB Cervix" /> |
| |
|
|
540 |
<xs:enumeration value="Stage IB1" /> |
| |
|
|
541 |
<xs:enumeration value="Stage IB2" /> |
| |
|
|
542 |
<xs:enumeration value="Stage II" /> |
| |
|
|
543 |
<xs:enumeration value="Stage II Cervix" /> |
| |
|
|
544 |
<xs:enumeration value="Stage IIA" /> |
| |
|
|
545 |
<xs:enumeration value="Stage IIA Cervix" /> |
| |
|
|
546 |
<xs:enumeration value="Stage IIB" /> |
| |
|
|
547 |
<xs:enumeration value="Stage IIC" /> |
| |
|
|
548 |
<xs:enumeration value="Stage III" /> |
| |
|
|
549 |
<xs:enumeration value="Stage IIIA" /> |
| |
|
|
550 |
<xs:enumeration value="Stage IIIB" /> |
| |
|
|
551 |
<xs:enumeration value="Stage IIIC" /> |
| |
|
|
552 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
553 |
<xs:enumeration value="Stage IVA" /> |
| |
|
|
554 |
<xs:enumeration value="Stage IVB" /> |
| |
|
|
555 |
<xs:enumeration value="Stage IVC" /> |
| |
|
|
556 |
<xs:enumeration value="Stage Tis" /> |
| |
|
|
557 |
<xs:enumeration value="Stage X" /> |
| |
|
|
558 |
<xs:attribute name="cde" type="xs:string" default="3203222" /> |
| |
|
|
559 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
560 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
561 |
</xs:restriction> |
| |
|
|
562 |
</xs:simpleContent> |
| |
|
|
563 |
</xs:complexType> |
| |
|
|
564 |
</xs:element> |
| |
| 487 |
<xs:extension base="utility:number_or_null"> |
<> |
602 |
<xs:extension base="xs:decimal"> |
| |
| 492 |
<xs:attribute name="units" type="xs:string" fixed="ng/ml"/> |
+- |
|
|
| |
| 501 |
<xs:extension base="utility:number_or_null"> |
<> |
615 |
<xs:extension base="xs:decimal"> |
| |
| 506 |
<xs:attribute name="units" type="xs:string" fixed="ng/ml"/> |
+- |
|
|
| |
| 515 |
<xs:extension base="utility:number_or_null"> |
<> |
628 |
<xs:extension base="xs:decimal"> |
| |
| 520 |
<xs:attribute name="units" type="xs:string" fixed="ng/ml"/> |
+- |
|
|
| |
| 526 |
<xs:element name="lab_procedure_platelet_result_specified_value" nillable="true"> |
<> |
638 |
<xs:element name="laboratory_procedure_platelet_result_specified_value" nillable="true"> |
| |
| 529 |
<xs:extension base="utility:number_or_null"> |
<> |
641 |
<xs:extension base="xs:decimal"> |
| |
| 534 |
<xs:attribute name="units" type="xs:string" fixed="1000/uL"/> |
+- |
|
|
| |
| 543 |
<xs:extension base="utility:number_or_null"> |
<> |
654 |
<xs:extension base="xs:decimal"> |
| |
| 556 |
<xs:extension base="utility:number_or_null"> |
<> |
667 |
<xs:extension base="xs:decimal"> |
| |
| 569 |
<xs:extension base="utility:number_or_null"> |
<> |
680 |
<xs:extension base="xs:decimal"> |
| |
| 574 |
<xs:attribute name="units" type="xs:string" fixed="seconds"/> |
+- |
|
|
| |
| 583 |
<xs:extension base="utility:number_or_null"> |
<> |
693 |
<xs:extension base="xs:decimal"> |
| |
| 588 |
<xs:attribute name="units" type="xs:string" fixed="seconds"/> |
+- |
|
|
| |
| 597 |
<xs:extension base="utility:number_or_null"> |
<> |
706 |
<xs:extension base="xs:decimal"> |
| |
| 602 |
<xs:attribute name="units" type="xs:string" fixed="seconds"/> |
+- |
|
|
| |
| 611 |
<xs:extension base="utility:number_or_null"> |
<> |
719 |
<xs:extension base="xs:decimal"> |
| |
| 616 |
<xs:attribute name="units" type="xs:string" fixed="mg/dL"/> |
+- |
|
|
| |
| 625 |
<xs:extension base="utility:number_or_null"> |
<> |
732 |
<xs:extension base="xs:decimal"> |
| |
| 630 |
<xs:attribute name="units" type="xs:string" fixed="mg/dL"/> |
+- |
|
|
| |
| 639 |
<xs:extension base="utility:number_or_null"> |
<> |
745 |
<xs:extension base="xs:decimal"> |
| |
| 644 |
<xs:attribute name="units" type="xs:string" fixed="mg/dL"/> |
+- |
|
|
| |
| 653 |
<xs:extension base="utility:number_or_null"> |
<> |
758 |
<xs:extension base="xs:decimal"> |
| |
| 658 |
<xs:attribute name="units" type="xs:string" fixed="mg/dL"/> |
+- |
|
|
| |
| 667 |
<xs:extension base="utility:number_or_null"> |
<> |
771 |
<xs:extension base="xs:decimal"> |
| |
| 672 |
<xs:attribute name="units" type="xs:string" fixed="mg/dL"/> |
+- |
|
|
| |
| 681 |
<xs:extension base="utility:number_or_null"> |
<> |
784 |
<xs:extension base="xs:decimal"> |
| |
| 686 |
<xs:attribute name="units" type="xs:string" fixed="mg/dL"/> |
+- |
|
|
| |
| 695 |
<xs:extension base="utility:number_or_null"> |
<> |
797 |
<xs:extension base="xs:decimal"> |
| |
| 700 |
<xs:attribute name="units" type="xs:string" fixed="mg/dL"/> |
+- |
|
|
| |
| 709 |
<xs:extension base="utility:number_or_null"> |
<> |
810 |
<xs:extension base="xs:decimal"> |
| |
| 714 |
<xs:attribute name="units" type="xs:string" fixed="mg/dL"/> |
+- |
|
|
| |
| 723 |
<xs:extension base="utility:number_or_null"> |
<> |
823 |
<xs:extension base="xs:decimal"> |
| |
| 728 |
<xs:attribute name="units" type="xs:string" fixed="mg/dL"/> |
+- |
|
|
| |
| |
|
-+ |
869 |
<xs:element name="performance_status_assessment_eastern_cooperative_oncology_group_scale" nillable="true"> |
| |
|
|
870 |
<xs:complexType mixed="true"> |
| |
|
|
871 |
<xs:simpleContent> |
| |
|
|
872 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
873 |
<xs:enumeration value="" /> |
| |
|
|
874 |
<xs:enumeration value="0" /> |
| |
|
|
875 |
<xs:enumeration value="1" /> |
| |
|
|
876 |
<xs:enumeration value="2" /> |
| |
|
|
877 |
<xs:enumeration value="3" /> |
| |
|
|
878 |
<xs:enumeration value="4" /> |
| |
|
|
879 |
<xs:enumeration value="5" /> |
| |
|
|
880 |
<xs:attribute name="cde" type="xs:string" default="88" /> |
| |
|
|
881 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
882 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
883 |
</xs:restriction> |
| |
|
|
884 |
</xs:simpleContent> |
| |
|
|
885 |
</xs:complexType> |
| |
|
|
886 |
</xs:element> |
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:lusc_luad_shared="http://tcga.nci/bcr/xml/clinical/shared/lusc_luad/2.5" |
|
|
|
| 10 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 11 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 12 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 13 |
xmlns:follow_up_v1.0="http://tcga.nci/bcr/xml/clinical/luad/followup/2.5/1.0" |
|
|
|
| 14 |
xmlns="http://tcga.nci/bcr/xml/clinical/luad/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/luad/2.4" |
| 15 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/luad/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/luad/2.4" |
| |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 39 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/luad/followup/2.5/1.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/luad/followup/2.5/TCGA_BCR.LUAD_Clinical_FollowUp_v1.0.xsd" /> |
|
|
|
| 40 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/lusc_luad/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_LUSC_LUAD_Elements.xsd" /> |
|
|
|
| |
| 49 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 57 |
<xs:element ref="lusc_luad_shared:histological_type" /> |
<> |
49 |
<xs:element ref="histological_type" /> |
| |
| 142 |
<xs:element ref="lusc_luad_shared:tumor_stage" /> |
<> |
135 |
<xs:element ref="tumor_stage" /> |
| 143 |
<xs:element ref="lusc_luad_shared:primary_tumor_pathologic_spread" /> |
|
136 |
<xs:element ref="primary_tumor_pathologic_spread" /> |
| 144 |
<xs:element ref="lusc_luad_shared:lymphnode_pathologic_spread" /> |
|
137 |
<xs:element ref="lymphnode_pathologic_spread" /> |
| 145 |
<xs:element ref="lusc_luad_shared:distant_metastasis_pathologic_spread" /> |
|
138 |
<xs:element ref="distant_metastasis_pathologic_spread" /> |
| 146 |
<xs:element ref="shared:karnofsky_performance_score" /> |
|
139 |
<xs:element ref="karnofsky_performance_score" /> |
| 147 |
<xs:element ref="shared:eastern_cancer_oncology_group" /> |
|
140 |
<xs:element ref="eastern_cancer_oncology_group" /> |
| 148 |
<xs:element ref="lusc_luad_shared:tobacco_smoking_history_indicator" /> |
|
141 |
<xs:element ref="tobacco_smoking_history_indicator" /> |
| 149 |
<xs:element ref="lusc_luad_shared:year_of_tobacco_smoking_onset" /> |
|
142 |
<xs:element ref="year_of_tobacco_smoking_onset" /> |
| 150 |
<xs:element ref="shared:stopped_smoking_year" /> |
|
143 |
<xs:element ref="year_of_tobacco_smoking_cessation" /> |
| 151 |
<xs:element ref="shared:number_pack_years_smoked" /> |
|
144 |
<xs:element ref="number_pack_years_smoked" /> |
| 152 |
<xs:element ref="shared:anatomic_organ_subdivision" /> |
|
145 |
<xs:element ref="anatomic_organ_subdivision" /> |
| 153 |
<xs:element ref="lusc_luad_shared:diagnosis" /> |
|
146 |
<xs:element ref="diagnosis" /> |
| 154 |
<xs:element ref="lusc_luad_shared:location_in_lung_parenchyma" /> |
|
147 |
<xs:element ref="location_in_lung_parenchyma" /> |
| 155 |
<xs:element ref="shared:residual_tumor" /> |
|
148 |
<xs:element ref="residual_tumor" /> |
| 156 |
<xs:element ref="lusc_luad_shared:kras_mutation_found" /> |
|
149 |
<xs:element ref="kras_mutation_found" /> |
| 157 |
<xs:element ref="lusc_luad_shared:kras_gene_analysis_performed" /> |
|
150 |
<xs:element ref="kras_gene_analysis_performed" /> |
| 158 |
<xs:element ref="lusc_luad_shared:kras_mutation_result" /> |
|
151 |
<xs:element ref="kras_mutation_result" /> |
| 159 |
<xs:element ref="lusc_luad_shared:egfr_mutation_performed" /> |
|
152 |
<xs:element ref="egfr_mutation_performed" /> |
| 160 |
<xs:element ref="lusc_luad_shared:egfr_mutation_result" /> |
|
153 |
<xs:element ref="egfr_mutation_result" /> |
| 161 |
<xs:element ref="lusc_luad_shared:eml4_alk_translocation_performed" /> |
|
154 |
<xs:element ref="eml4_alk_translocation_performed" /> |
| 162 |
<xs:element ref="lusc_luad_shared:eml4_alk_translocation_result" /> |
|
155 |
<xs:element ref="eml4_alk_translocation_result" /> |
| 163 |
<xs:element ref="lusc_luad_shared:eml4_alk_translocation_method" /> |
|
156 |
<xs:element ref="eml4_alk_translocation_method" /> |
| |
| 166 |
|
<> |
159 |
</xs:sequence> |
| |
|
|
160 |
</xs:complexType> |
| |
|
|
161 |
</xs:element> |
| |
| 167 |
<xs:element ref="lusc_luad_shared:clinical_cqcf" /> |
<> |
163 |
<xs:element name="egfr_mutation_result" nillable="true"> |
| 168 |
|
|
164 |
<xs:complexType mixed="true"> |
| |
|
|
165 |
<xs:simpleContent> |
| |
|
|
166 |
<xs:restriction base="utility:clinical_res_attributes"> |
| 169 |
<xs:element name="follow_ups"> |
|
167 |
<xs:enumeration value="" /> |
| |
|
|
168 |
<xs:enumeration value="G719X" /> |
| |
|
|
169 |
<xs:enumeration value="Exon 19 Deletion" /> |
| |
|
|
170 |
<xs:enumeration value="Exon 20 Insertion" /> |
| |
|
|
171 |
<xs:enumeration value="T790M" /> |
| |
|
|
172 |
<xs:enumeration value="L858R" /> |
| |
|
|
173 |
<xs:enumeration value="L861Q" /> |
| |
|
|
174 |
<xs:enumeration value="Other" /> |
| |
|
|
175 |
<xs:attribute name="cde" type="xs:string" default="3147627" /> |
| |
|
|
176 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
177 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
178 |
</xs:restriction> |
| |
|
|
179 |
</xs:simpleContent> |
| |
|
|
180 |
</xs:complexType> |
| |
|
|
181 |
</xs:element> |
| |
| |
|
<> |
183 |
<xs:element name="eml4_alk_translocation_result" nillable="true"> |
| |
|
|
184 |
<xs:complexType mixed="true"> |
| 170 |
<xs:annotation> |
|
185 |
<xs:simpleContent> |
| 171 |
<xs:documentation>We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
186 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
187 |
<xs:enumeration value="" /> |
| |
|
|
188 |
<xs:enumeration value="Variant 1" /> |
| |
|
|
189 |
<xs:enumeration value="Variant 2" /> |
| |
|
|
190 |
<xs:enumeration value="Variant 3" /> |
| |
|
|
191 |
<xs:enumeration value="Variant 4" /> |
| |
|
|
192 |
<xs:enumeration value="Variant 5" /> |
| |
|
|
193 |
<xs:attribute name="cde" type="xs:string" default="3139445" /> |
| |
|
|
194 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
195 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
196 |
</xs:restriction> |
| |
|
|
197 |
</xs:simpleContent> |
| |
|
|
198 |
</xs:complexType> |
| |
|
|
199 |
</xs:element> |
| |
| |
|
-+ |
201 |
<xs:element name="eml4_alk_translocation_method" nillable="true"> |
| |
|
|
202 |
<xs:complexType mixed="true"> |
| |
|
|
203 |
<xs:simpleContent> |
| |
|
|
204 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
205 |
<xs:enumeration value="" /> |
| |
|
|
206 |
<xs:enumeration value="IHC" /> |
| |
|
|
207 |
<xs:enumeration value="FISH" /> |
| |
|
|
208 |
<xs:enumeration value="RT-PCR" /> |
| |
|
|
209 |
<xs:enumeration value="Other" /> |
| |
|
|
210 |
<xs:attribute name="cde" type="xs:string" default="3139449" /> |
| |
|
|
211 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
212 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
213 |
</xs:restriction> |
| |
|
|
214 |
</xs:simpleContent> |
| |
|
|
215 |
</xs:complexType> |
| |
|
|
216 |
</xs:element> |
| |
| |
|
<> |
218 |
<xs:element name="egfr_mutation_performed" nillable="true"> |
| |
|
|
219 |
<xs:complexType> |
| |
|
|
220 |
<xs:simpleContent> |
| |
|
|
221 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
222 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
223 |
<xs:attribute name="cde" type="xs:string" default="3139429" /> |
| |
|
|
224 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
225 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 172 |
</xs:annotation> |
|
226 |
</xs:extension> |
| |
|
|
227 |
</xs:simpleContent> |
| |
|
|
228 |
</xs:complexType> |
| |
|
|
229 |
</xs:element> |
| |
| |
|
-+ |
231 |
<xs:element name="eml4_alk_translocation_performed" nillable="true"> |
| |
| |
|
<> |
233 |
<xs:simpleContent> |
| |
|
|
234 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
235 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
236 |
<xs:attribute name="cde" type="xs:string" default="3139437" /> |
| |
|
|
237 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
238 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
239 |
</xs:extension> |
| |
|
|
240 |
</xs:simpleContent> |
| |
|
|
241 |
</xs:complexType> |
| 174 |
<xs:sequence> |
|
242 |
</xs:element> |
| |
| |
|
-+ |
244 |
<xs:element name="histological_type" nillable="true"> |
| |
|
|
245 |
<xs:complexType mixed="true"> |
| |
|
|
246 |
<xs:simpleContent> |
| |
|
|
247 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
248 |
<xs:attribute name="cde" type="xs:string" default="3081934" /> |
| |
|
|
249 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
250 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
251 |
</xs:restriction> |
| |
|
|
252 |
</xs:simpleContent> |
| |
|
|
253 |
</xs:complexType> |
| |
|
|
254 |
</xs:element> |
| |
| |
|
-+ |
256 |
<xs:element name="diagnosis" nillable="true"> |
| |
|
|
257 |
<xs:complexType mixed="true"> |
| |
|
|
258 |
<xs:simpleContent> |
| |
|
|
259 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
260 |
<xs:attribute name="cde" type="xs:string" default="3081932" /> |
| |
|
|
261 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
262 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
263 |
</xs:restriction> |
| |
|
|
264 |
</xs:simpleContent> |
| |
|
|
265 |
</xs:complexType> |
| |
|
|
266 |
</xs:element> |
| |
| |
|
-+ |
268 |
<xs:element name="location_in_lung_parenchyma" nillable="true"> |
| |
|
|
269 |
<xs:complexType mixed="true"> |
| |
|
|
270 |
<xs:simpleContent> |
| |
|
|
271 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
272 |
<xs:enumeration value="" /> |
| |
|
|
273 |
<xs:enumeration value="Peripheral Lung" /> |
| |
|
|
274 |
<xs:enumeration value="Central Lung" /> |
| |
|
|
275 |
<xs:attribute name="cde" type="xs:string" default="3139453" /> |
| |
|
|
276 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
277 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
278 |
</xs:restriction> |
| |
|
|
279 |
</xs:simpleContent> |
| |
|
|
280 |
</xs:complexType> |
| |
|
|
281 |
</xs:element> |
| |
| |
|
-+ |
283 |
<xs:element name="anatomic_organ_subdivision" nillable="true"> |
| |
|
|
284 |
<xs:complexType mixed="true"> |
| |
|
|
285 |
<xs:simpleContent> |
| |
|
|
286 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
287 |
<xs:enumeration value="" /> |
| |
|
|
288 |
<xs:enumeration value="R-Upper" /> |
| |
|
|
289 |
<xs:enumeration value="R-Middle" /> |
| |
|
|
290 |
<xs:enumeration value="R-Lower" /> |
| |
|
|
291 |
<xs:enumeration value="L-Upper" /> |
| |
|
|
292 |
<xs:enumeration value="L-Lower" /> |
| |
|
|
293 |
<xs:enumeration value="Bronchial" /> |
| |
|
|
294 |
<xs:enumeration value="Mediastinal" /> |
| |
|
|
295 |
<xs:attribute name="cde" type="xs:string" default="2008006" /> |
| |
|
|
296 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
297 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
298 |
</xs:restriction> |
| |
|
|
299 |
</xs:simpleContent> |
| |
|
|
300 |
</xs:complexType> |
| |
|
|
301 |
</xs:element> |
| |
| |
|
-+ |
303 |
<xs:element name="kras_mutation_result" nillable="true"> |
| |
|
|
304 |
<xs:complexType mixed="true"> |
| |
|
|
305 |
<xs:simpleContent> |
| |
|
|
306 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
307 |
<xs:enumeration value="" /> |
| |
|
|
308 |
<xs:enumeration value="G12A" /> |
| |
|
|
309 |
<xs:enumeration value="G12C" /> |
| |
|
|
310 |
<xs:enumeration value="G12D" /> |
| |
|
|
311 |
<xs:enumeration value="G12R" /> |
| |
|
|
312 |
<xs:enumeration value="G12S" /> |
| |
|
|
313 |
<xs:enumeration value="G12V" /> |
| |
|
|
314 |
<xs:enumeration value="G13D" /> |
| |
|
|
315 |
<xs:enumeration value="Other" /> |
| |
|
|
316 |
<xs:attribute name="cde" type="xs:string" default="3147614" /> |
| |
|
|
317 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
318 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
319 |
</xs:restriction> |
| |
|
|
320 |
</xs:simpleContent> |
| |
|
|
321 |
</xs:complexType> |
| |
|
|
322 |
</xs:element> |
| |
| |
|
-+ |
324 |
<xs:element name="number_pack_years_smoked" nillable="true"> |
| |
|
|
325 |
<xs:complexType mixed="true"> |
| |
|
|
326 |
<xs:simpleContent> |
| |
|
|
327 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
328 |
<xs:attribute name="cde" type="xs:string" default="2955385" /> |
| |
|
|
329 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
330 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
331 |
</xs:restriction> |
| |
|
|
332 |
</xs:simpleContent> |
| |
|
|
333 |
</xs:complexType> |
| |
|
|
334 |
</xs:element> |
| |
| |
|
-+ |
336 |
<xs:element name="tobacco_smoking_history_indicator" nillable="true"> |
| |
|
|
337 |
<xs:complexType> |
| |
|
|
338 |
<xs:simpleContent> |
| |
|
|
339 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
340 |
<xs:enumeration value="" /> |
| |
|
|
341 |
<xs:enumeration value="Lifelong Non-smoker" /> |
| |
|
|
342 |
<xs:enumeration value="Current smoker" /> |
| |
|
|
343 |
<xs:enumeration value="Current reformed smoker for > 15 years" /> |
| |
|
|
344 |
<xs:enumeration value="Current reformed smoker for < or = 15 years" /> |
| |
|
|
345 |
<xs:attribute name="cde" type="xs:string" default="2181650" /> |
| |
|
|
346 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
347 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
348 |
</xs:restriction> |
| |
|
|
349 |
</xs:simpleContent> |
| |
|
|
350 |
</xs:complexType> |
| |
|
|
351 |
</xs:element> |
| |
| 175 |
<xs:element ref="follow_up_v1.0:follow_up_v1.0" minOccurs="0" maxOccurs="unbounded" /> |
<> |
353 |
<xs:element name="year_of_tobacco_smoking_onset" nillable="true"> |
| |
|
|
354 |
<xs:complexType mixed="true"> |
| |
|
|
355 |
<xs:simpleContent> |
| |
|
|
356 |
<xs:extension base="utility:generic_year"> |
| |
|
|
357 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
358 |
<xs:attribute name="cde" type="xs:string" default="2228604" /> |
| |
|
|
359 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
360 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
361 |
</xs:extension> |
| |
|
|
362 |
</xs:simpleContent> |
| |
|
|
363 |
</xs:complexType> |
| 176 |
</xs:sequence> |
|
364 |
</xs:element> |
| |
| |
|
-+ |
366 |
<xs:element name="year_of_tobacco_smoking_cessation" nillable="true"> |
| |
|
|
367 |
<xs:complexType mixed="true"> |
| |
|
|
368 |
<xs:simpleContent> |
| |
|
|
369 |
<xs:extension base="utility:generic_year"> |
| |
|
|
370 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
371 |
<xs:attribute name="cde" type="xs:string" default="2228610" /> |
| |
|
|
372 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
373 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
374 |
</xs:extension> |
| |
|
|
375 |
</xs:simpleContent> |
| |
| |
|
<> |
379 |
<xs:element name="kras_mutation_found" nillable="true"> |
| |
|
|
380 |
<xs:complexType> |
| |
|
|
381 |
<xs:simpleContent> |
| |
|
|
382 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
383 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
384 |
<xs:attribute name="cde" type="xs:string" default="2932340" /> |
| |
|
|
385 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
386 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
387 |
</xs:extension> |
| |
|
|
388 |
</xs:simpleContent> |
| |
|
|
389 |
</xs:complexType> |
| 179 |
</xs:sequence> |
|
390 |
</xs:element> |
| |
| |
|
-+ |
392 |
<xs:element name="kras_gene_analysis_performed" nillable="true"> |
| |
|
|
393 |
<xs:complexType> |
| |
|
|
394 |
<xs:simpleContent> |
| |
|
|
395 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
396 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
397 |
<xs:attribute name="cde" type="xs:string" default="3123147" /> |
| |
|
|
398 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
399 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
400 |
</xs:extension> |
| |
|
|
401 |
</xs:simpleContent> |
| |
| |
|
-+ |
405 |
<xs:element name="residual_tumor" nillable="true"> |
| |
|
|
406 |
<xs:complexType> |
| |
|
|
407 |
<xs:simpleContent> |
| |
|
|
408 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
409 |
<xs:enumeration value="" /> |
| |
|
|
410 |
<xs:enumeration value="RX" /> |
| |
|
|
411 |
<xs:enumeration value="R0" /> |
| |
|
|
412 |
<xs:enumeration value="R1" /> |
| |
|
|
413 |
<xs:enumeration value="R2" /> |
| |
|
|
414 |
<xs:attribute name="cde" type="xs:string" default="2608702" /> |
| |
|
|
415 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
416 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
417 |
</xs:restriction> |
| |
|
|
418 |
</xs:simpleContent> |
| |
|
|
419 |
</xs:complexType> |
| |
|
|
420 |
</xs:element> |
| |
| |
|
-+ |
422 |
<xs:element name="primary_therapy_outcome_success" nillable="true"> |
| |
|
|
423 |
<xs:complexType> |
| |
|
|
424 |
<xs:simpleContent> |
| |
|
|
425 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
426 |
<xs:enumeration value="" /> |
| |
|
|
427 |
<xs:enumeration value="PROGRESSIVE DISEASE" /> |
| |
|
|
428 |
<xs:enumeration value="STABLE DISEASE" /> |
| |
|
|
429 |
<xs:enumeration value="PARTIAL RESPONSE" /> |
| |
|
|
430 |
<xs:enumeration value="COMPLETE RESPONSE" /> |
| |
|
|
431 |
<xs:attribute name="cde" type="xs:string" default="2786727" /> |
| |
|
|
432 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
433 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
434 |
</xs:restriction> |
| |
|
|
435 |
</xs:simpleContent> |
| |
|
|
436 |
</xs:complexType> |
| |
|
|
437 |
</xs:element> |
| |
| |
|
-+ |
439 |
<xs:element name="karnofsky_performance_score"> |
| |
|
|
440 |
<xs:complexType> |
| |
|
|
441 |
<xs:simpleContent> |
| |
|
|
442 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
443 |
<xs:enumeration value="" /> |
| |
|
|
444 |
<xs:enumeration value="0" /> |
| |
|
|
445 |
<xs:enumeration value="10" /> |
| |
|
|
446 |
<xs:enumeration value="20" /> |
| |
|
|
447 |
<xs:enumeration value="30" /> |
| |
|
|
448 |
<xs:enumeration value="40" /> |
| |
|
|
449 |
<xs:enumeration value="50" /> |
| |
|
|
450 |
<xs:enumeration value="60" /> |
| |
|
|
451 |
<xs:enumeration value="70" /> |
| |
|
|
452 |
<xs:enumeration value="80" /> |
| |
|
|
453 |
<xs:enumeration value="90" /> |
| |
|
|
454 |
<xs:enumeration value="100" /> |
| |
|
|
455 |
<xs:attribute name="cde" type="xs:string" default="2003853" /> |
| |
|
|
456 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
457 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
458 |
</xs:restriction> |
| |
|
|
459 |
</xs:simpleContent> |
| |
|
|
460 |
</xs:complexType> |
| |
|
|
461 |
</xs:element> |
| |
| |
|
-+ |
463 |
<xs:element name="eastern_cancer_oncology_group"> |
| |
|
|
464 |
<xs:complexType> |
| |
|
|
465 |
<xs:simpleContent> |
| |
|
|
466 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
467 |
<xs:enumeration value="" /> |
| |
|
|
468 |
<xs:enumeration value="0" /> |
| |
|
|
469 |
<xs:enumeration value="1" /> |
| |
|
|
470 |
<xs:enumeration value="2" /> |
| |
|
|
471 |
<xs:enumeration value="3" /> |
| |
|
|
472 |
<xs:enumeration value="4" /> |
| |
|
|
473 |
<xs:attribute name="cde" type="xs:string" default="88" /> |
| |
|
|
474 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
475 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
476 |
</xs:restriction> |
| |
|
|
477 |
</xs:simpleContent> |
| |
|
|
478 |
</xs:complexType> |
| |
|
|
479 |
</xs:element> |
| |
| |
|
-+ |
481 |
<xs:element name="primary_tumor_pathologic_spread" nillable="true"> |
| |
|
|
482 |
<xs:complexType> |
| |
|
|
483 |
<xs:simpleContent> |
| |
|
|
484 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
485 |
<xs:enumeration value="" /> |
| |
|
|
486 |
<xs:enumeration value="TX" /> |
| |
|
|
487 |
<xs:enumeration value="T0" /> |
| |
|
|
488 |
<xs:enumeration value="Tis" /> |
| |
|
|
489 |
<xs:enumeration value="T1" /> |
| |
|
|
490 |
<xs:enumeration value="T1a" /> |
| |
|
|
491 |
<xs:enumeration value="T1b" /> |
| |
|
|
492 |
<xs:enumeration value="T2" /> |
| |
|
|
493 |
<xs:enumeration value="T2a" /> |
| |
|
|
494 |
<xs:enumeration value="T2b" /> |
| |
|
|
495 |
<xs:enumeration value="T3" /> |
| |
|
|
496 |
<xs:enumeration value="T4" /> |
| |
|
|
497 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
498 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
499 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
500 |
</xs:restriction> |
| |
|
|
501 |
</xs:simpleContent> |
| |
|
|
502 |
</xs:complexType> |
| |
|
|
503 |
</xs:element> |
| |
| |
|
-+ |
505 |
<xs:element name="lymphnode_pathologic_spread" nillable="true"> |
| |
|
|
506 |
<xs:complexType> |
| |
|
|
507 |
<xs:simpleContent> |
| |
|
|
508 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
509 |
<xs:enumeration value="" /> |
| |
|
|
510 |
<xs:enumeration value="NX" /> |
| |
|
|
511 |
<xs:enumeration value="N0" /> |
| |
|
|
512 |
<xs:enumeration value="N1" /> |
| |
|
|
513 |
<xs:enumeration value="N2" /> |
| |
|
|
514 |
<xs:enumeration value="N3" /> |
| |
|
|
515 |
<xs:attribute name="cde" type="xs:string" default="3065858" /> |
| |
|
|
516 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
517 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
518 |
</xs:restriction> |
| |
|
|
519 |
</xs:simpleContent> |
| |
|
|
520 |
</xs:complexType> |
| |
|
|
521 |
</xs:element> |
| |
| |
|
-+ |
523 |
<xs:element name="distant_metastasis_pathologic_spread" nillable="true"> |
| |
|
|
524 |
<xs:complexType> |
| |
|
|
525 |
<xs:simpleContent> |
| |
|
|
526 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
527 |
<xs:enumeration value="" /> |
| |
|
|
528 |
<xs:enumeration value="M0" /> |
| |
|
|
529 |
<xs:enumeration value="M1" /> |
| |
|
|
530 |
<xs:enumeration value="M1a" /> |
| |
|
|
531 |
<xs:enumeration value="M1b" /> |
| |
|
|
532 |
<xs:enumeration value="MX" /> |
| |
|
|
533 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
534 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
535 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
536 |
</xs:restriction> |
| |
|
|
537 |
</xs:simpleContent> |
| |
|
|
538 |
</xs:complexType> |
| |
|
|
539 |
</xs:element> |
| |
| |
|
-+ |
541 |
<xs:element name="tumor_stage" nillable="true"> |
| |
|
|
542 |
<xs:complexType> |
| |
|
|
543 |
<xs:simpleContent> |
| |
|
|
544 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
545 |
<xs:enumeration value="" /> |
| |
|
|
546 |
<xs:enumeration value="Stage I" /> |
| |
|
|
547 |
<xs:enumeration value="Stage IA" /> |
| |
|
|
548 |
<xs:enumeration value="Stage IB" /> |
| |
|
|
549 |
<xs:enumeration value="Stage II" /> |
| |
|
|
550 |
<xs:enumeration value="Stage IIA" /> |
| |
|
|
551 |
<xs:enumeration value="Stage IIB" /> |
| |
|
|
552 |
<xs:enumeration value="Stage III" /> |
| |
|
|
553 |
<xs:enumeration value="Stage IIIA" /> |
| |
|
|
554 |
<xs:enumeration value="Stage IIIB" /> |
| |
|
|
555 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
556 |
<xs:attribute name="cde" type="xs:string" default="3065862" /> |
| |
|
|
557 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
558 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
559 |
</xs:restriction> |
| |
|
|
560 |
</xs:simpleContent> |
| |
|
|
561 |
</xs:complexType> |
| |
|
|
562 |
</xs:element> |
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:lusc_luad_shared="http://tcga.nci/bcr/xml/clinical/shared/lusc_luad/2.5" |
|
|
|
| 10 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 11 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 12 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 13 |
xmlns:follow_up_v1.0="http://tcga.nci/bcr/xml/clinical/lusc/followup/2.5/1.0" |
|
|
|
| 14 |
xmlns="http://tcga.nci/bcr/xml/clinical/lusc/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/lusc/2.4" |
| 15 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/lusc/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/lusc/2.4" |
| |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 39 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/lusc/followup/2.5/1.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/lusc/followup/2.5/TCGA_BCR.LUSC_Clinical_FollowUp_v1.0.xsd" /> |
|
|
|
| 40 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/lusc_luad/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_LUSC_LUAD_Elements.xsd" /> |
|
|
|
| |
| 49 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 57 |
<xs:element ref="lusc_luad_shared:histological_type" /> |
<> |
49 |
<xs:element ref="histological_type" /> |
| |
| 142 |
<xs:element ref="lusc_luad_shared:tumor_stage" /> |
<> |
135 |
<xs:element ref="tumor_stage" /> |
| 143 |
<xs:element ref="lusc_luad_shared:primary_tumor_pathologic_spread" /> |
|
136 |
<xs:element ref="primary_tumor_pathologic_spread" /> |
| 144 |
<xs:element ref="lusc_luad_shared:lymphnode_pathologic_spread" /> |
|
137 |
<xs:element ref="lymphnode_pathologic_spread" /> |
| 145 |
<xs:element ref="lusc_luad_shared:distant_metastasis_pathologic_spread" /> |
|
138 |
<xs:element ref="distant_metastasis_pathologic_spread" /> |
| 146 |
<xs:element ref="shared:karnofsky_performance_score" /> |
|
139 |
<xs:element ref="karnofsky_performance_score" /> |
| 147 |
<xs:element ref="shared:eastern_cancer_oncology_group" /> |
|
140 |
<xs:element ref="eastern_cancer_oncology_group" /> |
| 148 |
<xs:element ref="lusc_luad_shared:tobacco_smoking_history_indicator" /> |
|
141 |
<xs:element ref="tobacco_smoking_history_indicator" /> |
| 149 |
<xs:element ref="lusc_luad_shared:year_of_tobacco_smoking_onset" /> |
|
142 |
<xs:element ref="year_of_tobacco_smoking_onset" /> |
| 150 |
<xs:element ref="shared:stopped_smoking_year" /> |
|
143 |
<xs:element ref="year_of_tobacco_smoking_cessation" /> |
| 151 |
<xs:element ref="shared:number_pack_years_smoked" /> |
|
144 |
<xs:element ref="number_pack_years_smoked" /> |
| 152 |
<xs:element ref="shared:anatomic_organ_subdivision" /> |
|
145 |
<xs:element ref="anatomic_organ_subdivision" /> |
| 153 |
<xs:element ref="lusc_luad_shared:diagnosis" /> |
|
146 |
<xs:element ref="diagnosis" /> |
| 154 |
<xs:element ref="lusc_luad_shared:location_in_lung_parenchyma" /> |
|
147 |
<xs:element ref="location_in_lung_parenchyma" /> |
| 155 |
<xs:element ref="shared:residual_tumor" /> |
|
148 |
<xs:element ref="residual_tumor" /> |
| 156 |
<xs:element ref="lusc_luad_shared:kras_mutation_found" /> |
|
149 |
<xs:element ref="kras_mutation_found" /> |
| 157 |
<xs:element ref="lusc_luad_shared:kras_gene_analysis_performed" /> |
|
150 |
<xs:element ref="kras_gene_analysis_performed" /> |
| 158 |
<xs:element ref="lusc_luad_shared:kras_mutation_result" /> |
|
151 |
<xs:element ref="kras_mutation_result" /> |
| 159 |
<xs:element ref="lusc_luad_shared:egfr_mutation_performed" /> |
|
152 |
<xs:element ref="egfr_mutation_performed" /> |
| 160 |
<xs:element ref="lusc_luad_shared:egfr_mutation_result" /> |
|
153 |
<xs:element ref="egfr_mutation_result" /> |
| 161 |
<xs:element ref="lusc_luad_shared:eml4_alk_translocation_performed" /> |
|
154 |
<xs:element ref="eml4_alk_translocation_performed" /> |
| 162 |
<xs:element ref="lusc_luad_shared:eml4_alk_translocation_result" /> |
|
155 |
<xs:element ref="eml4_alk_translocation_result" /> |
| 163 |
<xs:element ref="lusc_luad_shared:eml4_alk_translocation_method" /> |
|
156 |
<xs:element ref="eml4_alk_translocation_method" /> |
| |
| 166 |
|
<> |
159 |
</xs:sequence> |
| |
|
|
160 |
</xs:complexType> |
| |
|
|
161 |
</xs:element> |
| |
| 167 |
<xs:element ref="lusc_luad_shared:clinical_cqcf" /> |
<> |
163 |
<xs:element name="egfr_mutation_result" nillable="true"> |
| 168 |
|
|
164 |
<xs:complexType mixed="true"> |
| |
|
|
165 |
<xs:simpleContent> |
| |
|
|
166 |
<xs:restriction base="utility:clinical_res_attributes"> |
| 169 |
<xs:element name="follow_ups"> |
|
167 |
<xs:enumeration value="" /> |
| |
|
|
168 |
<xs:enumeration value="G719X" /> |
| |
|
|
169 |
<xs:enumeration value="Exon 19 Deletion" /> |
| |
|
|
170 |
<xs:enumeration value="Exon 20 Insertion" /> |
| |
|
|
171 |
<xs:enumeration value="T790M" /> |
| |
|
|
172 |
<xs:enumeration value="L858R" /> |
| |
|
|
173 |
<xs:enumeration value="L861Q" /> |
| |
|
|
174 |
<xs:enumeration value="Other" /> |
| |
|
|
175 |
<xs:attribute name="cde" type="xs:string" default="3147627" /> |
| |
|
|
176 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
177 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
178 |
</xs:restriction> |
| |
|
|
179 |
</xs:simpleContent> |
| |
|
|
180 |
</xs:complexType> |
| |
|
|
181 |
</xs:element> |
| |
| |
|
<> |
183 |
<xs:element name="eml4_alk_translocation_result" nillable="true"> |
| |
|
|
184 |
<xs:complexType mixed="true"> |
| 170 |
<xs:annotation> |
|
185 |
<xs:simpleContent> |
| 171 |
<xs:documentation>We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
186 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
187 |
<xs:enumeration value="" /> |
| |
|
|
188 |
<xs:enumeration value="Variant 1" /> |
| |
|
|
189 |
<xs:enumeration value="Variant 2" /> |
| |
|
|
190 |
<xs:enumeration value="Variant 3" /> |
| |
|
|
191 |
<xs:enumeration value="Variant 4" /> |
| |
|
|
192 |
<xs:enumeration value="Variant 5" /> |
| |
|
|
193 |
<xs:attribute name="cde" type="xs:string" default="3139445" /> |
| |
|
|
194 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
195 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
196 |
</xs:restriction> |
| |
|
|
197 |
</xs:simpleContent> |
| |
|
|
198 |
</xs:complexType> |
| |
|
|
199 |
</xs:element> |
| |
| |
|
-+ |
201 |
<xs:element name="eml4_alk_translocation_method" nillable="true"> |
| |
|
|
202 |
<xs:complexType mixed="true"> |
| |
|
|
203 |
<xs:simpleContent> |
| |
|
|
204 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
205 |
<xs:enumeration value="" /> |
| |
|
|
206 |
<xs:enumeration value="IHC" /> |
| |
|
|
207 |
<xs:enumeration value="FISH" /> |
| |
|
|
208 |
<xs:enumeration value="RT-PCR" /> |
| |
|
|
209 |
<xs:enumeration value="Other" /> |
| |
|
|
210 |
<xs:attribute name="cde" type="xs:string" default="3139449" /> |
| |
|
|
211 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
212 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
213 |
</xs:restriction> |
| |
|
|
214 |
</xs:simpleContent> |
| |
|
|
215 |
</xs:complexType> |
| |
|
|
216 |
</xs:element> |
| |
| |
|
<> |
218 |
<xs:element name="egfr_mutation_performed" nillable="true"> |
| |
|
|
219 |
<xs:complexType> |
| |
|
|
220 |
<xs:simpleContent> |
| |
|
|
221 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
222 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
223 |
<xs:attribute name="cde" type="xs:string" default="3139429" /> |
| |
|
|
224 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
225 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 172 |
</xs:annotation> |
|
226 |
</xs:extension> |
| |
|
|
227 |
</xs:simpleContent> |
| |
|
|
228 |
</xs:complexType> |
| |
|
|
229 |
</xs:element> |
| |
| |
|
-+ |
231 |
<xs:element name="eml4_alk_translocation_performed" nillable="true"> |
| |
| |
|
<> |
233 |
<xs:simpleContent> |
| |
|
|
234 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
235 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
236 |
<xs:attribute name="cde" type="xs:string" default="3139437" /> |
| |
|
|
237 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
238 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
239 |
</xs:extension> |
| |
|
|
240 |
</xs:simpleContent> |
| |
|
|
241 |
</xs:complexType> |
| 174 |
<xs:sequence> |
|
242 |
</xs:element> |
| |
| |
|
-+ |
244 |
<xs:element name="histological_type" nillable="true"> |
| |
|
|
245 |
<xs:complexType mixed="true"> |
| |
|
|
246 |
<xs:simpleContent> |
| |
|
|
247 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
248 |
<xs:attribute name="cde" type="xs:string" default="3081934" /> |
| |
|
|
249 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
250 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
251 |
</xs:restriction> |
| |
|
|
252 |
</xs:simpleContent> |
| |
|
|
253 |
</xs:complexType> |
| |
|
|
254 |
</xs:element> |
| |
| |
|
-+ |
256 |
<xs:element name="diagnosis" nillable="true"> |
| |
|
|
257 |
<xs:complexType mixed="true"> |
| |
|
|
258 |
<xs:simpleContent> |
| |
|
|
259 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
260 |
<xs:attribute name="cde" type="xs:string" default="3081932" /> |
| |
|
|
261 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
262 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
263 |
</xs:restriction> |
| |
|
|
264 |
</xs:simpleContent> |
| |
|
|
265 |
</xs:complexType> |
| |
|
|
266 |
</xs:element> |
| |
| |
|
-+ |
268 |
<xs:element name="location_in_lung_parenchyma" nillable="true"> |
| |
|
|
269 |
<xs:complexType mixed="true"> |
| |
|
|
270 |
<xs:simpleContent> |
| |
|
|
271 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
272 |
<xs:enumeration value="" /> |
| |
|
|
273 |
<xs:enumeration value="Peripheral Lung" /> |
| |
|
|
274 |
<xs:enumeration value="Central Lung" /> |
| |
|
|
275 |
<xs:attribute name="cde" type="xs:string" default="3139453" /> |
| |
|
|
276 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
277 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
278 |
</xs:restriction> |
| |
|
|
279 |
</xs:simpleContent> |
| |
|
|
280 |
</xs:complexType> |
| |
|
|
281 |
</xs:element> |
| |
| |
|
-+ |
283 |
<xs:element name="anatomic_organ_subdivision" nillable="true"> |
| |
|
|
284 |
<xs:complexType mixed="true"> |
| |
|
|
285 |
<xs:simpleContent> |
| |
|
|
286 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
287 |
<xs:enumeration value="" /> |
| |
|
|
288 |
<xs:enumeration value="R-Upper" /> |
| |
|
|
289 |
<xs:enumeration value="R-Middle" /> |
| |
|
|
290 |
<xs:enumeration value="R-Lower" /> |
| |
|
|
291 |
<xs:enumeration value="L-Upper" /> |
| |
|
|
292 |
<xs:enumeration value="L-Lower" /> |
| |
|
|
293 |
<xs:enumeration value="Bronchial" /> |
| |
|
|
294 |
<xs:enumeration value="Mediastinal" /> |
| |
|
|
295 |
<xs:attribute name="cde" type="xs:string" default="2008006" /> |
| |
|
|
296 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
297 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
298 |
</xs:restriction> |
| |
|
|
299 |
</xs:simpleContent> |
| |
|
|
300 |
</xs:complexType> |
| |
|
|
301 |
</xs:element> |
| |
| |
|
-+ |
303 |
<xs:element name="kras_mutation_result" nillable="true"> |
| |
|
|
304 |
<xs:complexType mixed="true"> |
| |
|
|
305 |
<xs:simpleContent> |
| |
|
|
306 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
307 |
<xs:enumeration value="" /> |
| |
|
|
308 |
<xs:enumeration value="G12A" /> |
| |
|
|
309 |
<xs:enumeration value="G12C" /> |
| |
|
|
310 |
<xs:enumeration value="G12D" /> |
| |
|
|
311 |
<xs:enumeration value="G12R" /> |
| |
|
|
312 |
<xs:enumeration value="G12S" /> |
| |
|
|
313 |
<xs:enumeration value="G12V" /> |
| |
|
|
314 |
<xs:enumeration value="G13D" /> |
| |
|
|
315 |
<xs:enumeration value="Other" /> |
| |
|
|
316 |
<xs:attribute name="cde" type="xs:string" default="3147614" /> |
| |
|
|
317 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
318 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
319 |
</xs:restriction> |
| |
|
|
320 |
</xs:simpleContent> |
| |
|
|
321 |
</xs:complexType> |
| |
|
|
322 |
</xs:element> |
| |
| |
|
-+ |
324 |
<xs:element name="number_pack_years_smoked" nillable="true"> |
| |
|
|
325 |
<xs:complexType mixed="true"> |
| |
|
|
326 |
<xs:simpleContent> |
| |
|
|
327 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
328 |
<xs:attribute name="cde" type="xs:string" default="2955385" /> |
| |
|
|
329 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
330 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
331 |
</xs:restriction> |
| |
|
|
332 |
</xs:simpleContent> |
| |
|
|
333 |
</xs:complexType> |
| |
|
|
334 |
</xs:element> |
| |
| |
|
-+ |
336 |
<xs:element name="tobacco_smoking_history_indicator" nillable="true"> |
| |
|
|
337 |
<xs:complexType> |
| |
|
|
338 |
<xs:simpleContent> |
| |
|
|
339 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
340 |
<xs:enumeration value="" /> |
| |
|
|
341 |
<xs:enumeration value="Lifelong Non-smoker" /> |
| |
|
|
342 |
<xs:enumeration value="Current smoker" /> |
| |
|
|
343 |
<xs:enumeration value="Current reformed smoker for > 15 years" /> |
| |
|
|
344 |
<xs:enumeration value="Current reformed smoker for < or = 15 years" /> |
| |
|
|
345 |
<xs:attribute name="cde" type="xs:string" default="2181650" /> |
| |
|
|
346 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
347 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
348 |
</xs:restriction> |
| |
|
|
349 |
</xs:simpleContent> |
| |
|
|
350 |
</xs:complexType> |
| |
|
|
351 |
</xs:element> |
| |
| 175 |
<xs:element ref="follow_up_v1.0:follow_up_v1.0" minOccurs="0" maxOccurs="unbounded" /> |
<> |
353 |
<xs:element name="year_of_tobacco_smoking_onset" nillable="true"> |
| |
|
|
354 |
<xs:complexType mixed="true"> |
| |
|
|
355 |
<xs:simpleContent> |
| |
|
|
356 |
<xs:extension base="utility:generic_year"> |
| |
|
|
357 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
358 |
<xs:attribute name="cde" type="xs:string" default="2228604" /> |
| |
|
|
359 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
360 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
361 |
</xs:extension> |
| |
|
|
362 |
</xs:simpleContent> |
| |
|
|
363 |
</xs:complexType> |
| 176 |
</xs:sequence> |
|
364 |
</xs:element> |
| |
| |
|
-+ |
366 |
<xs:element name="year_of_tobacco_smoking_cessation" nillable="true"> |
| |
|
|
367 |
<xs:complexType mixed="true"> |
| |
|
|
368 |
<xs:simpleContent> |
| |
|
|
369 |
<xs:extension base="utility:generic_year"> |
| |
|
|
370 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
371 |
<xs:attribute name="cde" type="xs:string" default="2228610" /> |
| |
|
|
372 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
373 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
374 |
</xs:extension> |
| |
|
|
375 |
</xs:simpleContent> |
| |
| |
|
<> |
379 |
<xs:element name="kras_mutation_found" nillable="true"> |
| |
|
|
380 |
<xs:complexType> |
| |
|
|
381 |
<xs:simpleContent> |
| |
|
|
382 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
383 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
384 |
<xs:attribute name="cde" type="xs:string" default="2932340" /> |
| |
|
|
385 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
386 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
387 |
</xs:extension> |
| |
|
|
388 |
</xs:simpleContent> |
| |
|
|
389 |
</xs:complexType> |
| 179 |
</xs:sequence> |
|
390 |
</xs:element> |
| |
| |
|
-+ |
392 |
<xs:element name="kras_gene_analysis_performed" nillable="true"> |
| |
|
|
393 |
<xs:complexType> |
| |
|
|
394 |
<xs:simpleContent> |
| |
|
|
395 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
396 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
397 |
<xs:attribute name="cde" type="xs:string" default="3123147" /> |
| |
|
|
398 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
399 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
400 |
</xs:extension> |
| |
|
|
401 |
</xs:simpleContent> |
| |
| |
|
-+ |
405 |
<xs:element name="residual_tumor" nillable="true"> |
| |
|
|
406 |
<xs:complexType> |
| |
|
|
407 |
<xs:simpleContent> |
| |
|
|
408 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
409 |
<xs:enumeration value="" /> |
| |
|
|
410 |
<xs:enumeration value="RX" /> |
| |
|
|
411 |
<xs:enumeration value="R0" /> |
| |
|
|
412 |
<xs:enumeration value="R1" /> |
| |
|
|
413 |
<xs:enumeration value="R2" /> |
| |
|
|
414 |
<xs:attribute name="cde" type="xs:string" default="2608702" /> |
| |
|
|
415 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
416 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
417 |
</xs:restriction> |
| |
|
|
418 |
</xs:simpleContent> |
| |
|
|
419 |
</xs:complexType> |
| |
|
|
420 |
</xs:element> |
| |
| |
|
-+ |
422 |
<xs:element name="primary_therapy_outcome_success" nillable="true"> |
| |
|
|
423 |
<xs:complexType> |
| |
|
|
424 |
<xs:simpleContent> |
| |
|
|
425 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
426 |
<xs:enumeration value="" /> |
| |
|
|
427 |
<xs:enumeration value="PROGRESSIVE DISEASE" /> |
| |
|
|
428 |
<xs:enumeration value="STABLE DISEASE" /> |
| |
|
|
429 |
<xs:enumeration value="PARTIAL RESPONSE" /> |
| |
|
|
430 |
<xs:enumeration value="COMPLETE RESPONSE" /> |
| |
|
|
431 |
<xs:attribute name="cde" type="xs:string" default="2786727" /> |
| |
|
|
432 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
433 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
434 |
</xs:restriction> |
| |
|
|
435 |
</xs:simpleContent> |
| |
|
|
436 |
</xs:complexType> |
| |
|
|
437 |
</xs:element> |
| |
| |
|
-+ |
439 |
<xs:element name="karnofsky_performance_score"> |
| |
|
|
440 |
<xs:complexType> |
| |
|
|
441 |
<xs:simpleContent> |
| |
|
|
442 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
443 |
<xs:enumeration value="" /> |
| |
|
|
444 |
<xs:enumeration value="0" /> |
| |
|
|
445 |
<xs:enumeration value="10" /> |
| |
|
|
446 |
<xs:enumeration value="20" /> |
| |
|
|
447 |
<xs:enumeration value="30" /> |
| |
|
|
448 |
<xs:enumeration value="40" /> |
| |
|
|
449 |
<xs:enumeration value="50" /> |
| |
|
|
450 |
<xs:enumeration value="60" /> |
| |
|
|
451 |
<xs:enumeration value="70" /> |
| |
|
|
452 |
<xs:enumeration value="80" /> |
| |
|
|
453 |
<xs:enumeration value="90" /> |
| |
|
|
454 |
<xs:enumeration value="100" /> |
| |
|
|
455 |
<xs:attribute name="cde" type="xs:string" default="2003853" /> |
| |
|
|
456 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
457 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
458 |
</xs:restriction> |
| |
|
|
459 |
</xs:simpleContent> |
| |
|
|
460 |
</xs:complexType> |
| |
|
|
461 |
</xs:element> |
| |
| |
|
-+ |
463 |
<xs:element name="eastern_cancer_oncology_group"> |
| |
|
|
464 |
<xs:complexType> |
| |
|
|
465 |
<xs:simpleContent> |
| |
|
|
466 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
467 |
<xs:enumeration value="" /> |
| |
|
|
468 |
<xs:enumeration value="0" /> |
| |
|
|
469 |
<xs:enumeration value="1" /> |
| |
|
|
470 |
<xs:enumeration value="2" /> |
| |
|
|
471 |
<xs:enumeration value="3" /> |
| |
|
|
472 |
<xs:enumeration value="4" /> |
| |
|
|
473 |
<xs:attribute name="cde" type="xs:string" default="88" /> |
| |
|
|
474 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
475 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
476 |
</xs:restriction> |
| |
|
|
477 |
</xs:simpleContent> |
| |
|
|
478 |
</xs:complexType> |
| |
|
|
479 |
</xs:element> |
| |
| |
|
-+ |
481 |
<xs:element name="primary_tumor_pathologic_spread" nillable="true"> |
| |
|
|
482 |
<xs:complexType> |
| |
|
|
483 |
<xs:simpleContent> |
| |
|
|
484 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
485 |
<xs:enumeration value="" /> |
| |
|
|
486 |
<xs:enumeration value="TX" /> |
| |
|
|
487 |
<xs:enumeration value="T0" /> |
| |
|
|
488 |
<xs:enumeration value="Tis" /> |
| |
|
|
489 |
<xs:enumeration value="T1" /> |
| |
|
|
490 |
<xs:enumeration value="T1a" /> |
| |
|
|
491 |
<xs:enumeration value="T1b" /> |
| |
|
|
492 |
<xs:enumeration value="T2" /> |
| |
|
|
493 |
<xs:enumeration value="T2a" /> |
| |
|
|
494 |
<xs:enumeration value="T2b" /> |
| |
|
|
495 |
<xs:enumeration value="T3" /> |
| |
|
|
496 |
<xs:enumeration value="T4" /> |
| |
|
|
497 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
498 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
499 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
500 |
</xs:restriction> |
| |
|
|
501 |
</xs:simpleContent> |
| |
|
|
502 |
</xs:complexType> |
| |
|
|
503 |
</xs:element> |
| |
| |
|
-+ |
505 |
<xs:element name="lymphnode_pathologic_spread" nillable="true"> |
| |
|
|
506 |
<xs:complexType> |
| |
|
|
507 |
<xs:simpleContent> |
| |
|
|
508 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
509 |
<xs:enumeration value="" /> |
| |
|
|
510 |
<xs:enumeration value="NX" /> |
| |
|
|
511 |
<xs:enumeration value="N0" /> |
| |
|
|
512 |
<xs:enumeration value="N1" /> |
| |
|
|
513 |
<xs:enumeration value="N2" /> |
| |
|
|
514 |
<xs:enumeration value="N3" /> |
| |
|
|
515 |
<xs:attribute name="cde" type="xs:string" default="3065858" /> |
| |
|
|
516 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
517 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
518 |
</xs:restriction> |
| |
|
|
519 |
</xs:simpleContent> |
| |
|
|
520 |
</xs:complexType> |
| |
|
|
521 |
</xs:element> |
| |
| |
|
-+ |
523 |
<xs:element name="distant_metastasis_pathologic_spread" nillable="true"> |
| |
|
|
524 |
<xs:complexType> |
| |
|
|
525 |
<xs:simpleContent> |
| |
|
|
526 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
527 |
<xs:enumeration value="" /> |
| |
|
|
528 |
<xs:enumeration value="M0" /> |
| |
|
|
529 |
<xs:enumeration value="M1" /> |
| |
|
|
530 |
<xs:enumeration value="M1a" /> |
| |
|
|
531 |
<xs:enumeration value="M1b" /> |
| |
|
|
532 |
<xs:enumeration value="MX" /> |
| |
|
|
533 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
534 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
535 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
536 |
</xs:restriction> |
| |
|
|
537 |
</xs:simpleContent> |
| |
|
|
538 |
</xs:complexType> |
| |
|
|
539 |
</xs:element> |
| |
| |
|
-+ |
541 |
<xs:element name="tumor_stage" nillable="true"> |
| |
|
|
542 |
<xs:complexType> |
| |
|
|
543 |
<xs:simpleContent> |
| |
|
|
544 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
545 |
<xs:enumeration value="" /> |
| |
|
|
546 |
<xs:enumeration value="Stage I" /> |
| |
|
|
547 |
<xs:enumeration value="Stage IA" /> |
| |
|
|
548 |
<xs:enumeration value="Stage IB" /> |
| |
|
|
549 |
<xs:enumeration value="Stage II" /> |
| |
|
|
550 |
<xs:enumeration value="Stage IIA" /> |
| |
|
|
551 |
<xs:enumeration value="Stage IIB" /> |
| |
|
|
552 |
<xs:enumeration value="Stage III" /> |
| |
|
|
553 |
<xs:enumeration value="Stage IIIA" /> |
| |
|
|
554 |
<xs:enumeration value="Stage IIIB" /> |
| |
|
|
555 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
556 |
<xs:attribute name="cde" type="xs:string" default="3065862" /> |
| |
|
|
557 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
558 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
559 |
</xs:restriction> |
| |
|
|
560 |
</xs:simpleContent> |
| |
|
|
561 |
</xs:complexType> |
| |
|
|
562 |
</xs:element> |
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 11 |
xmlns:follow_up_v1.0="http://tcga.nci/bcr/xml/clinical/ov/followup/2.5/1.0" |
|
|
|
| 12 |
xmlns="http://tcga.nci/bcr/xml/clinical/ov/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/ov/2.4" |
| 13 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/ov/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/ov/2.4" |
| |
| 29 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 30 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/ov/followup/2.5/1.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/ov/followup/2.5/TCGA_BCR.OV_Clinical_FollowUp_v1.0.xsd" /> |
|
|
|
| |
| 43 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 51 |
<xs:element ref="shared:tumor_histologic_subtype" /> |
<> |
49 |
<xs:element ref="histological_type" /> |
| |
| |
|
-+ |
89 |
<xs:element ref="radiation_therapy" /> |
| |
| |
|
<> |
109 |
<xs:element ref="shared:chemo_therapy" /> |
| |
|
|
110 |
<xs:element ref="shared:immuno_therapy" /> |
| |
|
|
111 |
<xs:element ref="shared:hormonal_therapy" /> |
| 99 |
<xs:element ref="shared:person_neoplasm_cancer_status" /> |
|
112 |
<xs:element ref="shared:targeted_molecular_therapy" /> |
| |
| 102 |
<xs:element ref="shared:day_of_form_completion" /> |
<> |
116 |
<xs:element ref="shared:day_of_tumor_progression" /> |
| 103 |
<xs:element ref="shared:month_of_form_completion" /> |
|
117 |
<xs:element ref="shared:month_of_tumor_progression" /> |
| 104 |
<xs:element ref="shared:year_of_form_completion" /> |
|
118 |
<xs:element ref="shared:year_of_tumor_progression" /> |
| |
| 106 |
<xs:element ref="shared:days_to_form_completion" /> |
<> |
121 |
<xs:element ref="shared:days_to_tumor_progression" /> |
| |
| 108 |
<xs:element ref="shared:ethnicity" /> |
+- |
|
|
| |
| |
|
<> |
124 |
<xs:choice> |
| |
|
|
125 |
<xs:sequence> |
| 110 |
<xs:element ref="shared:gynecologic_figo_staging_system" /> |
|
126 |
<xs:element ref="shared:day_of_tumor_recurrence" /> |
| 111 |
|
|
127 |
<xs:element ref="shared:month_of_tumor_recurrence" /> |
| |
| 113 |
<xs:element ref="shared:karnofsky_performance_score" /> |
<> |
128 |
<xs:element ref="shared:year_of_tumor_recurrence" /> |
| |
|
|
129 |
</xs:sequence> |
| |
| 114 |
<xs:element ref="shared:eastern_cancer_oncology_group" /> |
<> |
131 |
<xs:element ref="shared:days_to_tumor_recurrence" /> |
| |
|
|
132 |
</xs:choice> |
| |
| |
|
<> |
134 |
<xs:element ref="shared:ethnicity" /> |
| 115 |
<xs:element ref="shared:performance_status_scale_timing" /> |
|
135 |
<xs:element ref="site_of_tumor_first_recurrence" /> |
| |
| 117 |
<xs:element ref="shared:neoplasm_histologic_grade" /> |
<> |
137 |
<xs:element ref="tumor_grade" /> |
| 118 |
<xs:element ref="shared:residual_tumor" /> |
|
138 |
<xs:element ref="residual_tumor" /> |
| |
| |
|
-+ |
140 |
<xs:element ref="primary_therapy_outcome_success" /> |
| |
| |
|
-+ |
143 |
<xs:element ref="additional_chemo_therapy" /> |
| |
|
|
144 |
<xs:element ref="additional_immuno_therapy" /> |
| |
| 123 |
<xs:element ref="shared:anatomic_organ_subdivision" /> |
<> |
146 |
<xs:element ref="additional_drug_therapy" /> |
| 124 |
<xs:element ref="shared:initial_pathologic_diagnosis_method" /> |
|
147 |
<xs:element ref="anatomic_organ_subdivision" /> |
| 125 |
<xs:element ref="shared:venous_invasion" /> |
|
148 |
<xs:element ref="initial_pathologic_diagnosis_method" /> |
| 126 |
<xs:element ref="shared:lymphatic_invasion" /> |
|
149 |
<xs:element ref="shared:person_neoplasm_cancer_status" /> |
| 127 |
<xs:element ref="rx:drugs" /> |
|
150 |
<xs:element ref="drugs" /> |
| 128 |
<xs:element ref="rad:radiations" /> |
|
151 |
<xs:element ref="radiations" /> |
| |
| 130 |
<xs:element name="follow_ups"> |
<> |
152 |
<xs:element ref="examinations" /> |
| 131 |
<xs:annotation> |
|
|
|
| 132 |
<xs:documentation>We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
|
|
| 133 |
</xs:annotation> |
|
|
|
| 134 |
<xs:complexType> |
|
|
|
| 135 |
<xs:sequence> |
|
153 |
<xs:element ref="surgeries" /> |
| 136 |
<xs:element ref="follow_up_v1.0:follow_up_v1.0" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| |
| |
|
<> |
158 |
<xs:element name="histological_type" nillable="true"> |
| |
|
|
159 |
<xs:complexType mixed="true"> |
| |
|
|
160 |
<xs:simpleContent> |
| |
|
|
161 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
162 |
<xs:attribute name="cde" type="xs:string" default="2831122" /> |
| |
|
|
163 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
164 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 141 |
</xs:sequence> |
|
165 |
</xs:restriction> |
| |
|
|
166 |
</xs:simpleContent> |
| |
| 145 |
<xs:element name="other_method_of_initial_pathological_diagnosis" nillable="true"> |
<> |
170 |
<xs:element name="site_of_tumor_first_recurrence" nillable="true"> |
| |
| 148 |
<xs:extension base="xs:string"> |
<> |
|
|
| 149 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
173 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
174 |
<xs:enumeration value="" /> |
| |
|
|
175 |
<xs:enumeration value="LOCO-REGIONAL" /> |
| |
|
|
176 |
<xs:enumeration value="METASTASIS" /> |
| |
|
|
177 |
<xs:enumeration value="LOCOREGIONAL AND METASTASIS" /> |
| 150 |
<xs:attribute name="cde" type="xs:string" default="2757948" /> |
|
178 |
<xs:attribute name="cde" type="xs:string" default="2791194" /> |
| 151 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
179 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
| 153 |
</xs:extension> |
<> |
181 |
</xs:restriction> |
| |
| 163 |
<xs:enumeration value="I" /> |
+- |
|
|
| |
| 167 |
<xs:enumeration value="II" /> |
+- |
|
|
| |
| 171 |
<xs:enumeration value="III" /> |
+- |
|
|
| |
| |
|
-+ |
209 |
<xs:element name="tumor_grade" nillable="true"> |
| |
|
|
210 |
<xs:complexType> |
| |
|
|
211 |
<xs:simpleContent> |
| |
|
|
212 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
213 |
<xs:enumeration value="" /> |
| |
|
|
214 |
<xs:enumeration value="GX" /> |
| |
|
|
215 |
<xs:enumeration value="GB" /> |
| |
|
|
216 |
<xs:enumeration value="G1" /> |
| |
|
|
217 |
<xs:enumeration value="G2" /> |
| |
|
|
218 |
<xs:enumeration value="G3" /> |
| |
|
|
219 |
<xs:enumeration value="G4" /> |
| |
|
|
220 |
<xs:attribute name="cde" type="xs:string" default="2785839" /> |
| |
|
|
221 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
222 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
223 |
</xs:restriction> |
| |
|
|
224 |
</xs:simpleContent> |
| |
|
|
225 |
</xs:complexType> |
| |
|
|
226 |
</xs:element> |
| |
| |
|
-+ |
228 |
<xs:element name="residual_tumor" nillable="true"> |
| |
|
|
229 |
<xs:complexType> |
| |
|
|
230 |
<xs:simpleContent> |
| |
|
|
231 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
232 |
<xs:enumeration value="" /> |
| |
|
|
233 |
<xs:enumeration value="RX" /> |
| |
|
|
234 |
<xs:enumeration value="R0" /> |
| |
|
|
235 |
<xs:enumeration value="R1" /> |
| |
|
|
236 |
<xs:enumeration value="R2" /> |
| |
|
|
237 |
<xs:attribute name="cde" type="xs:string" default="2608702" /> |
| |
|
|
238 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
239 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
240 |
</xs:restriction> |
| |
|
|
241 |
</xs:simpleContent> |
| |
|
|
242 |
</xs:complexType> |
| |
|
|
243 |
</xs:element> |
| |
| |
|
-+ |
245 |
<xs:element name="primary_therapy_outcome_success" nillable="true"> |
| |
|
|
246 |
<xs:complexType> |
| |
|
|
247 |
<xs:simpleContent> |
| |
|
|
248 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
249 |
<xs:enumeration value="" /> |
| |
|
|
250 |
<xs:enumeration value="PROGRESSIVE DISEASE" /> |
| |
|
|
251 |
<xs:enumeration value="STABLE DISEASE" /> |
| |
|
|
252 |
<xs:enumeration value="PARTIAL RESPONSE" /> |
| |
|
|
253 |
<xs:enumeration value="COMPLETE RESPONSE" /> |
| |
|
|
254 |
<xs:attribute name="cde" type="xs:string" default="2786727" /> |
| |
|
|
255 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
256 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
257 |
</xs:restriction> |
| |
|
|
258 |
</xs:simpleContent> |
| |
|
|
259 |
</xs:complexType> |
| |
|
|
260 |
</xs:element> |
| |
| |
|
-+ |
277 |
<xs:element name="additional_chemo_therapy" nillable="true"> |
| |
|
|
278 |
<xs:complexType> |
| |
|
|
279 |
<xs:simpleContent> |
| |
|
|
280 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
281 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
282 |
<xs:attribute name="cde" type="xs:string" default="2650626" /> |
| |
|
|
283 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
284 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
285 |
</xs:extension> |
| |
|
|
286 |
</xs:simpleContent> |
| |
|
|
287 |
</xs:complexType> |
| |
|
|
288 |
</xs:element> |
| |
| |
|
-+ |
290 |
<xs:element name="additional_immuno_therapy" nillable="true"> |
| |
|
|
291 |
<xs:complexType> |
| |
|
|
292 |
<xs:simpleContent> |
| |
|
|
293 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
294 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
295 |
<xs:attribute name="cde" type="xs:string" default="2759828" /> |
| |
|
|
296 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
297 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
298 |
</xs:extension> |
| |
|
|
299 |
</xs:simpleContent> |
| |
|
|
300 |
</xs:complexType> |
| |
|
|
301 |
</xs:element> |
| |
| |
|
-+ |
303 |
<xs:element name="additional_drug_therapy" nillable="true"> |
| |
|
|
304 |
<xs:complexType> |
| |
|
|
305 |
<xs:simpleContent> |
| |
|
|
306 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
307 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
308 |
<xs:attribute name="cde" type="xs:string" default="2786150" /> |
| |
|
|
309 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
310 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
311 |
</xs:extension> |
| |
|
|
312 |
</xs:simpleContent> |
| |
|
|
313 |
</xs:complexType> |
| |
|
|
314 |
</xs:element> |
| |
| |
|
-+ |
316 |
<xs:element name="anatomic_organ_subdivision" nillable="true"> |
| |
|
|
317 |
<xs:complexType mixed="true"> |
| |
|
|
318 |
<xs:simpleContent> |
| |
|
|
319 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
320 |
<xs:attribute name="cde" type="xs:string" default="2008006" /> |
| |
|
|
321 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
322 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
323 |
</xs:restriction> |
| |
|
|
324 |
</xs:simpleContent> |
| |
|
|
325 |
</xs:complexType> |
| |
|
|
326 |
</xs:element> |
| |
| |
|
-+ |
328 |
<xs:element name="initial_pathologic_diagnosis_method" nillable="true"> |
| |
|
|
329 |
<xs:complexType> |
| |
|
|
330 |
<xs:simpleContent> |
| |
|
|
331 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
332 |
<xs:enumeration value="" /> |
| |
|
|
333 |
<xs:enumeration value="CYTOLOGY" /> |
| |
|
|
334 |
<xs:enumeration value="FINE NEEDLE ASPIRATION BIOPSY" /> |
| |
|
|
335 |
<xs:enumeration value="INCISION BIOPSY" /> |
| |
|
|
336 |
<xs:enumeration value="EXCISIONAL BIOPSY" /> |
| |
|
|
337 |
<xs:enumeration value="TUMOR RESECTION" /> |
| |
|
|
338 |
<xs:enumeration value="OTHER METHOD, SPECIFY IN NOTES" /> |
| |
|
|
339 |
<xs:attribute name="cde" type="xs:string" default="2757941" /> |
| |
|
|
340 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
341 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
342 |
</xs:restriction> |
| |
|
|
343 |
</xs:simpleContent> |
| |
|
|
344 |
</xs:complexType> |
| |
|
|
345 |
</xs:element> |
| |
| |
|
-+ |
347 |
<xs:element name="radiation_therapy"> |
| |
|
|
348 |
<xs:complexType> |
| |
|
|
349 |
<xs:simpleContent> |
| |
|
|
350 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
351 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
352 |
<xs:attribute name="cde" type="xs:string" default="2005312" /> |
| |
|
|
353 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
354 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
355 |
</xs:extension> |
| |
|
|
356 |
</xs:simpleContent> |
| |
|
|
357 |
</xs:complexType> |
| |
|
|
358 |
</xs:element> |
| |
| |
|
-+ |
360 |
<xs:element name="drugs"> |
| |
|
|
361 |
<xs:complexType> |
| |
|
|
362 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
| |
|
|
363 |
<xs:element ref="drug" /> |
| |
|
|
364 |
</xs:sequence> |
| |
|
|
365 |
</xs:complexType> |
| |
|
|
366 |
</xs:element> |
| |
| |
|
-+ |
368 |
<xs:element name="drug"> |
| |
|
|
369 |
<xs:complexType> |
| |
|
|
370 |
<xs:sequence> |
| |
|
|
371 |
<xs:element ref="rx:bcr_drug_barcode" /> |
| |
|
|
372 |
<xs:element ref="rx:bcr_drug_uuid" /> |
| |
|
|
373 |
<xs:element ref="rx:drug_category" /> |
| |
|
|
374 |
<xs:element ref="rx:total_dose" /> |
| |
|
|
375 |
<xs:element ref="rx:total_dose_units" /> |
| |
|
|
376 |
<xs:element ref="rx:number_cycles" /> |
| |
| |
|
-+ |
378 |
<xs:choice> |
| |
|
|
379 |
<xs:sequence> |
| |
|
|
380 |
<xs:element ref="rx:day_of_drug_therapy_start" /> |
| |
|
|
381 |
<xs:element ref="rx:month_of_drug_therapy_start" /> |
| |
|
|
382 |
<xs:element ref="rx:year_of_drug_therapy_start" /> |
| |
|
|
383 |
</xs:sequence> |
| |
| |
|
-+ |
385 |
<xs:element ref="rx:days_to_drug_therapy_start" /> |
| |
|
|
386 |
</xs:choice> |
| |
| |
|
-+ |
388 |
<xs:choice> |
| |
|
|
389 |
<xs:sequence> |
| |
|
|
390 |
<xs:element ref="rx:day_of_drug_therapy_end" /> |
| |
|
|
391 |
<xs:element ref="rx:month_of_drug_therapy_end" /> |
| |
|
|
392 |
<xs:element ref="rx:year_of_drug_therapy_end" /> |
| |
|
|
393 |
</xs:sequence> |
| |
| |
|
-+ |
395 |
<xs:element ref="rx:days_to_drug_therapy_end" /> |
| |
|
|
396 |
</xs:choice> |
| |
| |
|
-+ |
398 |
<xs:element ref="initial_course" /> |
| |
|
|
399 |
<xs:element ref="rx:drug_name" /> |
| |
|
|
400 |
<xs:element ref="shared:regimen_indication" /> |
| |
|
|
401 |
<xs:element ref="shared:regimen_indication_notes" /> |
| |
|
|
402 |
<xs:element ref="route_of_administration" /> |
| |
|
|
403 |
<xs:element ref="route_of_administration_notes" /> |
| |
|
|
404 |
<xs:element ref="rx:therapy_ongoing" /> |
| |
|
|
405 |
</xs:sequence> |
| |
|
|
406 |
</xs:complexType> |
| |
|
|
407 |
</xs:element> |
| |
| |
|
-+ |
409 |
<xs:element name="bcr_drug_barcode"> |
| |
|
|
410 |
<xs:complexType> |
| |
|
|
411 |
<xs:simpleContent> |
| |
|
|
412 |
<xs:extension base="xs:NCName"> |
| |
|
|
413 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
414 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.15" /> |
| |
|
|
415 |
</xs:extension> |
| |
|
|
416 |
</xs:simpleContent> |
| |
|
|
417 |
</xs:complexType> |
| |
|
|
418 |
</xs:element> |
| |
| |
|
-+ |
420 |
<xs:element name="number_cycles"> |
| |
|
|
421 |
<xs:complexType> |
| |
|
|
422 |
<xs:simpleContent> |
| |
|
|
423 |
<xs:extension base="xs:string"> |
| |
|
|
424 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
425 |
<xs:attribute name="cde" type="xs:string" default="62590" /> |
| |
|
|
426 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
427 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
428 |
</xs:extension> |
| |
|
|
429 |
</xs:simpleContent> |
| |
|
|
430 |
</xs:complexType> |
| |
|
|
431 |
</xs:element> |
| |
| |
|
-+ |
433 |
<xs:element name="drug_category"> |
| |
|
|
434 |
<xs:complexType> |
| |
|
|
435 |
<xs:simpleContent> |
| |
|
|
436 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
437 |
<xs:enumeration value="" /> |
| |
|
|
438 |
<xs:enumeration value="CHEMO" /> |
| |
|
|
439 |
<xs:enumeration value="HORMONAL" /> |
| |
|
|
440 |
<xs:enumeration value="IMMUNO" /> |
| |
|
|
441 |
<xs:enumeration value="TARGETED" /> |
| |
|
|
442 |
<xs:attribute name="cde" type="xs:string" default="729" /> |
| |
|
|
443 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
444 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
445 |
</xs:restriction> |
| |
|
|
446 |
</xs:simpleContent> |
| |
|
|
447 |
</xs:complexType> |
| |
|
|
448 |
</xs:element> |
| |
| |
|
-+ |
450 |
<xs:element name="initial_course"> |
| |
|
|
451 |
<xs:complexType> |
| |
|
|
452 |
<xs:simpleContent> |
| |
|
|
453 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
454 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
455 |
<xs:attribute name="cde" type="xs:string" default="2003586" /> |
| |
|
|
456 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
457 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
458 |
</xs:extension> |
| |
|
|
459 |
</xs:simpleContent> |
| |
|
|
460 |
</xs:complexType> |
| |
|
|
461 |
</xs:element> |
| |
| |
|
-+ |
463 |
<xs:element name="route_of_administration"> |
| |
|
|
464 |
<xs:complexType> |
| |
|
|
465 |
<xs:simpleContent> |
| |
|
|
466 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
467 |
<xs:enumeration value="" /> |
| |
|
|
468 |
<xs:enumeration value="ORAL" /> |
| |
|
|
469 |
<xs:enumeration value="INTRAVENOUS (IV)" /> |
| |
|
|
470 |
<xs:enumeration value="INTRATUMORAL" /> |
| |
|
|
471 |
<xs:enumeration value="INTRA-PERITONEAL (IP)" /> |
| |
|
|
472 |
<xs:enumeration value="IV AND IP" /> |
| |
|
|
473 |
<xs:enumeration value="OTHER: SPECIFY IN NOTES" /> |
| |
|
|
474 |
<xs:attribute name="cde" type="xs:string" default="2003586" /> |
| |
|
|
475 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
476 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
477 |
</xs:restriction> |
| |
|
|
478 |
</xs:simpleContent> |
| |
|
|
479 |
</xs:complexType> |
| |
|
|
480 |
</xs:element> |
| |
| |
|
-+ |
482 |
<xs:element name="route_of_administration_notes"> |
| |
|
|
483 |
<xs:complexType mixed="true"> |
| |
|
|
484 |
<xs:simpleContent> |
| |
|
|
485 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
486 |
<xs:attribute name="cde" type="xs:string" default="2190504" /> |
| |
|
|
487 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
488 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
489 |
</xs:restriction> |
| |
|
|
490 |
</xs:simpleContent> |
| |
|
|
491 |
</xs:complexType> |
| |
|
|
492 |
</xs:element> |
| |
| |
|
-+ |
494 |
<xs:element name="radiations"> |
| |
|
|
495 |
<xs:complexType> |
| |
|
|
496 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
| |
|
|
497 |
<xs:element ref="radiation" /> |
| |
|
|
498 |
</xs:sequence> |
| |
|
|
499 |
</xs:complexType> |
| |
|
|
500 |
</xs:element> |
| |
| |
|
-+ |
502 |
<xs:element name="radiation"> |
| |
|
|
503 |
<xs:complexType> |
| |
|
|
504 |
<xs:sequence> |
| |
|
|
505 |
<xs:element ref="rad:bcr_radiation_barcode" /> |
| |
|
|
506 |
<xs:element ref="rad:bcr_radiation_uuid"/> |
| |
| |
|
-+ |
508 |
<xs:choice> |
| |
|
|
509 |
<xs:sequence> |
| |
|
|
510 |
<xs:element ref="rad:day_of_radiation_therapy_start" /> |
| |
|
|
511 |
<xs:element ref="rad:month_of_radiation_therapy_start" /> |
| |
|
|
512 |
<xs:element ref="rad:year_of_radiation_therapy_start" /> |
| |
|
|
513 |
</xs:sequence> |
| |
| |
|
-+ |
515 |
<xs:element ref="rad:days_to_radiation_therapy_start" /> |
| |
|
|
516 |
</xs:choice> |
| |
| |
|
-+ |
518 |
<xs:choice> |
| |
|
|
519 |
<xs:sequence> |
| |
|
|
520 |
<xs:element ref="rad:day_of_radiation_therapy_end" /> |
| |
|
|
521 |
<xs:element ref="rad:month_of_radiation_therapy_end" /> |
| |
|
|
522 |
<xs:element ref="rad:year_of_radiation_therapy_end" /> |
| |
|
|
523 |
</xs:sequence> |
| |
| |
|
-+ |
525 |
<xs:element ref="rad:days_to_radiation_therapy_end" /> |
| |
|
|
526 |
</xs:choice> |
| |
| |
|
-+ |
528 |
<xs:element ref="rad:radiation_type" /> |
| |
|
|
529 |
<xs:element ref="rad:radiation_type_notes" /> |
| |
|
|
530 |
<xs:element ref="rad:radiation_dosage" /> |
| |
|
|
531 |
<xs:element ref="rad:units" /> |
| |
|
|
532 |
<xs:element ref="rad:numfractions" /> |
| |
|
|
533 |
<xs:element ref="anatomic_treatment_site" /> |
| |
|
|
534 |
<xs:element ref="shared:regimen_indication" /> |
| |
|
|
535 |
<xs:element ref="shared:regimen_indication_notes" /> |
| |
|
|
536 |
<xs:element ref="rad:radiation_treatment_ongoing" /> |
| |
|
|
537 |
</xs:sequence> |
| |
|
|
538 |
</xs:complexType> |
| |
|
|
539 |
</xs:element> |
| |
| |
|
-+ |
541 |
<xs:element name="bcr_radiation_barcode"> |
| |
|
|
542 |
<xs:complexType> |
| |
|
|
543 |
<xs:simpleContent> |
| |
|
|
544 |
<xs:extension base="xs:NCName"> |
| |
|
|
545 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
546 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.15" /> |
| |
|
|
547 |
</xs:extension> |
| |
|
|
548 |
</xs:simpleContent> |
| |
|
|
549 |
</xs:complexType> |
| |
|
|
550 |
</xs:element> |
| |
| |
|
-+ |
552 |
<xs:element name="radiation_treatment_ongoing" nillable="true"> |
| |
|
|
553 |
<xs:complexType> |
| |
|
|
554 |
<xs:simpleContent> |
| |
|
|
555 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
556 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
557 |
<xs:attribute name="cde" type="xs:string" default="2842745" /> |
| |
|
|
558 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
559 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
560 |
</xs:extension> |
| |
|
|
561 |
</xs:simpleContent> |
| |
|
|
562 |
</xs:complexType> |
| |
|
|
563 |
</xs:element> |
| |
| |
|
-+ |
565 |
<xs:element name="anatomic_treatment_site"> |
| |
|
|
566 |
<xs:complexType> |
| |
|
|
567 |
<xs:simpleContent> |
| |
|
|
568 |
<xs:extension base="xs:string"> |
| |
|
|
569 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
570 |
<xs:attribute name="cde" type="xs:string" default="2793522" /> |
| |
|
|
571 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
572 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
573 |
</xs:extension> |
| |
|
|
574 |
</xs:simpleContent> |
| |
|
|
575 |
</xs:complexType> |
| |
|
|
576 |
</xs:element> |
| |
| |
|
-+ |
578 |
<xs:element name="examinations"> |
| |
|
|
579 |
<xs:complexType> |
| |
|
|
580 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
| |
|
|
581 |
<xs:element ref="examination" /> |
| |
|
|
582 |
</xs:sequence> |
| |
|
|
583 |
</xs:complexType> |
| |
|
|
584 |
</xs:element> |
| |
| |
|
-+ |
586 |
<xs:element name="examination"> |
| |
|
|
587 |
<xs:complexType> |
| |
|
|
588 |
<xs:sequence> |
| |
|
|
589 |
<xs:element ref="bcr_examination_barcode" /> |
| |
|
|
590 |
<xs:element ref="karnofsky_performance_score" /> |
| |
|
|
591 |
<xs:element ref="eastern_cancer_oncology_group" /> |
| |
|
|
592 |
<xs:element ref="progression_status" /> |
| |
|
|
593 |
<xs:element ref="shared:performance_status_scale_timing" /> |
| |
|
|
594 |
<xs:element ref="shared:progression_determined_by" /> |
| |
|
|
595 |
<xs:element ref="shared:progression_determined_by_notes" /> |
| |
|
|
596 |
</xs:sequence> |
| |
|
|
597 |
</xs:complexType> |
| |
|
|
598 |
</xs:element> |
| |
| |
|
-+ |
600 |
<xs:element name="bcr_examination_barcode"> |
| |
|
|
601 |
<xs:complexType> |
| |
|
|
602 |
<xs:simpleContent> |
| |
|
|
603 |
<xs:extension base="xs:NCName"> |
| |
|
|
604 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
605 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.15" /> |
| |
|
|
606 |
</xs:extension> |
| |
|
|
607 |
</xs:simpleContent> |
| |
|
|
608 |
</xs:complexType> |
| |
|
|
609 |
</xs:element> |
| |
| |
|
-+ |
611 |
<xs:element name="karnofsky_performance_score"> |
| |
|
|
612 |
<xs:complexType> |
| |
|
|
613 |
<xs:simpleContent> |
| |
|
|
614 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
615 |
<xs:enumeration value="" /> |
| |
|
|
616 |
<xs:enumeration value="0" /> |
| |
|
|
617 |
<xs:enumeration value="10" /> |
| |
|
|
618 |
<xs:enumeration value="20" /> |
| |
|
|
619 |
<xs:enumeration value="30" /> |
| |
|
|
620 |
<xs:enumeration value="40" /> |
| |
|
|
621 |
<xs:enumeration value="50" /> |
| |
|
|
622 |
<xs:enumeration value="60" /> |
| |
|
|
623 |
<xs:enumeration value="70" /> |
| |
|
|
624 |
<xs:enumeration value="80" /> |
| |
|
|
625 |
<xs:enumeration value="90" /> |
| |
|
|
626 |
<xs:enumeration value="100" /> |
| |
|
|
627 |
<xs:attribute name="cde" type="xs:string" default="2003853" /> |
| |
|
|
628 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
629 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
630 |
</xs:restriction> |
| |
|
|
631 |
</xs:simpleContent> |
| |
|
|
632 |
</xs:complexType> |
| |
|
|
633 |
</xs:element> |
| |
| |
|
-+ |
635 |
<xs:element name="eastern_cancer_oncology_group"> |
| |
|
|
636 |
<xs:complexType> |
| |
|
|
637 |
<xs:simpleContent> |
| |
|
|
638 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
639 |
<xs:enumeration value="" /> |
| |
|
|
640 |
<xs:enumeration value="0" /> |
| |
|
|
641 |
<xs:enumeration value="1" /> |
| |
|
|
642 |
<xs:enumeration value="2" /> |
| |
|
|
643 |
<xs:enumeration value="3" /> |
| |
|
|
644 |
<xs:enumeration value="4" /> |
| |
|
|
645 |
<xs:enumeration value="5" /> |
| |
|
|
646 |
<xs:attribute name="cde" type="xs:string" default="88" /> |
| |
|
|
647 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
648 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
649 |
</xs:restriction> |
| |
|
|
650 |
</xs:simpleContent> |
| |
|
|
651 |
</xs:complexType> |
| |
|
|
652 |
</xs:element> |
| |
| |
|
-+ |
654 |
<xs:element name="progression_status"> |
| |
|
|
655 |
<xs:complexType> |
| |
|
|
656 |
<xs:simpleContent> |
| |
|
|
657 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
658 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
659 |
<xs:attribute name="cde" type="xs:string" default="2673787" /> |
| |
|
|
660 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
661 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
662 |
</xs:extension> |
| |
|
|
663 |
</xs:simpleContent> |
| |
|
|
664 |
</xs:complexType> |
| |
|
|
665 |
</xs:element> |
| |
| |
|
-+ |
679 |
</xs:restriction> |
| |
|
|
680 |
</xs:simpleContent> |
| |
|
|
681 |
</xs:complexType> |
| |
|
|
682 |
</xs:element> |
| |
| |
|
-+ |
684 |
<xs:element name="progression_determined_by"> |
| |
|
|
685 |
<xs:complexType> |
| |
|
|
686 |
<xs:simpleContent> |
| |
|
|
687 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
688 |
<xs:enumeration value="" /> |
| |
|
|
689 |
<xs:enumeration value="LABORATORY" /> |
| |
|
|
690 |
<xs:enumeration value="PATHOLOGY" /> |
| |
|
|
691 |
<xs:enumeration value="RADIATION" /> |
| |
|
|
692 |
<xs:enumeration value="PHYSICAL EXAMINATION" /> |
| |
|
|
693 |
<xs:enumeration value="IMAGING STUDY" /> |
| |
|
|
694 |
<xs:enumeration value="MOLECULAR MARKER(S)" /> |
| |
|
|
695 |
<xs:enumeration value="FIRST SEEN AT FURTHER SURGERY" /> |
| |
|
|
696 |
<xs:enumeration value="OTHER METHOD: SPECIFY IN NOTES" /> |
| |
|
|
697 |
<xs:attribute name="cde" type="xs:string" default="2786205" /> |
| |
|
|
698 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
699 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
700 |
</xs:restriction> |
| |
|
|
701 |
</xs:simpleContent> |
| |
|
|
702 |
</xs:complexType> |
| |
|
|
703 |
</xs:element> |
| |
| |
|
-+ |
705 |
<xs:element name="progression_determined_by_notes"> |
| |
|
|
706 |
<xs:complexType mixed="true"> |
| |
|
|
707 |
<xs:simpleContent> |
| |
|
|
708 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
709 |
<xs:attribute name="cde" type="xs:string" default="2786210" /> |
| |
|
|
710 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
711 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
712 |
</xs:restriction> |
| |
|
|
713 |
</xs:simpleContent> |
| |
|
|
714 |
</xs:complexType> |
| |
|
|
715 |
</xs:element> |
| |
| |
|
-+ |
717 |
<xs:element name="surgeries"> |
| |
|
|
718 |
<xs:complexType> |
| |
|
|
719 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
| |
|
|
720 |
<xs:element ref="surgery" /> |
| |
|
|
721 |
</xs:sequence> |
| |
|
|
722 |
</xs:complexType> |
| |
|
|
723 |
</xs:element> |
| |
| |
|
-+ |
725 |
<xs:element name="surgery"> |
| |
|
|
726 |
<xs:complexType> |
| |
|
|
727 |
<xs:sequence> |
| |
|
|
728 |
<xs:element ref="bcr_surgery_barcode" /> |
| |
| |
|
-+ |
730 |
<xs:choice> |
| |
|
|
731 |
<xs:sequence> |
| |
|
|
732 |
<xs:element ref="day_of_procedure" /> |
| |
|
|
733 |
<xs:element ref="month_of_procedure" /> |
| |
|
|
734 |
<xs:element ref="year_of_procedure" /> |
| |
|
|
735 |
</xs:sequence> |
| |
| |
|
-+ |
737 |
<xs:element ref="days_to_procedure" /> |
| |
|
|
738 |
</xs:choice> |
| |
| |
|
-+ |
740 |
<xs:element ref="procedure_type" /> |
| |
|
|
741 |
</xs:sequence> |
| |
|
|
742 |
</xs:complexType> |
| |
|
|
743 |
</xs:element> |
| |
| |
|
-+ |
745 |
<xs:element name="bcr_surgery_barcode"> |
| |
|
|
746 |
<xs:complexType> |
| |
|
|
747 |
<xs:simpleContent> |
| |
|
|
748 |
<xs:extension base="xs:NCName"> |
| |
|
|
749 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
750 |
<xs:attribute name="cde" type="xs:string" default="2003586" /> |
| |
|
|
751 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
| |
|
|
752 |
</xs:extension> |
| |
|
|
753 |
</xs:simpleContent> |
| |
|
|
754 |
</xs:complexType> |
| |
|
|
755 |
</xs:element> |
| |
| |
|
-+ |
757 |
<xs:element name="day_of_procedure"> |
| |
|
|
758 |
<xs:complexType mixed="true"> |
| |
|
|
759 |
<xs:simpleContent> |
| |
|
|
760 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
761 |
<xs:attribute name="cde" type="xs:string" default="2896965" /> |
| |
|
|
762 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
763 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
764 |
</xs:restriction> |
| |
|
|
765 |
</xs:simpleContent> |
| |
|
|
766 |
</xs:complexType> |
| |
|
|
767 |
</xs:element> |
| |
| |
|
-+ |
769 |
<xs:element name="month_of_procedure"> |
| |
|
|
770 |
<xs:complexType mixed="true"> |
| |
|
|
771 |
<xs:simpleContent> |
| |
|
|
772 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
773 |
<xs:attribute name="cde" type="xs:string" default="2896963" /> |
| |
|
|
774 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
775 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
776 |
</xs:restriction> |
| |
|
|
777 |
</xs:simpleContent> |
| |
|
|
778 |
</xs:complexType> |
| |
|
|
779 |
</xs:element> |
| |
| |
|
-+ |
781 |
<xs:element name="year_of_procedure"> |
| |
|
|
782 |
<xs:complexType mixed="true"> |
| |
|
|
783 |
<xs:simpleContent> |
| |
|
|
784 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
785 |
<xs:attribute name="cde" type="xs:string" default="2896985" /> |
| |
|
|
786 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.12" /> |
| |
|
|
787 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
788 |
</xs:restriction> |
| |
|
|
789 |
</xs:simpleContent> |
| |
|
|
790 |
</xs:complexType> |
| |
|
|
791 |
</xs:element> |
| |
| |
|
-+ |
793 |
<xs:element name="procedure_type"> |
| |
|
|
794 |
<xs:complexType mixed="true"> |
| |
|
|
795 |
<xs:simpleContent> |
| |
|
|
796 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
797 |
<xs:attribute name="cde" type="xs:string" default="2199761" /> |
| |
|
|
798 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
799 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
800 |
</xs:restriction> |
| |
|
|
801 |
</xs:simpleContent> |
| |
|
|
802 |
</xs:complexType> |
| |
|
|
803 |
</xs:element> |
| |
| |
|
-+ |
805 |
<xs:element name="days_to_drug_treatment_start"> |
| |
|
|
806 |
<xs:complexType mixed="true"> |
| |
|
|
807 |
<xs:simpleContent> |
| |
|
|
808 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
809 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
810 |
<xs:attribute name="xsd_ver" type="xs:string" default="" /> |
| |
|
|
811 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
812 |
</xs:restriction> |
| |
|
|
813 |
</xs:simpleContent> |
| |
|
|
814 |
</xs:complexType> |
| |
|
|
815 |
</xs:element> |
| |
| |
|
-+ |
817 |
<xs:element name="days_to_drug_treatment_end"> |
| |
|
|
818 |
<xs:complexType mixed="true"> |
| |
|
|
819 |
<xs:simpleContent> |
| |
|
|
820 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
821 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
822 |
<xs:attribute name="xsd_ver" type="xs:string" default="" /> |
| |
|
|
823 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
824 |
</xs:restriction> |
| |
|
|
825 |
</xs:simpleContent> |
| |
|
|
826 |
</xs:complexType> |
| |
|
|
827 |
</xs:element> |
| |
| |
|
-+ |
829 |
<xs:element name="days_to_radiation_treatment_start"> |
| |
|
|
830 |
<xs:complexType mixed="true"> |
| |
|
|
831 |
<xs:simpleContent> |
| |
|
|
832 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
833 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
834 |
<xs:attribute name="xsd_ver" type="xs:string" default="" /> |
| |
|
|
835 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
836 |
</xs:restriction> |
| |
|
|
837 |
</xs:simpleContent> |
| |
|
|
838 |
</xs:complexType> |
| |
|
|
839 |
</xs:element> |
| |
| |
|
-+ |
841 |
<xs:element name="days_to_radiation_treatment_end"> |
| |
|
|
842 |
<xs:complexType mixed="true"> |
| |
|
|
843 |
<xs:simpleContent> |
| |
|
|
844 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
845 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
846 |
<xs:attribute name="xsd_ver" type="xs:string" default="" /> |
| |
|
|
847 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
848 |
</xs:restriction> |
| |
|
|
849 |
</xs:simpleContent> |
| |
|
|
850 |
</xs:complexType> |
| |
|
|
851 |
</xs:element> |
| |
| |
|
-+ |
853 |
<xs:element name="days_to_procedure"> |
| |
|
|
854 |
<xs:complexType mixed="true"> |
| |
|
|
855 |
<xs:simpleContent> |
| |
|
|
856 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
857 |
<xs:attribute name="cde" type="xs:string" default="" /> |
| |
|
|
858 |
<xs:attribute name="xsd_ver" type="xs:string" default="" /> |
| |
|
|
859 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:coad_read_shared="http://tcga.nci/bcr/xml/clinical/shared/coad_read/2.5" |
|
|
|
| 10 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 11 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 12 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 13 |
xmlns:follow_up_v1.0="http://tcga.nci/bcr/xml/clinical/read/followup/2.5/1.0" |
|
|
|
| 14 |
xmlns="http://tcga.nci/bcr/xml/clinical/read/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/read/2.4" |
| 15 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/read/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/read/2.4" |
| |
| 31 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/read/followup/2.5/1.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/read/followup/2.5/TCGA_BCR.READ_Clinical_FollowUp_v1.0.xsd" /> |
|
|
|
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/coad_read/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_COAD_READ_Elements.xsd" /> |
|
|
|
| |
| 48 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 56 |
<xs:element ref="coad_read_shared:histological_type" /> |
<> |
49 |
<xs:element ref="histological_type" /> |
| |
| 140 |
<xs:element ref="shared:residual_tumor" /> |
+- |
|
|
| 141 |
<xs:element ref="shared:anatomic_organ_subdivision" /> |
|
|
|
| 142 |
<xs:element ref="shared:primary_lymph_node_presentation_assessment" /> |
|
|
|
| 143 |
<xs:element ref="shared:lymph_node_examined_count" /> |
|
|
|
| 144 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_he" /> |
|
|
|
| 145 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_ihc" /> |
|
|
|
| |
| 149 |
<xs:element ref="coad_read_shared:tumor_stage" /> |
<> |
136 |
<xs:element ref="tumor_stage" /> |
| |
|
|
137 |
<xs:element ref="residual_tumor" /> |
| |
|
|
138 |
<xs:element ref="anatomic_organ_subdivision" /> |
| |
|
|
139 |
<xs:element ref="lymphnodes_examined" /> |
| |
|
|
140 |
<xs:element ref="number_of_lymphnodes_examined" /> |
| |
|
|
141 |
<xs:element ref="number_of_lymphnodes_positive_by_he" /> |
| |
|
|
142 |
<xs:element ref="number_of_lymphnodes_positive_by_ihc" /> |
| 150 |
<xs:element ref="coad_read_shared:primary_tumor_pathologic_spread" /> |
|
143 |
<xs:element ref="primary_tumor_pathologic_spread" /> |
| 151 |
<xs:element ref="coad_read_shared:lymphnode_pathologic_spread" /> |
|
144 |
<xs:element ref="lymphnode_pathologic_spread" /> |
| 152 |
<xs:element ref="coad_read_shared:distant_metastasis_pathologic_spread" /> |
|
145 |
<xs:element ref="distant_metastasis_pathologic_spread" /> |
| 153 |
<xs:element ref="coad_read_shared:preoperative_pretreatment_cea_level" /> |
|
146 |
<xs:element ref="preoperative_pretreatment_cea_level" /> |
| 154 |
<xs:element ref="coad_read_shared:non_nodal_tumor_deposits" /> |
|
147 |
<xs:element ref="non_nodal_tumor_deposits" /> |
| 155 |
<xs:element ref="coad_read_shared:circumferential_resection_margin" /> |
|
148 |
<xs:element ref="circumferential_resection_margin" /> |
| 156 |
<xs:element ref="shared:venous_invasion" /> |
|
149 |
<xs:element ref="vascular_invasion_present" /> |
| 157 |
<xs:element ref="shared:lymphatic_invasion" /> |
|
150 |
<xs:element ref="lymphatic_invasion_present" /> |
| 158 |
<xs:element ref="coad_read_shared:perineural_invasion_present" /> |
|
151 |
<xs:element ref="perineural_invasion_present" /> |
| 159 |
<xs:element ref="coad_read_shared:microsatellite_instability" /> |
|
152 |
<xs:element ref="microsatellite_instability" /> |
| 160 |
<xs:element ref="coad_read_shared:number_of_loci_tested" /> |
|
153 |
<xs:element ref="number_of_loci_tested" /> |
| 161 |
<xs:element ref="coad_read_shared:number_of_abnormal_loci" /> |
|
154 |
<xs:element ref="number_of_abnormal_loci" /> |
| 162 |
<xs:element ref="coad_read_shared:kras_gene_analysis_performed" /> |
|
155 |
<xs:element ref="kras_gene_analysis_performed" /> |
| 163 |
<xs:element ref="coad_read_shared:kras_mutation_found" /> |
|
156 |
<xs:element ref="kras_mutation_found" /> |
| 164 |
<xs:element ref="coad_read_shared:kras_mutation_codon" /> |
|
157 |
<xs:element ref="kras_mutation_codon" /> |
| 165 |
<xs:element ref="coad_read_shared:braf_gene_analysis_performed" /> |
|
158 |
<xs:element ref="braf_gene_analysis_performed" /> |
| 166 |
<xs:element ref="coad_read_shared:braf_gene_analysis_result" /> |
|
159 |
<xs:element ref="braf_gene_analysis_result" /> |
| 167 |
<xs:element ref="coad_read_shared:synchronous_colon_cancer_present" /> |
|
160 |
<xs:element ref="synchronous_colon_cancer_present" /> |
| 168 |
<xs:element ref="coad_read_shared:history_of_colon_polyps" /> |
|
161 |
<xs:element ref="history_of_colon_polyps" /> |
| 169 |
<xs:element ref="coad_read_shared:colon_polyps_present" /> |
|
162 |
<xs:element ref="colon_polyps_present" /> |
| 170 |
<xs:element ref="coad_read_shared:loss_expression_of_mismatch_repair_proteins_by_ihc" /> |
|
163 |
<xs:element ref="loss_expression_of_mismatch_repair_proteins_by_ihc" /> |
| 171 |
<xs:element ref="coad_read_shared:loss_expression_of_mismatch_repair_proteins_by_ihc_results" /> |
|
164 |
<xs:element ref="loss_expression_of_mismatch_repair_proteins_by_ihc_results" /> |
| 172 |
<xs:element ref="coad_read_shared:number_of_first_degree_relatives_with_cancer_diagnosis" /> |
|
165 |
<xs:element ref="number_of_first_degree_relatives_with_cancer_diagnosis" /> |
| |
| 176 |
|
<> |
168 |
</xs:sequence> |
| |
|
|
169 |
</xs:complexType> |
| |
|
|
170 |
</xs:element> |
| |
| 177 |
<xs:element ref="coad_read_shared:clinical_cqcf" /> |
<> |
172 |
<xs:element name="lymphnodes_examined" nillable="true"> |
| |
|
|
173 |
<xs:complexType> |
| |
|
|
174 |
<xs:simpleContent> |
| |
|
|
175 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
176 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
177 |
<xs:attribute name="cde" type="xs:string" default="2200396" /> |
| |
|
|
178 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
179 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
180 |
</xs:extension> |
| |
|
|
181 |
</xs:simpleContent> |
| |
|
|
182 |
</xs:complexType> |
| |
|
|
183 |
</xs:element> |
| |
| |
|
<> |
185 |
<xs:element name="number_of_abnormal_loci" nillable="true"> |
| 179 |
<xs:element name="follow_ups"> |
|
186 |
<xs:complexType mixed="true"> |
| 180 |
<xs:annotation> |
|
187 |
<xs:simpleContent> |
| |
|
|
188 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
189 |
<xs:attribute name="cde" type="xs:string" default="3107129" /> |
| |
|
|
190 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
191 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
192 |
</xs:restriction> |
| |
|
|
193 |
</xs:simpleContent> |
| |
|
|
194 |
</xs:complexType> |
| |
|
|
195 |
</xs:element> |
| |
| 181 |
<xs:documentation>We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
<> |
197 |
<xs:element name="number_of_first_degree_relatives_with_cancer_diagnosis" nillable="true"> |
| |
|
|
198 |
<xs:complexType mixed="true"> |
| |
|
|
199 |
<xs:simpleContent> |
| |
|
|
200 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
201 |
<xs:attribute name="cde" type="xs:string" default="3107205" /> |
| |
|
|
202 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
203 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
204 |
</xs:restriction> |
| 182 |
</xs:annotation> |
|
205 |
</xs:simpleContent> |
| |
|
|
206 |
</xs:complexType> |
| |
|
|
207 |
</xs:element> |
| |
| |
|
-+ |
209 |
<xs:element name="loss_expression_of_mismatch_repair_proteins_by_ihc_results"> |
| |
| 184 |
<xs:sequence> |
<> |
|
|
| 185 |
<xs:element ref="follow_up_v1.0:follow_up_v1.0" minOccurs="0" maxOccurs="unbounded" /> |
|
211 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
| |
|
|
212 |
<xs:element ref="loss_expression_of_mismatch_repair_proteins_by_ihc_result" /> |
| |
| |
|
<> |
217 |
<xs:element name="loss_expression_of_mismatch_repair_proteins_by_ihc_result" nillable="true"> |
| |
|
|
218 |
<xs:complexType mixed="true"> |
| |
|
|
219 |
<xs:simpleContent> |
| |
|
|
220 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
221 |
<xs:enumeration value="" /> |
| |
|
|
222 |
<xs:enumeration value="MLH1 Expressed" /> |
| |
|
|
223 |
<xs:enumeration value="MLH1 Not Expressed" /> |
| |
|
|
224 |
<xs:enumeration value="MSH2 Expressed" /> |
| |
|
|
225 |
<xs:enumeration value="MSH2 Not Expressed" /> |
| |
|
|
226 |
<xs:enumeration value="PMS2 Expressed" /> |
| |
|
|
227 |
<xs:enumeration value="PMS2 Not Expressed" /> |
| |
|
|
228 |
<xs:enumeration value="MSH6 Expressed" /> |
| |
|
|
229 |
<xs:enumeration value="MSH6 Not Expressed" /> |
| |
|
|
230 |
<xs:attribute name="cde" type="xs:string" default="3105496" /> |
| |
|
|
231 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
232 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
233 |
</xs:restriction> |
| |
|
|
234 |
</xs:simpleContent> |
| |
|
|
235 |
</xs:complexType> |
| 190 |
</xs:sequence> |
|
236 |
</xs:element> |
| |
| |
|
-+ |
238 |
<xs:element name="braf_gene_analysis_result" nillable="true"> |
| |
|
|
239 |
<xs:complexType mixed="true"> |
| |
|
|
240 |
<xs:simpleContent> |
| |
|
|
241 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
242 |
<xs:enumeration value="" /> |
| |
|
|
243 |
<xs:enumeration value="Normal" /> |
| |
|
|
244 |
<xs:enumeration value="Abnormal" /> |
| |
|
|
245 |
<xs:attribute name="cde" type="xs:string" default="3107189" /> |
| |
|
|
246 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
247 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
248 |
</xs:restriction> |
| |
|
|
249 |
</xs:simpleContent> |
| |
| |
|
-+ |
253 |
<xs:element name="loss_expression_of_mismatch_repair_proteins_by_ihc" nillable="true"> |
| |
|
|
254 |
<xs:complexType> |
| |
|
|
255 |
<xs:simpleContent> |
| |
|
|
256 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
257 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
258 |
<xs:attribute name="cde" type="xs:string" default="3123153" /> |
| |
|
|
259 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
260 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
261 |
</xs:extension> |
| |
|
|
262 |
</xs:simpleContent> |
| |
|
|
263 |
</xs:complexType> |
| |
|
|
264 |
</xs:element> |
| |
| |
|
-+ |
266 |
<xs:element name="braf_gene_analysis_performed" nillable="true"> |
| |
|
|
267 |
<xs:complexType> |
| |
|
|
268 |
<xs:simpleContent> |
| |
|
|
269 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
270 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
271 |
<xs:attribute name="cde" type="xs:string" default="3123151" /> |
| |
|
|
272 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
273 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
274 |
</xs:extension> |
| |
|
|
275 |
</xs:simpleContent> |
| |
|
|
276 |
</xs:complexType> |
| |
|
|
277 |
</xs:element> |
| |
| |
|
-+ |
279 |
<xs:element name="number_of_loci_tested" nillable="true"> |
| |
|
|
280 |
<xs:complexType mixed="true"> |
| |
|
|
281 |
<xs:simpleContent> |
| |
|
|
282 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
283 |
<xs:attribute name="cde" type="xs:string" default="3107127" /> |
| |
|
|
284 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
285 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
286 |
</xs:restriction> |
| |
|
|
287 |
</xs:simpleContent> |
| |
|
|
288 |
</xs:complexType> |
| |
|
|
289 |
</xs:element> |
| |
| |
|
-+ |
291 |
<xs:element name="kras_mutation_codon" nillable="true"> |
| |
|
|
292 |
<xs:complexType mixed="true"> |
| |
|
|
293 |
<xs:simpleContent> |
| |
|
|
294 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
295 |
<xs:enumeration value="" /> |
| |
|
|
296 |
<xs:enumeration value="12" /> |
| |
|
|
297 |
<xs:enumeration value="13" /> |
| |
|
|
298 |
<xs:enumeration value="61" /> |
| |
|
|
299 |
<xs:attribute name="cde" type="xs:string" default="3124509" /> |
| |
|
|
300 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
301 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
302 |
</xs:restriction> |
| |
|
|
303 |
</xs:simpleContent> |
| |
|
|
304 |
</xs:complexType> |
| |
|
|
305 |
</xs:element> |
| |
| |
|
-+ |
307 |
<xs:element name="kras_mutation_found" nillable="true"> |
| |
|
|
308 |
<xs:complexType> |
| |
|
|
309 |
<xs:simpleContent> |
| |
|
|
310 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
311 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
312 |
<xs:attribute name="cde" type="xs:string" default="2932340" /> |
| |
|
|
313 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
314 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
315 |
</xs:extension> |
| |
|
|
316 |
</xs:simpleContent> |
| |
|
|
317 |
</xs:complexType> |
| |
|
|
318 |
</xs:element> |
| |
| |
|
-+ |
320 |
<xs:element name="kras_gene_analysis_performed" nillable="true"> |
| |
|
|
321 |
<xs:complexType> |
| |
|
|
322 |
<xs:simpleContent> |
| |
|
|
323 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
324 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
325 |
<xs:attribute name="cde" type="xs:string" default="3123147" /> |
| |
|
|
326 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
327 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
328 |
</xs:extension> |
| |
|
|
329 |
</xs:simpleContent> |
| |
|
|
330 |
</xs:complexType> |
| |
|
|
331 |
</xs:element> |
| |
| |
|
-+ |
333 |
<xs:element name="number_of_lymphnodes_positive_by_he" nillable="true"> |
| |
|
|
334 |
<xs:complexType mixed="true"> |
| |
|
|
335 |
<xs:simpleContent> |
| |
|
|
336 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
337 |
<xs:attribute name="cde" type="xs:string" default="3086388" /> |
| |
|
|
338 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
339 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
340 |
</xs:restriction> |
| |
|
|
341 |
</xs:simpleContent> |
| |
|
|
342 |
</xs:complexType> |
| |
|
|
343 |
</xs:element> |
| |
| |
|
-+ |
345 |
<xs:element name="preoperative_pretreatment_cea_level" nillable="true"> |
| |
|
|
346 |
<xs:complexType mixed="true"> |
| |
|
|
347 |
<xs:simpleContent> |
| |
|
|
348 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
349 |
<xs:attribute name="cde" type="xs:string" default="2716510" /> |
| |
|
|
350 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
351 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
352 |
</xs:restriction> |
| |
|
|
353 |
</xs:simpleContent> |
| |
|
|
354 |
</xs:complexType> |
| |
|
|
355 |
</xs:element> |
| |
| |
|
-+ |
357 |
<xs:element name="non_nodal_tumor_deposits" nillable="true"> |
| |
|
|
358 |
<xs:complexType> |
| |
|
|
359 |
<xs:simpleContent> |
| |
|
|
360 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
361 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
362 |
<xs:attribute name="cde" type="xs:string" default="3107051" /> |
| |
|
|
363 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
364 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
365 |
</xs:extension> |
| |
|
|
366 |
</xs:simpleContent> |
| |
|
|
367 |
</xs:complexType> |
| |
|
|
368 |
</xs:element> |
| |
| |
|
-+ |
370 |
<xs:element name="circumferential_resection_margin" nillable="true"> |
| |
|
|
371 |
<xs:complexType mixed="true"> |
| |
|
|
372 |
<xs:simpleContent> |
| |
|
|
373 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
374 |
<xs:attribute name="cde" type="xs:string" default="64202" /> |
| |
|
|
375 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
376 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
377 |
</xs:restriction> |
| |
|
|
378 |
</xs:simpleContent> |
| |
|
|
379 |
</xs:complexType> |
| |
|
|
380 |
</xs:element> |
| |
| |
|
-+ |
382 |
<xs:element name="vascular_invasion_present" nillable="true"> |
| |
|
|
383 |
<xs:complexType> |
| |
|
|
384 |
<xs:simpleContent> |
| |
|
|
385 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
386 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
387 |
<xs:attribute name="cde" type="xs:string" default="64358" /> |
| |
|
|
388 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
389 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
390 |
</xs:extension> |
| |
|
|
391 |
</xs:simpleContent> |
| |
|
|
392 |
</xs:complexType> |
| |
|
|
393 |
</xs:element> |
| |
| |
|
-+ |
395 |
<xs:element name="lymphatic_invasion_present" nillable="true"> |
| |
|
|
396 |
<xs:complexType> |
| |
|
|
397 |
<xs:simpleContent> |
| |
|
|
398 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
399 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
400 |
<xs:attribute name="cde" type="xs:string" default="64171" /> |
| |
|
|
401 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
402 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
403 |
</xs:extension> |
| |
|
|
404 |
</xs:simpleContent> |
| |
|
|
405 |
</xs:complexType> |
| |
|
|
406 |
</xs:element> |
| |
| |
|
-+ |
408 |
<xs:element name="perineural_invasion_present" nillable="true"> |
| |
|
|
409 |
<xs:complexType> |
| |
|
|
410 |
<xs:simpleContent> |
| |
|
|
411 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
412 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
413 |
<xs:attribute name="cde" type="xs:string" default="64181" /> |
| |
|
|
414 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
415 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
416 |
</xs:extension> |
| |
|
|
417 |
</xs:simpleContent> |
| |
|
|
418 |
</xs:complexType> |
| |
|
|
419 |
</xs:element> |
| |
| |
|
-+ |
421 |
<xs:element name="microsatellite_instability" nillable="true"> |
| |
|
|
422 |
<xs:complexType> |
| |
|
|
423 |
<xs:simpleContent> |
| |
|
|
424 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
425 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
426 |
<xs:attribute name="cde" type="xs:string" default="3123142" /> |
| |
|
|
427 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
428 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
429 |
</xs:extension> |
| |
|
|
430 |
</xs:simpleContent> |
| |
|
|
431 |
</xs:complexType> |
| |
|
|
432 |
</xs:element> |
| |
| |
|
-+ |
434 |
<xs:element name="synchronous_colon_cancer_present" nillable="true"> |
| |
|
|
435 |
<xs:complexType> |
| |
|
|
436 |
<xs:simpleContent> |
| |
|
|
437 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
438 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
439 |
<xs:attribute name="cde" type="xs:string" default="2185953" /> |
| |
|
|
440 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
441 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
442 |
</xs:extension> |
| |
|
|
443 |
</xs:simpleContent> |
| |
|
|
444 |
</xs:complexType> |
| |
|
|
445 |
</xs:element> |
| |
| |
|
-+ |
447 |
<xs:element name="history_of_colon_polyps" nillable="true"> |
| |
|
|
448 |
<xs:complexType> |
| |
|
|
449 |
<xs:simpleContent> |
| |
|
|
450 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
451 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
452 |
<xs:attribute name="cde" type="xs:string" default="3107197" /> |
| |
|
|
453 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
454 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
455 |
</xs:extension> |
| |
|
|
456 |
</xs:simpleContent> |
| |
|
|
457 |
</xs:complexType> |
| |
|
|
458 |
</xs:element> |
| |
| |
|
-+ |
460 |
<xs:element name="colon_polyps_present" nillable="true"> |
| |
|
|
461 |
<xs:complexType> |
| |
|
|
462 |
<xs:simpleContent> |
| |
|
|
463 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
464 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
465 |
<xs:attribute name="cde" type="xs:string" default="64184" /> |
| |
|
|
466 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
467 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
468 |
</xs:extension> |
| |
|
|
469 |
</xs:simpleContent> |
| |
|
|
470 |
</xs:complexType> |
| |
|
|
471 |
</xs:element> |
| |
| |
|
-+ |
474 |
<xs:element name="anatomic_organ_subdivision" nillable="true"> |
| |
|
|
475 |
<xs:complexType mixed="true"> |
| |
|
|
476 |
<xs:simpleContent> |
| |
|
|
477 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
478 |
<xs:enumeration value="" /> |
| |
|
|
479 |
<xs:enumeration value="Sigmoid Colon" /> |
| |
|
|
480 |
<xs:enumeration value="Rectum" /> |
| |
|
|
481 |
<xs:enumeration value="Rectosigmoid Junction" /> |
| |
|
|
482 |
<xs:attribute name="cde" type="xs:string" default="2716417" /> |
| |
|
|
483 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
484 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
485 |
</xs:restriction> |
| |
|
|
486 |
</xs:simpleContent> |
| |
|
|
487 |
</xs:complexType> |
| |
|
|
488 |
</xs:element> |
| |
| |
|
-+ |
491 |
<xs:element name="histological_type" nillable="true"> |
| |
|
|
492 |
<xs:complexType mixed="true"> |
| |
|
|
493 |
<xs:simpleContent> |
| |
|
|
494 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
495 |
<xs:attribute name="cde" type="xs:string" default="3081934" /> |
| |
|
|
496 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
|
|
497 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
498 |
</xs:restriction> |
| |
|
|
499 |
</xs:simpleContent> |
| |
|
|
500 |
</xs:complexType> |
| |
|
|
501 |
</xs:element> |
| |
| |
|
-+ |
503 |
<xs:element name="tumor_stage" nillable="true"> |
| |
|
|
504 |
<xs:complexType> |
| |
|
|
505 |
<xs:simpleContent> |
| |
|
|
506 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
507 |
<xs:enumeration value="" /> |
| |
|
|
508 |
<xs:enumeration value="Stage I" /> |
| |
|
|
509 |
<xs:enumeration value="Stage IA" /> |
| |
|
|
510 |
<xs:enumeration value="Stage IB" /> |
| |
|
|
511 |
<xs:enumeration value="Stage II" /> |
| |
|
|
512 |
<xs:enumeration value="Stage IIA" /> |
| |
|
|
513 |
<xs:enumeration value="Stage IIB" /> |
| |
|
|
514 |
<xs:enumeration value="Stage IIC" /> |
| |
|
|
515 |
<xs:enumeration value="Stage III" /> |
| |
|
|
516 |
<xs:enumeration value="Stage IIIA" /> |
| |
|
|
517 |
<xs:enumeration value="Stage IIIB" /> |
| |
|
|
518 |
<xs:enumeration value="Stage IIIC" /> |
| |
|
|
519 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
520 |
<xs:enumeration value="Stage IVA" /> |
| |
|
|
521 |
<xs:enumeration value="Stage IVB" /> |
| |
|
|
522 |
<xs:attribute name="cde" type="xs:string" default="3065862" /> |
| |
|
|
523 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
524 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
525 |
</xs:restriction> |
| |
|
|
526 |
</xs:simpleContent> |
| |
|
|
527 |
</xs:complexType> |
| |
|
|
528 |
</xs:element> |
| |
| |
|
-+ |
530 |
<xs:element name="residual_tumor" nillable="true"> |
| |
|
|
531 |
<xs:complexType> |
| |
|
|
532 |
<xs:simpleContent> |
| |
|
|
533 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
534 |
<xs:enumeration value="" /> |
| |
|
|
535 |
<xs:enumeration value="RX" /> |
| |
|
|
536 |
<xs:enumeration value="R0" /> |
| |
|
|
537 |
<xs:enumeration value="R1" /> |
| |
|
|
538 |
<xs:enumeration value="R2" /> |
| |
|
|
539 |
<xs:attribute name="cde" type="xs:string" default="2608702" /> |
| |
|
|
540 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
541 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
542 |
</xs:restriction> |
| |
|
|
543 |
</xs:simpleContent> |
| |
|
|
544 |
</xs:complexType> |
| |
|
|
545 |
</xs:element> |
| |
| |
|
-+ |
547 |
<xs:element name="primary_tumor_pathologic_spread" nillable="true"> |
| |
|
|
548 |
<xs:complexType> |
| |
|
|
549 |
<xs:simpleContent> |
| |
|
|
550 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
551 |
<xs:enumeration value="" /> |
| |
|
|
552 |
<xs:enumeration value="TX" /> |
| |
|
|
553 |
<xs:enumeration value="Tis" /> |
| |
|
|
554 |
<xs:enumeration value="T0" /> |
| |
|
|
555 |
<xs:enumeration value="T1" /> |
| |
|
|
556 |
<xs:enumeration value="T2" /> |
| |
|
|
557 |
<xs:enumeration value="T2a" /> |
| |
|
|
558 |
<xs:enumeration value="T2b" /> |
| |
|
|
559 |
<xs:enumeration value="T3" /> |
| |
|
|
560 |
<xs:enumeration value="T4" /> |
| |
|
|
561 |
<xs:enumeration value="T4a" /> |
| |
|
|
562 |
<xs:enumeration value="T4b" /> |
| |
|
|
563 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
564 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
565 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
566 |
</xs:restriction> |
| |
|
|
567 |
</xs:simpleContent> |
| |
|
|
568 |
</xs:complexType> |
| |
|
|
569 |
</xs:element> |
| |
| |
|
-+ |
571 |
<xs:element name="lymphnode_pathologic_spread" nillable="true"> |
| |
|
|
572 |
<xs:complexType> |
| |
|
|
573 |
<xs:simpleContent> |
| |
|
|
574 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
575 |
<xs:enumeration value="" /> |
| |
|
|
576 |
<xs:enumeration value="NX" /> |
| |
|
|
577 |
<xs:enumeration value="N0" /> |
| |
|
|
578 |
<xs:enumeration value="N1" /> |
| |
|
|
579 |
<xs:enumeration value="N1a" /> |
| |
|
|
580 |
<xs:enumeration value="N1b" /> |
| |
|
|
581 |
<xs:enumeration value="N1c" /> |
| |
|
|
582 |
<xs:enumeration value="N2" /> |
| |
|
|
583 |
<xs:enumeration value="N2a" /> |
| |
|
|
584 |
<xs:enumeration value="N2b" /> |
| |
|
|
585 |
<xs:attribute name="cde" type="xs:string" default="3065858" /> |
| |
|
|
586 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
587 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
588 |
</xs:restriction> |
| |
|
|
589 |
</xs:simpleContent> |
| |
|
|
590 |
</xs:complexType> |
| |
|
|
591 |
</xs:element> |
| |
| |
|
-+ |
593 |
<xs:element name="distant_metastasis_pathologic_spread" nillable="true"> |
| |
|
|
594 |
<xs:complexType> |
| |
|
|
595 |
<xs:simpleContent> |
| |
|
|
596 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
597 |
<xs:enumeration value="" /> |
| |
|
|
598 |
<xs:enumeration value="M0" /> |
| |
|
|
599 |
<xs:enumeration value="M1" /> |
| |
|
|
600 |
<xs:enumeration value="M1a" /> |
| |
|
|
601 |
<xs:enumeration value="M1b" /> |
| |
|
|
602 |
<xs:enumeration value="MX" /> |
| |
|
|
603 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
604 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
605 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
606 |
</xs:restriction> |
| |
|
|
607 |
</xs:simpleContent> |
| |
|
|
608 |
</xs:complexType> |
| |
|
|
609 |
</xs:element> |
| |
| |
|
-+ |
611 |
<xs:element name="number_of_lymphnodes_examined" nillable="true"> |
| |
|
|
612 |
<xs:complexType mixed="true"> |
| |
|
|
613 |
<xs:simpleContent> |
| |
|
|
614 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
615 |
<xs:attribute name="cde" type="xs:string" default="3" /> |
| |
|
|
616 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
617 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
618 |
</xs:restriction> |
| |
|
|
619 |
</xs:simpleContent> |
| |
|
|
620 |
</xs:complexType> |
| |
|
|
621 |
</xs:element> |
| |
| |
|
-+ |
623 |
<xs:element name="number_of_lymphnodes_positive_by_ihc" nillable="true"> |
| |
|
|
624 |
<xs:complexType mixed="true"> |
| |
|
|
625 |
<xs:simpleContent> |
| |
|
|
626 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
627 |
<xs:attribute name="cde" type="xs:string" default="3086383" /> |
| |
|
|
628 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
629 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
630 |
</xs:restriction> |
| |
|
|
631 |
</xs:simpleContent> |
| |
|
|
632 |
</xs:complexType> |
| |
|
|
633 |
</xs:element> |
| 1 |
<?xml version="1.0" encoding="utf-8"?> |
+- |
|
|
| |
| 3 |
<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" xmlns="http://tcga.nci/bcr/xml/clinical/shared/coad_read/2.5" targetNamespace="http://tcga.nci/bcr/xml/clinical/shared/coad_read/2.5" elementFormDefault="qualified" version="2.5.0"> |
+- |
|
|
| 4 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd"/> |
|
|
|
| 5 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd"/> |
|
|
|
| 6 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd"/> |
|
|
|
| 7 |
<xs:element name="number_of_abnormal_loci" nillable="true"> |
|
|
|
| 8 |
<xs:complexType mixed="true"> |
|
|
|
| 9 |
<xs:simpleContent> |
|
|
|
| 10 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 11 |
<xs:attribute name="cde" type="xs:string" default="3107129"/> |
|
|
|
| 12 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 13 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 14 |
</xs:restriction> |
|
|
|
| 15 |
</xs:simpleContent> |
|
|
|
| 16 |
</xs:complexType> |
|
|
|
| 17 |
</xs:element> |
|
|
|
| 18 |
<xs:element name="number_of_first_degree_relatives_with_cancer_diagnosis" nillable="true"> |
|
|
|
| 19 |
<xs:complexType mixed="true"> |
|
|
|
| 20 |
<xs:simpleContent> |
|
|
|
| 21 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 22 |
<xs:attribute name="cde" type="xs:string" default="3107205"/> |
|
|
|
| 23 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 24 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 25 |
</xs:restriction> |
|
|
|
| 26 |
</xs:simpleContent> |
|
|
|
| 27 |
</xs:complexType> |
|
|
|
| 28 |
</xs:element> |
|
|
|
| 29 |
<xs:element name="loss_expression_of_mismatch_repair_proteins_by_ihc_results"> |
|
|
|
| 30 |
<xs:complexType> |
|
|
|
| 31 |
<xs:sequence minOccurs="0" maxOccurs="unbounded"> |
|
|
|
| 32 |
<xs:element ref="loss_expression_of_mismatch_repair_proteins_by_ihc_result"/> |
|
|
|
| 33 |
</xs:sequence> |
|
|
|
| 34 |
</xs:complexType> |
|
|
|
| 35 |
</xs:element> |
|
|
|
| 36 |
<xs:element name="loss_expression_of_mismatch_repair_proteins_by_ihc_result" nillable="true"> |
|
|
|
| 37 |
<xs:complexType mixed="true"> |
|
|
|
| 38 |
<xs:simpleContent> |
|
|
|
| 39 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 40 |
<xs:enumeration value=""/> |
|
|
|
| 41 |
<xs:enumeration value="MLH1 Expressed"/> |
|
|
|
| 42 |
<xs:enumeration value="MLH1 Not Expressed"/> |
|
|
|
| 43 |
<xs:enumeration value="MSH2 Expressed"/> |
|
|
|
| 44 |
<xs:enumeration value="MSH2 Not Expressed"/> |
|
|
|
| 45 |
<xs:enumeration value="PMS2 Expressed"/> |
|
|
|
| 46 |
<xs:enumeration value="PMS2 Not Expressed"/> |
|
|
|
| 47 |
<xs:enumeration value="MSH6 Expressed"/> |
|
|
|
| 48 |
<xs:enumeration value="MSH6 Not Expressed"/> |
|
|
|
| 49 |
<xs:attribute name="cde" type="xs:string" default="3105496"/> |
|
|
|
| 50 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 51 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 52 |
</xs:restriction> |
|
|
|
| 53 |
</xs:simpleContent> |
|
|
|
| 54 |
</xs:complexType> |
|
|
|
| 55 |
</xs:element> |
|
|
|
| 56 |
<xs:element name="braf_gene_analysis_result" nillable="true"> |
|
|
|
| 57 |
<xs:complexType mixed="true"> |
|
|
|
| 58 |
<xs:simpleContent> |
|
|
|
| 59 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 60 |
<xs:enumeration value=""/> |
|
|
|
| 61 |
<xs:enumeration value="Normal"/> |
|
|
|
| 62 |
<xs:enumeration value="Abnormal"/> |
|
|
|
| 63 |
<xs:attribute name="cde" type="xs:string" default="3107189"/> |
|
|
|
| 64 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 65 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 66 |
</xs:restriction> |
|
|
|
| 67 |
</xs:simpleContent> |
|
|
|
| 68 |
</xs:complexType> |
|
|
|
| 69 |
</xs:element> |
|
|
|
| 70 |
<xs:element name="loss_expression_of_mismatch_repair_proteins_by_ihc" nillable="true"> |
|
|
|
| 71 |
<xs:complexType> |
|
|
|
| 72 |
<xs:simpleContent> |
|
|
|
| 73 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 74 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 75 |
<xs:attribute name="cde" type="xs:string" default="3123153"/> |
|
|
|
| 76 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 77 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 78 |
</xs:extension> |
|
|
|
| 79 |
</xs:simpleContent> |
|
|
|
| 80 |
</xs:complexType> |
|
|
|
| 81 |
</xs:element> |
|
|
|
| 82 |
<xs:element name="braf_gene_analysis_performed" nillable="true"> |
|
|
|
| 83 |
<xs:complexType> |
|
|
|
| 84 |
<xs:simpleContent> |
|
|
|
| 85 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 86 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 87 |
<xs:attribute name="cde" type="xs:string" default="3123151"/> |
|
|
|
| 88 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 89 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 90 |
</xs:extension> |
|
|
|
| 91 |
</xs:simpleContent> |
|
|
|
| 92 |
</xs:complexType> |
|
|
|
| 93 |
</xs:element> |
|
|
|
| 94 |
<xs:element name="number_of_loci_tested" nillable="true"> |
|
|
|
| 95 |
<xs:complexType mixed="true"> |
|
|
|
| 96 |
<xs:simpleContent> |
|
|
|
| 97 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 98 |
<xs:attribute name="cde" type="xs:string" default="3107127"/> |
|
|
|
| 99 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 100 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 101 |
</xs:restriction> |
|
|
|
| 102 |
</xs:simpleContent> |
|
|
|
| 103 |
</xs:complexType> |
|
|
|
| 104 |
</xs:element> |
|
|
|
| 105 |
<xs:element name="kras_mutation_codon" nillable="true"> |
|
|
|
| 106 |
<xs:complexType mixed="true"> |
|
|
|
| 107 |
<xs:simpleContent> |
|
|
|
| 108 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 109 |
<xs:enumeration value=""/> |
|
|
|
| 110 |
<xs:enumeration value="12"/> |
|
|
|
| 111 |
<xs:enumeration value="13"/> |
|
|
|
| 112 |
<xs:enumeration value="61"/> |
|
|
|
| 113 |
<xs:attribute name="cde" type="xs:string" default="3124509"/> |
|
|
|
| 114 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 115 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 116 |
</xs:restriction> |
|
|
|
| 117 |
</xs:simpleContent> |
|
|
|
| 118 |
</xs:complexType> |
|
|
|
| 119 |
</xs:element> |
|
|
|
| 120 |
<xs:element name="kras_mutation_found" nillable="true"> |
|
|
|
| 121 |
<xs:complexType> |
|
|
|
| 122 |
<xs:simpleContent> |
|
|
|
| 123 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 124 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 125 |
<xs:attribute name="cde" type="xs:string" default="2932340"/> |
|
|
|
| 126 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 127 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 128 |
</xs:extension> |
|
|
|
| 129 |
</xs:simpleContent> |
|
|
|
| 130 |
</xs:complexType> |
|
|
|
| 131 |
</xs:element> |
|
|
|
| 132 |
<xs:element name="kras_gene_analysis_performed" nillable="true"> |
|
|
|
| 133 |
<xs:complexType> |
|
|
|
| 134 |
<xs:simpleContent> |
|
|
|
| 135 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 136 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 137 |
<xs:attribute name="cde" type="xs:string" default="3123147"/> |
|
|
|
| 138 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 139 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 140 |
</xs:extension> |
|
|
|
| 141 |
</xs:simpleContent> |
|
|
|
| 142 |
</xs:complexType> |
|
|
|
| 143 |
</xs:element> |
|
|
|
| 144 |
<xs:element name="preoperative_pretreatment_cea_level" nillable="true"> |
|
|
|
| 145 |
<xs:complexType mixed="true"> |
|
|
|
| 146 |
<xs:simpleContent> |
|
|
|
| 147 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 148 |
<xs:attribute name="cde" type="xs:string" default="2716510"/> |
|
|
|
| 149 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2"/> |
|
|
|
| 150 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 151 |
</xs:restriction> |
|
|
|
| 152 |
</xs:simpleContent> |
|
|
|
| 153 |
</xs:complexType> |
|
|
|
| 154 |
</xs:element> |
|
|
|
| 155 |
<xs:element name="non_nodal_tumor_deposits" nillable="true"> |
|
|
|
| 156 |
<xs:complexType> |
|
|
|
| 157 |
<xs:simpleContent> |
|
|
|
| 158 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 159 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 160 |
<xs:attribute name="cde" type="xs:string" default="3107051"/> |
|
|
|
| 161 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2"/> |
|
|
|
| 162 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 163 |
</xs:extension> |
|
|
|
| 164 |
</xs:simpleContent> |
|
|
|
| 165 |
</xs:complexType> |
|
|
|
| 166 |
</xs:element> |
|
|
|
| 167 |
<xs:element name="circumferential_resection_margin" nillable="true"> |
|
|
|
| 168 |
<xs:complexType mixed="true"> |
|
|
|
| 169 |
<xs:simpleContent> |
|
|
|
| 170 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 171 |
<xs:attribute name="cde" type="xs:string" default="64202"/> |
|
|
|
| 172 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2"/> |
|
|
|
| 173 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 174 |
</xs:restriction> |
|
|
|
| 175 |
</xs:simpleContent> |
|
|
|
| 176 |
</xs:complexType> |
|
|
|
| 177 |
</xs:element> |
|
|
|
| 178 |
<xs:element name="perineural_invasion_present" nillable="true"> |
|
|
|
| 179 |
<xs:complexType> |
|
|
|
| 180 |
<xs:simpleContent> |
|
|
|
| 181 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 182 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 183 |
<xs:attribute name="cde" type="xs:string" default="64181"/> |
|
|
|
| 184 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2"/> |
|
|
|
| 185 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 186 |
</xs:extension> |
|
|
|
| 187 |
</xs:simpleContent> |
|
|
|
| 188 |
</xs:complexType> |
|
|
|
| 189 |
</xs:element> |
|
|
|
| 190 |
<xs:element name="microsatellite_instability" nillable="true"> |
|
|
|
| 191 |
<xs:complexType> |
|
|
|
| 192 |
<xs:simpleContent> |
|
|
|
| 193 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 194 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 195 |
<xs:attribute name="cde" type="xs:string" default="3123142"/> |
|
|
|
| 196 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2"/> |
|
|
|
| 197 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 198 |
</xs:extension> |
|
|
|
| 199 |
</xs:simpleContent> |
|
|
|
| 200 |
</xs:complexType> |
|
|
|
| 201 |
</xs:element> |
|
|
|
| 202 |
<xs:element name="synchronous_colon_cancer_present" nillable="true"> |
|
|
|
| 203 |
<xs:complexType> |
|
|
|
| 204 |
<xs:simpleContent> |
|
|
|
| 205 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 206 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 207 |
<xs:attribute name="cde" type="xs:string" default="2185953"/> |
|
|
|
| 208 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2"/> |
|
|
|
| 209 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 210 |
</xs:extension> |
|
|
|
| 211 |
</xs:simpleContent> |
|
|
|
| 212 |
</xs:complexType> |
|
|
|
| 213 |
</xs:element> |
|
|
|
| 214 |
<xs:element name="history_of_colon_polyps" nillable="true"> |
|
|
|
| 215 |
<xs:complexType> |
|
|
|
| 216 |
<xs:simpleContent> |
|
|
|
| 217 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 218 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 219 |
<xs:attribute name="cde" type="xs:string" default="3107197"/> |
|
|
|
| 220 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2"/> |
|
|
|
| 221 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 222 |
</xs:extension> |
|
|
|
| 223 |
</xs:simpleContent> |
|
|
|
| 224 |
</xs:complexType> |
|
|
|
| 225 |
</xs:element> |
|
|
|
| 226 |
<xs:element name="colon_polyps_present" nillable="true"> |
|
|
|
| 227 |
<xs:complexType> |
|
|
|
| 228 |
<xs:simpleContent> |
|
|
|
| 229 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 230 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 231 |
<xs:attribute name="cde" type="xs:string" default="64184"/> |
|
|
|
| 232 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2"/> |
|
|
|
| 233 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 234 |
</xs:extension> |
|
|
|
| 235 |
</xs:simpleContent> |
|
|
|
| 236 |
</xs:complexType> |
|
|
|
| 237 |
</xs:element> |
|
|
|
| 238 |
<xs:element name="histological_type" nillable="true"> |
|
|
|
| 239 |
<xs:complexType mixed="true"> |
|
|
|
| 240 |
<xs:simpleContent> |
|
|
|
| 241 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 242 |
<xs:attribute name="cde" type="xs:string" default="3081934"/> |
|
|
|
| 243 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9"/> |
|
|
|
| 244 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 245 |
</xs:restriction> |
|
|
|
| 246 |
</xs:simpleContent> |
|
|
|
| 247 |
</xs:complexType> |
|
|
|
| 248 |
</xs:element> |
|
|
|
| 249 |
<xs:element name="tumor_stage" nillable="true"> |
|
|
|
| 250 |
<xs:complexType> |
|
|
|
| 251 |
<xs:simpleContent> |
|
|
|
| 252 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 253 |
<xs:enumeration value=""/> |
|
|
|
| 254 |
<xs:enumeration value="Stage I"/> |
|
|
|
| 255 |
<xs:enumeration value="Stage IA"/> |
|
|
|
| 256 |
<xs:enumeration value="Stage IB"/> |
|
|
|
| 257 |
<xs:enumeration value="Stage II"/> |
|
|
|
| 258 |
<xs:enumeration value="Stage IIA"/> |
|
|
|
| 259 |
<xs:enumeration value="Stage IIB"/> |
|
|
|
| 260 |
<xs:enumeration value="Stage IIC"/> |
|
|
|
| 261 |
<xs:enumeration value="Stage III"/> |
|
|
|
| 262 |
<xs:enumeration value="Stage IIIA"/> |
|
|
|
| 263 |
<xs:enumeration value="Stage IIIB"/> |
|
|
|
| 264 |
<xs:enumeration value="Stage IIIC"/> |
|
|
|
| 265 |
<xs:enumeration value="Stage IV"/> |
|
|
|
| 266 |
<xs:enumeration value="Stage IVA"/> |
|
|
|
| 267 |
<xs:enumeration value="Stage IVB"/> |
|
|
|
| 268 |
<xs:attribute name="cde" type="xs:string" default="3065862"/> |
|
|
|
| 269 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4"/> |
|
|
|
| 270 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 271 |
</xs:restriction> |
|
|
|
| 272 |
</xs:simpleContent> |
|
|
|
| 273 |
</xs:complexType> |
|
|
|
| 274 |
</xs:element> |
|
|
|
| 275 |
<xs:element name="primary_tumor_pathologic_spread" nillable="true"> |
|
|
|
| 276 |
<xs:complexType> |
|
|
|
| 277 |
<xs:simpleContent> |
|
|
|
| 278 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 279 |
<xs:enumeration value=""/> |
|
|
|
| 280 |
<xs:enumeration value="TX"/> |
|
|
|
| 281 |
<xs:enumeration value="Tis"/> |
|
|
|
| 282 |
<xs:enumeration value="T0"/> |
|
|
|
| 283 |
<xs:enumeration value="T1"/> |
|
|
|
| 284 |
<xs:enumeration value="T2"/> |
|
|
|
| 285 |
<xs:enumeration value="T3"/> |
|
|
|
| 286 |
<xs:enumeration value="T4a"/> |
|
|
|
| 287 |
<xs:enumeration value="T4b"/> |
|
|
|
| 288 |
<xs:attribute name="cde" type="xs:string" default="3045435"/> |
|
|
|
| 289 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1"/> |
|
|
|
| 290 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 291 |
</xs:restriction> |
|
|
|
| 292 |
</xs:simpleContent> |
|
|
|
| 293 |
</xs:complexType> |
|
|
|
| 294 |
</xs:element> |
|
|
|
| 295 |
<xs:element name="lymphnode_pathologic_spread" nillable="true"> |
|
|
|
| 296 |
<xs:complexType> |
|
|
|
| 297 |
<xs:simpleContent> |
|
|
|
| 298 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 299 |
<xs:enumeration value=""/> |
|
|
|
| 300 |
<xs:enumeration value="NX"/> |
|
|
|
| 301 |
<xs:enumeration value="N0"/> |
|
|
|
| 302 |
<xs:enumeration value="N1"/> |
|
|
|
| 303 |
<xs:enumeration value="N1a"/> |
|
|
|
| 304 |
<xs:enumeration value="N1b"/> |
|
|
|
| 305 |
<xs:enumeration value="N1c"/> |
|
|
|
| 306 |
<xs:enumeration value="N2"/> |
|
|
|
| 307 |
<xs:enumeration value="N2a"/> |
|
|
|
| 308 |
<xs:enumeration value="N2b"/> |
|
|
|
| 309 |
<xs:enumeration value="N3"/> |
|
|
|
| 310 |
<xs:attribute name="cde" type="xs:string" default="3065858"/> |
|
|
|
| 311 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1"/> |
|
|
|
| 312 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 313 |
</xs:restriction> |
|
|
|
| 314 |
</xs:simpleContent> |
|
|
|
| 315 |
</xs:complexType> |
|
|
|
| 316 |
</xs:element> |
|
|
|
| 317 |
<xs:element name="distant_metastasis_pathologic_spread" nillable="true"> |
|
|
|
| 318 |
<xs:complexType> |
|
|
|
| 319 |
<xs:simpleContent> |
|
|
|
| 320 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 321 |
<xs:enumeration value=""/> |
|
|
|
| 322 |
<xs:enumeration value="M0"/> |
|
|
|
| 323 |
<xs:enumeration value="M1"/> |
|
|
|
| 324 |
<xs:enumeration value="M1a"/> |
|
|
|
| 325 |
<xs:enumeration value="M1b"/> |
|
|
|
| 326 |
<xs:enumeration value="MX"/> |
|
|
|
| 327 |
<xs:attribute name="cde" type="xs:string" default="3045439"/> |
|
|
|
| 328 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4"/> |
|
|
|
| 329 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 330 |
</xs:restriction> |
|
|
|
| 331 |
</xs:simpleContent> |
|
|
|
| 332 |
</xs:complexType> |
|
|
|
| 333 |
</xs:element> |
|
|
|
| 334 |
<xs:element name="clinical_cqcf"> |
|
|
|
| 335 |
<xs:complexType> |
|
|
|
| 336 |
<xs:sequence> |
|
|
|
| 337 |
<xs:element ref="cqcf:frozen_specimen_anatomic_site"/> |
|
|
|
| 338 |
<xs:element ref="cqcf:history_of_prior_malignancy"/> |
|
|
|
| 339 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
|
|
| 340 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
|
|
| 341 |
<xs:choice> |
|
|
|
| 342 |
<xs:choice> |
|
|
|
| 343 |
<xs:sequence> |
|
|
|
| 344 |
<xs:element ref="cqcf:day_of_consent"/> |
|
|
|
| 345 |
<xs:element ref="cqcf:month_of_consent"/> |
|
|
|
| 346 |
<xs:element ref="cqcf:year_of_consent"/> |
|
|
|
| 347 |
</xs:sequence> |
|
|
|
| 348 |
<xs:element ref="cqcf:days_to_consent"/> |
|
|
|
| 349 |
</xs:choice> |
|
|
|
| 350 |
<xs:choice> |
|
|
|
| 351 |
<xs:sequence> |
|
|
|
| 352 |
<xs:element ref="shared:day_of_death"/> |
|
|
|
| 353 |
<xs:element ref="shared:month_of_death"/> |
|
|
|
| 354 |
<xs:element ref="shared:year_of_death"/> |
|
|
|
| 355 |
</xs:sequence> |
|
|
|
| 356 |
<xs:element ref="shared:days_to_death"/> |
|
|
|
| 357 |
</xs:choice> |
|
|
|
| 358 |
</xs:choice> |
|
|
|
| 359 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
|
|
|
| 360 |
<xs:element ref="shared:prior_diagnosis"/> |
|
|
|
| 361 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
|
|
|
| 362 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
|
|
| 363 |
<xs:element ref="cqcf:tumor_type"/> |
|
|
|
| 364 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
|
|
| 365 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
|
|
|
| 366 |
<xs:element ref="cqcf:country"/> |
|
|
|
| 367 |
</xs:sequence> |
|
|
|
| 368 |
</xs:complexType> |
|
|
|
| 369 |
</xs:element> |
|
|
|
| 370 |
</xs:schema> |
|
|
|
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
7 |
xmlns="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 8 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/shared/2.5"> |
|
8 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/shared/2.4"> |
| |
| 10 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
10 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| |
| 347 |
<xs:enumeration value="Prostate" /> |
+- |
|
|
| |
| 351 |
<xs:enumeration value="Skin" /> |
+- |
|
|
| 352 |
<xs:enumeration value="Subcutaneous tissue" /> |
|
|
|
| 353 |
<xs:enumeration value="Lymph node(s) Regional" /> |
|
|
|
| 354 |
<xs:enumeration value="Lymph node(s) Distant" /> |
|
|
|
| |
| 525 |
<xs:enumeration value="Loco-Regional" /> |
<> |
521 |
<xs:enumeration value="LOCO-REGIONAL" /> |
| 526 |
<xs:enumeration value="Metastasis" /> |
|
522 |
<xs:enumeration value="METASTASIS" /> |
| 527 |
<xs:enumeration value="Locoregional and Metastasis" /> |
|
|
|
| |
| 859 |
<xs:enumeration value="Aspirate" /> |
<> |
854 |
<xs:enumeration value="CYTOLOGY" /> |
| |
|
|
855 |
<xs:enumeration value="FINE NEEDLE ASPIRATION BIOPSY" /> |
| |
|
|
856 |
<xs:enumeration value="INCISION BIOPSY" /> |
| |
|
|
857 |
<xs:enumeration value="EXCISIONAL BIOPSY" /> |
| |
|
|
858 |
<xs:enumeration value="TUMOR RESECTION" /> |
| |
|
|
859 |
<xs:enumeration value="OTHER METHOD, SPECIFY IN NOTES" /> |
| |
| |
|
<> |
862 |
<xs:enumeration value="Endoscopic Biopsy" /> |
| 860 |
<xs:enumeration value="Biopsy (cervical / CT-guided / Other)" /> |
|
863 |
<xs:enumeration value="Transurethral resection (TURBT)" /> |
| |
| 862 |
<xs:enumeration value="Core needle biopsy" /> |
<> |
865 |
<xs:enumeration value="Lymph node sampling or dissection" /> |
| 863 |
<xs:enumeration value="Cytology (e.g. Peritoneal or pleural fluid)" /> |
|
|
|
| 864 |
<xs:enumeration value="Dilation and curettage procedure" /> |
|
866 |
<xs:enumeration value="Tumor resection" /> |
| 865 |
<xs:enumeration value="Endoscopic Biopsy" /> |
|
867 |
<xs:enumeration value="Incisional Biopsy" /> |
| |
| |
|
-+ |
869 |
<xs:enumeration value="Unknown" /> |
| |
|
|
870 |
<xs:enumeration value="Cytology (e.g. Peritoneal or pleural fluid)" /> |
| |
| 868 |
<xs:enumeration value="Incisional Biopsy" /> |
<> |
|
|
| 869 |
<xs:enumeration value="Lymph node sampling or dissection" /> |
|
872 |
<xs:enumeration value="Dilation and curettage procedure" /> |
| |
| 871 |
<xs:enumeration value="Other method, specify:" /> |
<> |
874 |
<xs:enumeration value="Aspirate" /> |
| 872 |
<xs:enumeration value="Transurethral resection (TURBT)" /> |
|
875 |
<xs:enumeration value="Core needle biopsy" /> |
| 873 |
<xs:enumeration value="Tumor resection" /> |
|
876 |
<xs:enumeration value="Biopsy (cervical / CT-guided / Other)" /> |
| 874 |
<xs:enumeration value="Unknown" /> |
|
|
|
| |
| 876 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
<> |
878 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
| |
| |
|
-+ |
1162 |
<xs:enumeration value="AT RECURRENCE/PROGRESSION OF DISEASE" /> |
| |
|
|
1163 |
<xs:enumeration value="PREOPERATIVE" /> |
| |
|
|
1164 |
<xs:enumeration value="PRE-ADJUVANT THERAPY" /> |
| |
|
|
1165 |
<xs:enumeration value="POST-ADJUVANT THERAPY" /> |
| |
|
|
1166 |
<xs:enumeration value="POST-SECONDARY THERAPY" /> |
| |
|
|
1167 |
<xs:enumeration value="OTHER" /> |
| |
| 1199 |
<xs:enumeration value="Laboratory" /> |
<> |
1208 |
<xs:enumeration value="LABORATORY" /> |
| 1200 |
<xs:enumeration value="Pathology" /> |
|
1209 |
<xs:enumeration value="PATHOLOGY" /> |
| 1201 |
<xs:enumeration value="Radiation" /> |
|
1210 |
<xs:enumeration value="RADIATION" /> |
| 1202 |
<xs:enumeration value="Physical Examination" /> |
|
1211 |
<xs:enumeration value="PHYSICAL EXAMINATION" /> |
| 1203 |
<xs:enumeration value="Imaging Study" /> |
|
1212 |
<xs:enumeration value="IMAGING STUDY" /> |
| 1204 |
<xs:enumeration value="Molecular Marker(S)" /> |
|
1213 |
<xs:enumeration value="MOLECULAR MARKER(S)" /> |
| 1205 |
<xs:enumeration value="First Seen At Further Surgery" /> |
|
1214 |
<xs:enumeration value="FIRST SEEN AT FURTHER SURGERY" /> |
| 1206 |
<xs:enumeration value="Biopsy with Histologic Confirmation" /> |
|
|
|
| 1207 |
<xs:enumeration value="Convincing Imaging" /> |
|
|
|
| 1208 |
<xs:enumeration value="Positive Biomarker (s)" /> |
|
|
|
| 1209 |
<xs:enumeration value="Other Method: Specify In Notes" /> |
|
1215 |
<xs:enumeration value="OTHER METHOD: SPECIFY IN NOTES" /> |
| |
| 1557 |
<xs:element name="ajcc_tumor_stage_code" nillable="true"> |
+- |
|
|
| 1558 |
<xs:complexType mixed="true"> |
|
|
|
| 1559 |
<xs:simpleContent> |
|
|
|
| 1560 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1561 |
<xs:enumeration value="" /> |
|
|
|
| 1562 |
<xs:enumeration value="T0" /> |
|
|
|
| 1563 |
<xs:enumeration value="Ta" /> |
|
|
|
| 1564 |
<xs:enumeration value="T1" /> |
|
|
|
| 1565 |
<xs:enumeration value="T1a" /> |
|
|
|
| 1566 |
<xs:enumeration value="T1a1" /> |
|
|
|
| 1567 |
<xs:enumeration value="T1a2" /> |
|
|
|
| 1568 |
<xs:enumeration value="T1b" /> |
|
|
|
| 1569 |
<xs:enumeration value="T1b1" /> |
|
|
|
| 1570 |
<xs:enumeration value="T1b2" /> |
|
|
|
| 1571 |
<xs:enumeration value="T1c" /> |
|
|
|
| 1572 |
<xs:enumeration value="T1mi" /> |
|
|
|
| 1573 |
<xs:enumeration value="T2" /> |
|
|
|
| 1574 |
<xs:enumeration value="T2a" /> |
|
|
|
| 1575 |
<xs:enumeration value="T2a1" /> |
|
|
|
| 1576 |
<xs:enumeration value="T2a2" /> |
|
|
|
| 1577 |
<xs:enumeration value="T2b" /> |
|
|
|
| 1578 |
<xs:enumeration value="T2c" /> |
|
|
|
| 1579 |
<xs:enumeration value="T3" /> |
|
|
|
| 1580 |
<xs:enumeration value="T3a" /> |
|
|
|
| 1581 |
<xs:enumeration value="T3b" /> |
|
|
|
| 1582 |
<xs:enumeration value="T3c" /> |
|
|
|
| 1583 |
<xs:enumeration value="T4" /> |
|
|
|
| 1584 |
<xs:enumeration value="T4a" /> |
|
|
|
| 1585 |
<xs:enumeration value="T4b" /> |
|
|
|
| 1586 |
<xs:enumeration value="T4c" /> |
|
|
|
| 1587 |
<xs:enumeration value="T4d" /> |
|
|
|
| 1588 |
<xs:enumeration value="Tis" /> |
|
|
|
| 1589 |
<xs:enumeration value="Tis (DCIS)" /> |
|
|
|
| 1590 |
<xs:enumeration value="Tis (LCIS)" /> |
|
|
|
| 1591 |
<xs:enumeration value="Tis (Paget's)" /> |
|
|
|
| 1592 |
<xs:enumeration value="TX" /> |
|
|
|
| 1593 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
|
|
|
| 1594 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1595 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 1596 |
</xs:restriction> |
|
|
|
| 1597 |
</xs:simpleContent> |
|
|
|
| 1598 |
</xs:complexType> |
|
|
|
| 1599 |
</xs:element> |
|
|
|
| |
| 1601 |
<xs:element name="ajcc_neoplasm_disease_lymph_node_stage" nillable="true"> |
+- |
|
|
| 1602 |
<xs:complexType mixed="true"> |
|
|
|
| 1603 |
<xs:simpleContent> |
|
|
|
| 1604 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1605 |
<xs:enumeration value="" /> |
|
|
|
| 1606 |
<xs:enumeration value="NX" /> |
|
|
|
| 1607 |
<xs:enumeration value="N0" /> |
|
|
|
| 1608 |
<xs:enumeration value="N0 (i-)" /> |
|
|
|
| 1609 |
<xs:enumeration value="N0 (i+)" /> |
|
|
|
| 1610 |
<xs:enumeration value="N0 (mol-)" /> |
|
|
|
| 1611 |
<xs:enumeration value="N0 (mol+)" /> |
|
|
|
| 1612 |
<xs:enumeration value="N1" /> |
|
|
|
| 1613 |
<xs:enumeration value="N1mi" /> |
|
|
|
| 1614 |
<xs:enumeration value="N1a" /> |
|
|
|
| 1615 |
<xs:enumeration value="N1b" /> |
|
|
|
| 1616 |
<xs:enumeration value="N1bI" /> |
|
|
|
| 1617 |
<xs:enumeration value="N1bII" /> |
|
|
|
| 1618 |
<xs:enumeration value="N1bIII" /> |
|
|
|
| 1619 |
<xs:enumeration value="N1bIV" /> |
|
|
|
| 1620 |
<xs:enumeration value="N1c" /> |
|
|
|
| 1621 |
<xs:enumeration value="N2" /> |
|
|
|
| 1622 |
<xs:enumeration value="N2a" /> |
|
|
|
| 1623 |
<xs:enumeration value="N2b" /> |
|
|
|
| 1624 |
<xs:enumeration value="N2c" /> <!-- TODO: Make sure that this PV is being procured before sending to DCC. ALSO DELETE THIS COMMENT --> |
|
|
|
| 1625 |
<xs:enumeration value="N3" /> |
|
|
|
| 1626 |
<xs:enumeration value="N3a" /> |
|
|
|
| 1627 |
<xs:enumeration value="N3b" /> |
|
|
|
| 1628 |
<xs:enumeration value="N3c" /> |
|
|
|
| 1629 |
<xs:enumeration value="N4" /> |
|
|
|
| 1630 |
<xs:attribute name="cde" type="xs:string" default="3203106" /> |
|
|
|
| 1631 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1632 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 1633 |
</xs:restriction> |
|
|
|
| 1634 |
</xs:simpleContent> |
|
|
|
| 1635 |
</xs:complexType> |
|
|
|
| 1636 |
</xs:element> |
|
|
|
| |
| 1638 |
<xs:element name="ajcc_cancer_metastasis_stage_code" nillable="true"> |
+- |
|
|
| 1639 |
<xs:complexType mixed="true"> |
|
|
|
| 1640 |
<xs:simpleContent> |
|
|
|
| 1641 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1642 |
<xs:enumeration value="" /> |
|
|
|
| 1643 |
<xs:enumeration value="cM0 (i+)" /> |
|
|
|
| 1644 |
<xs:enumeration value="M0" /> |
|
|
|
| 1645 |
<xs:enumeration value="M1" /> |
|
|
|
| 1646 |
<xs:enumeration value="M1a" /> |
|
|
|
| 1647 |
<xs:enumeration value="M1b" /> |
|
|
|
| 1648 |
<xs:enumeration value="M1c" /> |
|
|
|
| 1649 |
<xs:enumeration value="M2" /> <!-- TODO: Make sure that this PV is being procured before sending to DCC. ALSO DELETE THIS COMMENT --> |
|
|
|
| 1650 |
<xs:enumeration value="MX" /> |
|
|
|
| 1651 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
|
|
|
| 1652 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1653 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 1654 |
</xs:restriction> |
|
|
|
| 1655 |
</xs:simpleContent> |
|
|
|
| 1656 |
</xs:complexType> |
|
|
|
| 1657 |
</xs:element> |
|
|
|
| |
| 1659 |
<xs:element name="ajcc_neoplasm_disease_stage" nillable="true"> |
+- |
|
|
| 1660 |
<xs:complexType mixed="true"> |
|
|
|
| 1661 |
<xs:simpleContent> |
|
|
|
| 1662 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1663 |
<xs:enumeration value="" /> |
|
|
|
| 1664 |
<xs:enumeration value="Stage X" /> |
|
|
|
| 1665 |
<xs:enumeration value="Stage Tis" /> |
|
|
|
| 1666 |
<xs:enumeration value="Stage 0" /> |
|
|
|
| 1667 |
<xs:enumeration value="Stage I" /> |
|
|
|
| 1668 |
<xs:enumeration value="Stage IA" /> |
|
|
|
| 1669 |
<xs:enumeration value="Stage IB" /> |
|
|
|
| 1670 |
<xs:enumeration value="Stage II" /> |
|
|
|
| 1671 |
<xs:enumeration value="Stage IIA" /> |
|
|
|
| 1672 |
<xs:enumeration value="Stage IIB" /> |
|
|
|
| 1673 |
<xs:enumeration value="Stage IIC" /> |
|
|
|
| 1674 |
<xs:enumeration value="Stage III" /> |
|
|
|
| 1675 |
<xs:enumeration value="Stage IIIA" /> |
|
|
|
| 1676 |
<xs:enumeration value="Stage IIIB" /> |
|
|
|
| 1677 |
<xs:enumeration value="Stage IIIC" /> |
|
|
|
| 1678 |
<xs:enumeration value="Stage IV" /> |
|
|
|
| 1679 |
<xs:enumeration value="Stage IVA" /> |
|
|
|
| 1680 |
<xs:enumeration value="Stage IVB" /> |
|
|
|
| 1681 |
<xs:enumeration value="Stage IIA Cervix" /> |
|
|
|
| 1682 |
<xs:enumeration value="Stage II Cervix" /> |
|
|
|
| 1683 |
<xs:enumeration value="Stage IB2" /> |
|
|
|
| 1684 |
<xs:enumeration value="Stage IB1" /> |
|
|
|
| 1685 |
<xs:enumeration value="Stage IB Cervix" /> |
|
|
|
| 1686 |
<xs:enumeration value="Stage IA2" /> |
|
|
|
| 1687 |
<xs:enumeration value="Stage IA1" /> |
|
|
|
| 1688 |
<xs:enumeration value="Stage IVC" /> |
|
|
|
| 1689 |
<xs:enumeration value="Stage 0is" /> |
|
|
|
| 1690 |
<xs:enumeration value="Stage 0a" /> |
|
|
|
| 1691 |
<xs:attribute name="cde" type="xs:string" default="3203222" /> |
|
|
|
| 1692 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1693 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1694 |
</xs:restriction> |
|
|
|
| 1695 |
</xs:simpleContent> |
|
|
|
| 1696 |
</xs:complexType> |
|
|
|
| 1697 |
</xs:element> |
|
|
|
| |
| 1699 |
<xs:element name="gynecologic_figo_staging_system" nillable="true"> |
+- |
|
|
| 1700 |
<xs:complexType mixed="true"> |
|
|
|
| 1701 |
<xs:simpleContent> |
|
|
|
| 1702 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1703 |
<xs:enumeration value="" /> |
|
|
|
| 1704 |
<xs:enumeration value="1988" /> |
|
|
|
| 1705 |
<xs:enumeration value="1995" /> |
|
|
|
| 1706 |
<xs:enumeration value="2009" /> |
|
|
|
| 1707 |
<xs:attribute name="cde" type="xs:string" default="3114049" /> |
|
|
|
| 1708 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 1709 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 1710 |
</xs:restriction> |
|
|
|
| 1711 |
</xs:simpleContent> |
|
|
|
| 1712 |
</xs:complexType> |
|
|
|
| 1713 |
</xs:element> |
|
|
|
| |
| 1715 |
<xs:element name="karnofsky_performance_score"> |
+- |
|
|
| 1716 |
<xs:complexType> |
|
|
|
| 1717 |
<xs:simpleContent> |
|
|
|
| 1718 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1719 |
<xs:enumeration value="" /> |
|
|
|
| 1720 |
<xs:enumeration value="0" /> |
|
|
|
| 1721 |
<xs:enumeration value="10" /> |
|
|
|
| 1722 |
<xs:enumeration value="20" /> |
|
|
|
| 1723 |
<xs:enumeration value="30" /> |
|
|
|
| 1724 |
<xs:enumeration value="40" /> |
|
|
|
| 1725 |
<xs:enumeration value="50" /> |
|
|
|
| 1726 |
<xs:enumeration value="60" /> |
|
|
|
| 1727 |
<xs:enumeration value="70" /> |
|
|
|
| 1728 |
<xs:enumeration value="80" /> |
|
|
|
| 1729 |
<xs:enumeration value="90" /> |
|
|
|
| 1730 |
<xs:enumeration value="100" /> |
|
|
|
| 1731 |
<xs:attribute name="cde" type="xs:string" default="2003853" /> |
|
|
|
| 1732 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
|
|
|
| 1733 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1734 |
</xs:restriction> |
|
|
|
| 1735 |
</xs:simpleContent> |
|
|
|
| 1736 |
</xs:complexType> |
|
|
|
| 1737 |
</xs:element> |
|
|
|
| |
| 1739 |
<xs:element name="eastern_cancer_oncology_group"> |
+- |
|
|
| 1740 |
<xs:complexType> |
|
|
|
| 1741 |
<xs:simpleContent> |
|
|
|
| 1742 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1743 |
<xs:enumeration value="" /> |
|
|
|
| 1744 |
<xs:enumeration value="0" /> |
|
|
|
| 1745 |
<xs:enumeration value="1" /> |
|
|
|
| 1746 |
<xs:enumeration value="2" /> |
|
|
|
| 1747 |
<xs:enumeration value="3" /> |
|
|
|
| 1748 |
<xs:enumeration value="4" /> |
|
|
|
| 1749 |
<xs:enumeration value="5" /> |
|
|
|
| 1750 |
<xs:attribute name="cde" type="xs:string" default="88" /> |
|
|
|
| 1751 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9" /> |
|
|
|
| 1752 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1753 |
</xs:restriction> |
|
|
|
| 1754 |
</xs:simpleContent> |
|
|
|
| 1755 |
</xs:complexType> |
|
|
|
| 1756 |
</xs:element> |
|
|
|
| |
| 1758 |
<xs:element name="followup_case_report_form_submission_reason" nillable="true"> |
+- |
|
|
| 1759 |
<xs:complexType mixed="true"> |
|
|
|
| 1760 |
<xs:simpleContent> |
|
|
|
| 1761 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1762 |
<xs:enumeration value="" /> |
|
|
|
| 1763 |
<xs:enumeration value="Additional New Tumor Event" /> |
|
|
|
| 1764 |
<xs:enumeration value="Scheduled Follow-up Submission" /> |
|
|
|
| 1765 |
<xs:attribute name="cde" type="xs:string" default="3233305" /> |
|
|
|
| 1766 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1767 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1768 |
</xs:restriction> |
|
|
|
| 1769 |
</xs:simpleContent> |
|
|
|
| 1770 |
</xs:complexType> |
|
|
|
| 1771 |
</xs:element> |
|
|
|
| |
| 1779 |
<xs:element name="primary_lymph_node_presentation_assessment" nillable="true"> |
+- |
|
|
| 1780 |
<xs:complexType> |
|
|
|
| 1781 |
<xs:simpleContent> |
|
|
|
| 1782 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1783 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 1784 |
<xs:attribute name="cde" type="xs:string" default="2200396" /> |
|
|
|
| 1785 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1786 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1787 |
</xs:extension> |
|
|
|
| 1788 |
</xs:simpleContent> |
|
|
|
| 1789 |
</xs:complexType> |
|
|
|
| 1790 |
</xs:element> |
|
|
|
| |
| 1792 |
<xs:element name="stopped_smoking_year" nillable="true"> |
+- |
|
|
| 1793 |
<xs:complexType mixed="true"> |
|
|
|
| 1794 |
<xs:simpleContent> |
|
|
|
| 1795 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 1796 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 1797 |
<xs:attribute name="cde" type="xs:string" default="2228610" /> |
|
|
|
| 1798 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1799 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 1800 |
</xs:extension> |
|
|
|
| 1801 |
</xs:simpleContent> |
|
|
|
| 1802 |
</xs:complexType> |
|
|
|
| 1803 |
</xs:element> |
|
|
|
| |
| 1806 |
<xs:element name="residual_tumor" nillable="true"> |
+- |
|
|
| 1807 |
<xs:complexType> |
|
|
|
| 1808 |
<xs:simpleContent> |
|
|
|
| 1809 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1810 |
<xs:enumeration value="" /> |
|
|
|
| 1811 |
<xs:enumeration value="R0" /> |
|
|
|
| 1812 |
<xs:enumeration value="R1" /> |
|
|
|
| 1813 |
<xs:enumeration value="R2" /> |
|
|
|
| 1814 |
<xs:enumeration value="RX" /> |
|
|
|
| 1815 |
<xs:attribute name="cde" type="xs:string" default="2608702" /> |
|
|
|
| 1816 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1817 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 1818 |
</xs:restriction> |
|
|
|
| 1819 |
</xs:simpleContent> |
|
|
|
| 1820 |
</xs:complexType> |
|
|
|
| 1821 |
</xs:element> |
|
|
|
| |
| 1823 |
<xs:element name="neoplasm_histologic_grade" nillable="true"> |
+- |
|
|
| 1824 |
<xs:complexType mixed="true"> |
|
|
|
| 1825 |
<xs:simpleContent> |
|
|
|
| 1826 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1827 |
<xs:enumeration value="" /> |
|
|
|
| 1828 |
<xs:enumeration value="G1" /> |
|
|
|
| 1829 |
<xs:enumeration value="G2" /> |
|
|
|
| 1830 |
<xs:enumeration value="G3" /> |
|
|
|
| 1831 |
<xs:enumeration value="G4" /> |
|
|
|
| 1832 |
<xs:enumeration value="GB" /> |
|
|
|
| 1833 |
<xs:enumeration value="GX" /> |
|
|
|
| 1834 |
<xs:attribute name="cde" type="xs:string" default="2785839" /> |
|
|
|
| 1835 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1836 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 1837 |
</xs:restriction> |
|
|
|
| 1838 |
</xs:simpleContent> |
|
|
|
| 1839 |
</xs:complexType> |
|
|
|
| 1840 |
</xs:element> |
|
|
|
| |
| 1842 |
<xs:element name="tumor_histologic_subtype" nillable="true"> |
+- |
|
|
| 1843 |
<xs:complexType mixed="true"> |
|
|
|
| 1844 |
<xs:simpleContent> |
|
|
|
| 1845 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1846 |
<xs:enumeration value="" /> |
|
|
|
| 1847 |
<xs:enumeration value="Adenocarcinoma" /> |
|
|
|
| 1848 |
<xs:enumeration value="Cystadenocarcinoma" /> |
|
|
|
| 1849 |
<xs:enumeration value="Glioblastoma multiforme" /> |
|
|
|
| 1850 |
<xs:enumeration value="Infiltrating Carcinoma NOS" /> |
|
|
|
| 1851 |
<xs:enumeration value="Infiltrating Lobular" /> |
|
|
|
| 1852 |
<xs:enumeration value="Mixed Histology" /> |
|
|
|
| 1853 |
<xs:enumeration value="Muscle invasive urothelial carcinoma" /> |
|
|
|
| 1854 |
<xs:enumeration value="Papillary renal cell carcinoma" /> |
|
|
|
| 1855 |
<xs:enumeration value="Squamous cell carcinoma" /> |
|
|
|
| 1856 |
<xs:attribute name="cde" type="xs:string" default="2831122" /> |
|
|
|
| 1857 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1858 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 1859 |
</xs:restriction> |
|
|
|
| 1860 |
</xs:simpleContent> |
|
|
|
| 1861 |
</xs:complexType> |
|
|
|
| 1862 |
</xs:element> |
|
|
|
| |
| 1864 |
<xs:element name="number_pack_years_smoked" nillable="true"> |
+- |
|
|
| 1865 |
<xs:complexType> |
|
|
|
| 1866 |
<xs:simpleContent> |
|
|
|
| 1867 |
<xs:extension base="utility:number_or_null"> |
|
|
|
| 1868 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 1869 |
<xs:attribute name="cde" type="xs:string" default="2955385" /> |
|
|
|
| 1870 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1871 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1872 |
</xs:extension> |
|
|
|
| 1873 |
</xs:simpleContent> |
|
|
|
| 1874 |
</xs:complexType> |
|
|
|
| 1875 |
</xs:element> |
|
|
|
| |
| 1877 |
<xs:element name="lymph_node_examined_count" nillable="true"> |
+- |
|
|
| 1878 |
<xs:complexType> |
|
|
|
| 1879 |
<xs:simpleContent> |
|
|
|
| 1880 |
<xs:extension base="utility:integer_or_null"> |
|
|
|
| 1881 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 1882 |
<xs:attribute name="cde" type="xs:string" default="3" /> |
|
|
|
| 1883 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1884 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1885 |
</xs:extension> |
|
|
|
| 1886 |
</xs:simpleContent> |
|
|
|
| 1887 |
</xs:complexType> |
|
|
|
| 1888 |
</xs:element> |
|
|
|
| |
| 1890 |
<xs:element name="number_of_lymphnodes_positive_by_ihc" nillable="true"> |
+- |
|
|
| 1891 |
<xs:complexType> |
|
|
|
| 1892 |
<xs:simpleContent> |
|
|
|
| 1893 |
<xs:extension base="utility:integer_or_null"> |
|
|
|
| 1894 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 1895 |
<xs:attribute name="cde" type="xs:string" default="3086383" /> |
|
|
|
| 1896 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1897 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 1898 |
</xs:extension> |
|
|
|
| 1899 |
</xs:simpleContent> |
|
|
|
| 1900 |
</xs:complexType> |
|
|
|
| 1901 |
</xs:element> |
|
|
|
| |
| 1903 |
<xs:element name="number_of_lymphnodes_positive_by_he" nillable="true"> |
+- |
|
|
| 1904 |
<xs:complexType> |
|
|
|
| 1905 |
<xs:simpleContent> |
|
|
|
| 1906 |
<xs:extension base="utility:integer_or_null"> |
|
|
|
| 1907 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 1908 |
<xs:attribute name="cde" type="xs:string" default="3086388" /> |
|
|
|
| 1909 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1910 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1911 |
</xs:extension> |
|
|
|
| 1912 |
</xs:simpleContent> |
|
|
|
| 1913 |
</xs:complexType> |
|
|
|
| 1914 |
</xs:element> |
|
|
|
| |
| 1916 |
<xs:element name="margin_status" nillable="true"> |
+- |
|
|
| 1917 |
<xs:complexType> |
|
|
|
| 1918 |
<xs:simpleContent> |
|
|
|
| 1919 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1920 |
<xs:enumeration value="" /> |
|
|
|
| 1921 |
<xs:enumeration value="Close" /> |
|
|
|
| 1922 |
<xs:enumeration value="Negative" /> |
|
|
|
| 1923 |
<xs:enumeration value="Positive" /> |
|
|
|
| 1924 |
<xs:attribute name="cde" type="xs:string" default="3114007" /> |
|
|
|
| 1925 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1926 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 1927 |
</xs:restriction> |
|
|
|
| 1928 |
</xs:simpleContent> |
|
|
|
| 1929 |
</xs:complexType> |
|
|
|
| 1930 |
</xs:element> |
|
|
|
| |
| 1932 |
<xs:element name="month_of_performance_status_follow_up_score" nillable="true"> |
+- |
|
|
| 1933 |
<xs:complexType> |
|
|
|
| 1934 |
<xs:simpleContent> |
|
|
|
| 1935 |
<xs:extension base="utility:generic_month"> |
|
|
|
| 1936 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 1937 |
<xs:attribute name="cde" type="xs:string" default="3121370" /> |
|
|
|
| 1938 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1939 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1940 |
</xs:extension> |
|
|
|
| 1941 |
</xs:simpleContent> |
|
|
|
| 1942 |
</xs:complexType> |
|
|
|
| 1943 |
</xs:element> |
|
|
|
| |
| 1945 |
<xs:element name="day_of_performance_status_follow_up_score" nillable="true"> |
+- |
|
|
| 1946 |
<xs:complexType> |
|
|
|
| 1947 |
<xs:simpleContent> |
|
|
|
| 1948 |
<xs:extension base="utility:generic_day"> |
|
|
|
| 1949 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 1950 |
<xs:attribute name="cde" type="xs:string" default="3121372" /> |
|
|
|
| 1951 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1952 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1953 |
</xs:extension> |
|
|
|
| 1954 |
</xs:simpleContent> |
|
|
|
| 1955 |
</xs:complexType> |
|
|
|
| 1956 |
</xs:element> |
|
|
|
| |
| 1958 |
<xs:element name="year_of_performance_status_follow_up_score" nillable="true"> |
+- |
|
|
| 1959 |
<xs:complexType> |
|
|
|
| 1960 |
<xs:simpleContent> |
|
|
|
| 1961 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 1962 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 1963 |
<xs:attribute name="cde" type="xs:string" default="3121374" /> |
|
|
|
| 1964 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1965 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1966 |
</xs:extension> |
|
|
|
| 1967 |
</xs:simpleContent> |
|
|
|
| 1968 |
</xs:complexType> |
|
|
|
| 1969 |
</xs:element> |
|
|
|
| |
| 1971 |
<xs:element name="new_tumor_event_after_initial_treatment" nillable="true"> |
+- |
|
|
| 1972 |
<xs:complexType> |
|
|
|
| 1973 |
<xs:simpleContent> |
|
|
|
| 1974 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 1975 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 1976 |
<xs:attribute name="cde" type="xs:string" default="3121376" /> |
|
|
|
| 1977 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 1978 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1979 |
</xs:extension> |
|
|
|
| 1980 |
</xs:simpleContent> |
|
|
|
| 1981 |
</xs:complexType> |
|
|
|
| 1982 |
</xs:element> |
|
|
|
| |
| 1984 |
<xs:element name="residual_disease_post_new_tumor_event_margin_status" nillable="true"> |
+- |
|
|
| 1985 |
<xs:complexType mixed="true"> |
|
|
|
| 1986 |
<xs:simpleContent> |
|
|
|
| 1987 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 1988 |
<xs:enumeration value="" /> |
|
|
|
| 1989 |
<xs:enumeration value="R0" /> |
|
|
|
| 1990 |
<xs:enumeration value="R1" /> |
|
|
|
| 1991 |
<xs:enumeration value="R2" /> |
|
|
|
| 1992 |
<xs:enumeration value="RX" /> |
|
|
|
| 1993 |
<xs:attribute name="cde" type="xs:string" default="3104061" /> |
|
|
|
| 1994 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 1995 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 1996 |
</xs:restriction> |
|
|
|
| 1997 |
</xs:simpleContent> |
|
|
|
| 1998 |
</xs:complexType> |
|
|
|
| 1999 |
</xs:element> |
|
|
|
| |
| 2001 |
<xs:element name="tumor_other_histologic_subtype_descriptive_text" nillable="true"> |
+- |
|
|
| 2002 |
<xs:complexType> |
|
|
|
| 2003 |
<xs:simpleContent> |
|
|
|
| 2004 |
<xs:extension base="xs:string"> |
|
|
|
| 2005 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 2006 |
<xs:attribute name="cde" type="xs:string" default="3124492" /> |
|
|
|
| 2007 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
|
|
|
| 2008 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 2009 |
</xs:extension> |
|
|
|
| 2010 |
</xs:simpleContent> |
|
|
|
| 2011 |
</xs:complexType> |
|
|
|
| 2012 |
</xs:element> |
|
|
|
| |
| 2014 |
<xs:element name="lymphovascular_invasion_present" nillable="true"> |
+- |
|
|
| 2015 |
<xs:complexType mixed="true"> |
|
|
|
| 2016 |
<xs:simpleContent> |
|
|
|
| 2017 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 2018 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 2019 |
<xs:attribute name="cde" type="xs:string" default="64727" /> |
|
|
|
| 2020 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
|
|
|
| 2021 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 2022 |
</xs:extension> |
|
|
|
| 2023 |
</xs:simpleContent> |
|
|
|
| 2024 |
</xs:complexType> |
|
|
|
| 2025 |
</xs:element> |
|
|
|
| |
| 2027 |
<xs:element name="followup_treatment_success" nillable="true"> |
+- |
|
|
| 2028 |
<xs:complexType> |
|
|
|
| 2029 |
<xs:simpleContent> |
|
|
|
| 2030 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 2031 |
<xs:enumeration value="" /> |
|
|
|
| 2032 |
<xs:enumeration value="Complete Remission/Response" /> |
|
|
|
| 2033 |
<xs:enumeration value="Not Applicable" /> |
|
|
|
| 2034 |
<xs:enumeration value="Partial Remission/Response" /> |
|
|
|
| 2035 |
<xs:enumeration value="Persistent Disease" /> |
|
|
|
| 2036 |
<xs:enumeration value="Progressive Disease" /> |
|
|
|
| 2037 |
<xs:enumeration value="Stable Disease" /> |
|
|
|
| 2038 |
<xs:enumeration value="Unknown" /> |
|
|
|
| 2039 |
<xs:attribute name="cde" type="xs:string" default="3104050" /> |
|
|
|
| 2040 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 2041 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 2042 |
</xs:restriction> |
|
|
|
| 2043 |
</xs:simpleContent> |
|
|
|
| 2044 |
</xs:complexType> |
|
|
|
| 2045 |
</xs:element> |
|
|
|
| |
| 2047 |
<xs:element name="lactate_dehydrogenase_result" nillable="true"> |
+- |
|
|
| 2048 |
<xs:complexType mixed="true"> |
|
|
|
| 2049 |
<xs:simpleContent> |
|
|
|
| 2050 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 2051 |
<xs:enumeration value="" /> |
|
|
|
| 2052 |
<xs:enumeration value="Elevated" /> |
|
|
|
| 2053 |
<xs:enumeration value="Low" /> |
|
|
|
| 2054 |
<xs:enumeration value="Normal" /> |
|
|
|
| 2055 |
<xs:attribute name="cde" type="xs:string" default="3113468" /> |
|
|
|
| 2056 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
|
|
|
| 2057 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 2058 |
</xs:restriction> |
|
|
|
| 2059 |
</xs:simpleContent> |
|
|
|
| 2060 |
</xs:complexType> |
|
|
|
| 2061 |
</xs:element> |
|
|
|
| |
| 2064 |
<xs:element name="anatomic_organ_subdivision" nillable="true"> |
+- |
|
|
| 2065 |
<xs:complexType> |
|
|
|
| 2066 |
<xs:simpleContent> |
|
|
|
| 2067 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 2068 |
<xs:enumeration value="" /> |
|
|
|
| 2069 |
<xs:enumeration value="Above" /> |
|
|
|
| 2070 |
<xs:enumeration value="Apex" /> |
|
|
|
| 2071 |
<xs:enumeration value="Anterior" /> |
|
|
|
| 2072 |
<xs:enumeration value="Base" /> |
|
|
|
| 2073 |
<xs:enumeration value="Below" /> |
|
|
|
| 2074 |
<xs:enumeration value="Bilateral" /> |
|
|
|
| 2075 |
<xs:enumeration value="Bladder, NOS" /> |
|
|
|
| 2076 |
<xs:enumeration value="Body" /> |
|
|
|
| 2077 |
<xs:enumeration value="Both" /> |
|
|
|
| 2078 |
<xs:enumeration value="Bronchial" /> |
|
|
|
| 2079 |
<xs:enumeration value="Central" /> |
|
|
|
| 2080 |
<xs:enumeration value="Cerebellar" /> |
|
|
|
| 2081 |
<xs:enumeration value="Cervical" /> |
|
|
|
| 2082 |
<xs:enumeration value="Distal" /> |
|
|
|
| 2083 |
<xs:enumeration value="Dome" /> |
|
|
|
| 2084 |
<xs:enumeration value="Ectopic" /> |
|
|
|
| 2085 |
<xs:enumeration value="Frontal" /> |
|
|
|
| 2086 |
<xs:enumeration value="Fronto-parietal" /> |
|
|
|
| 2087 |
<xs:enumeration value="Head" /> |
|
|
|
| 2088 |
<xs:enumeration value="L-Lower" /> |
|
|
|
| 2089 |
<xs:enumeration value="L-Upper" /> |
|
|
|
| 2090 |
<xs:enumeration value="Lateral" /> |
|
|
|
| 2091 |
<xs:enumeration value="Left" /> |
|
|
|
| 2092 |
<xs:enumeration value="Left Lower Outer Quadrant" /> |
|
|
|
| 2093 |
<xs:enumeration value="Left Lower Inner Quadrant" /> |
|
|
|
| 2094 |
<xs:enumeration value="Left Upper Outer Quadrant" /> |
|
|
|
| 2095 |
<xs:enumeration value="Left Upper Inner Quadrant" /> |
|
|
|
| 2096 |
<xs:enumeration value="Lower" /> |
|
|
|
| 2097 |
<xs:enumeration value="Lower Outer Quadrant" /> |
|
|
|
| 2098 |
<xs:enumeration value="Lower Inner Quadrant" /> |
|
|
|
| 2099 |
<xs:enumeration value="Lumbar" /> |
|
|
|
| 2100 |
<xs:enumeration value="Medial" /> |
|
|
|
| 2101 |
<xs:enumeration value="Mediastinal" /> |
|
|
|
| 2102 |
<xs:enumeration value="Mid" /> |
|
|
|
| 2103 |
<xs:enumeration value="Midline" /> |
|
|
|
| 2104 |
<xs:enumeration value="N/A" /> |
|
|
|
| 2105 |
<xs:enumeration value="Neck" /> |
|
|
|
| 2106 |
<xs:enumeration value="Not a Paired Site" /> |
|
|
|
| 2107 |
<xs:enumeration value="Occipital" /> |
|
|
|
| 2108 |
<xs:enumeration value="Parietal" /> |
|
|
|
| 2109 |
<xs:enumeration value="Posterior" /> |
|
|
|
| 2110 |
<xs:enumeration value="Proximal" /> |
|
|
|
| 2111 |
<xs:enumeration value="R-Lower" /> |
|
|
|
| 2112 |
<xs:enumeration value="R-Middle" /> |
|
|
|
| 2113 |
<xs:enumeration value="R-Upper" /> |
|
|
|
| 2114 |
<xs:enumeration value="Right" /> |
|
|
|
| 2115 |
<xs:enumeration value="Right Lower Outer Quadrant" /> |
|
|
|
| 2116 |
<xs:enumeration value="Right Lower Inner Quadrant" /> |
|
|
|
| 2117 |
<xs:enumeration value="Right Upper Outer Quadrant" /> |
|
|
|
| 2118 |
<xs:enumeration value="Right Upper Inner Quadrant" /> |
|
|
|
| 2119 |
<xs:enumeration value="Supratentorial" /> |
|
|
|
| 2120 |
<xs:enumeration value="Tail" /> |
|
|
|
| 2121 |
<xs:enumeration value="Temporal" /> |
|
|
|
| 2122 |
<xs:enumeration value="Thoracic" /> |
|
|
|
| 2123 |
<xs:enumeration value="Trigone" /> |
|
|
|
| 2124 |
<xs:enumeration value="Upper" /> |
|
|
|
| 2125 |
<xs:enumeration value="Upper Inner Quadrant" /> |
|
|
|
| 2126 |
<xs:enumeration value="Upper Outer Quadrant" /> |
|
|
|
| 2127 |
<xs:enumeration value="Urinary, NOS" /> |
|
|
|
| 2128 |
<xs:enumeration value="Wall, Anterior" /> |
|
|
|
| 2129 |
<xs:enumeration value="Wall, Lateral" /> |
|
|
|
| 2130 |
<xs:enumeration value="Wall, NOS" /> |
|
|
|
| 2131 |
<xs:enumeration value="Wall, Posterior" /> |
|
|
|
| 2132 |
<xs:attribute name="cde" type="xs:string" default="2008006" /> |
|
|
|
| 2133 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 2134 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
|
|
|
| 2135 |
</xs:restriction> |
|
|
|
| 2136 |
</xs:simpleContent> |
|
|
|
| 2137 |
</xs:complexType> |
|
|
|
| 2138 |
</xs:element> |
|
|
|
| |
| 2140 |
<xs:element name="new_neoplasm_event_type" nillable="true"> |
+- |
|
|
| 2141 |
<xs:complexType mixed="true"> |
|
|
|
| 2142 |
<xs:simpleContent> |
|
|
|
| 2143 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 2144 |
<xs:enumeration value="" /> |
|
|
|
| 2145 |
<xs:enumeration value="Biochemical evidence of disease" /> |
|
|
|
| 2146 |
<xs:enumeration value="Both Locoregional and Distant Metastasis" /> |
|
|
|
| 2147 |
<xs:enumeration value="Distant Metastasis" /> |
|
|
|
| 2148 |
<xs:enumeration value="Extrahepatic Recurrence" /> |
|
|
|
| 2149 |
<xs:enumeration value="Intrahepatic Recurrence" /> |
|
|
|
| 2150 |
<xs:enumeration value="Locoregional (Urothelial tumor event)" /> |
|
|
|
| 2151 |
<xs:enumeration value="Locoregional Disease" /> |
|
|
|
| 2152 |
<xs:enumeration value="Locoregional Recurrence" /> |
|
|
|
| 2153 |
<xs:enumeration value="Metastatic" /> |
|
|
|
| 2154 |
<xs:enumeration value="New Primary Tumor" /> |
|
|
|
| 2155 |
<xs:enumeration value="No New Tumor Event" /> |
|
|
|
| 2156 |
<xs:enumeration value="Not Applicable" /> |
|
|
|
| 2157 |
<xs:enumeration value="Recurrence" /> |
|
|
|
| 2158 |
<xs:attribute name="cde" type="xs:string" default="3119721" /> |
|
|
|
| 2159 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 2160 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 2161 |
</xs:restriction> |
|
|
|
| 2162 |
</xs:simpleContent> |
|
|
|
| 2163 |
</xs:complexType> |
|
|
|
| 2164 |
</xs:element> |
|
|
|
| |
| 2166 |
<xs:element name="followup_met_assessment_outcome_success_margin_status" nillable="true"> |
+- |
|
|
| 2167 |
<xs:complexType mixed="true"> |
|
|
|
| 2168 |
<xs:simpleContent> |
|
|
|
| 2169 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 2170 |
<xs:enumeration value="" /> |
|
|
|
| 2171 |
<xs:enumeration value="R0" /> |
|
|
|
| 2172 |
<xs:enumeration value="R1" /> |
|
|
|
| 2173 |
<xs:enumeration value="R2" /> |
|
|
|
| 2174 |
<xs:enumeration value="RX" /> |
|
|
|
| 2175 |
<xs:attribute name="cde" type="xs:string" default="3104081" /> |
|
|
|
| 2176 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 2177 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 2178 |
</xs:restriction> |
|
|
|
| 2179 |
</xs:simpleContent> |
|
|
|
| 2180 |
</xs:complexType> |
|
|
|
| 2181 |
</xs:element> |
|
|
|
| |
| 2183 |
<xs:element name="venous_invasion"> |
+- |
|
|
| 2184 |
<xs:complexType> |
|
|
|
| 2185 |
<xs:simpleContent> |
|
|
|
| 2186 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 2187 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 2188 |
<xs:attribute name="cde" type="xs:string" default="64358" /> |
|
|
|
| 2189 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
|
|
|
| 2190 |
</xs:extension> |
|
|
|
| 2191 |
</xs:simpleContent> |
|
|
|
| 2192 |
</xs:complexType> |
|
|
|
| 2193 |
</xs:element> |
|
|
|
| |
| 2195 |
<xs:element name="lymphatic_invasion"> |
+- |
|
|
| 2196 |
<xs:complexType> |
|
|
|
| 2197 |
<xs:simpleContent> |
|
|
|
| 2198 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 2199 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 2200 |
<xs:attribute name="cde" type="xs:string" default="64171" /> |
|
|
|
| 2201 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.8" /> |
|
|
|
| 2202 |
</xs:extension> |
|
|
|
| 2203 |
</xs:simpleContent> |
|
|
|
| 2204 |
</xs:complexType> |
|
|
|
| 2205 |
</xs:element> |
|
|
|
| 1 |
<?xml version="1.0" encoding="utf-8"?> |
+- |
|
|
| |
| 3 |
<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" xmlns="http://tcga.nci/bcr/xml/clinical/shared/lusc_luad/2.5" targetNamespace="http://tcga.nci/bcr/xml/clinical/shared/lusc_luad/2.5" elementFormDefault="qualified" version="2.5.0"> |
+- |
|
|
| 4 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd"/> |
|
|
|
| 5 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd"/> |
|
|
|
| 6 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd"/> |
|
|
|
| 7 |
<xs:element name="egfr_mutation_result" nillable="true"> |
|
|
|
| 8 |
<xs:complexType mixed="true"> |
|
|
|
| 9 |
<xs:simpleContent> |
|
|
|
| 10 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 11 |
<xs:enumeration value=""/> |
|
|
|
| 12 |
<xs:enumeration value="G719X"/> |
|
|
|
| 13 |
<xs:enumeration value="Exon 19 Deletion"/> |
|
|
|
| 14 |
<xs:enumeration value="Exon 20 Insertion"/> |
|
|
|
| 15 |
<xs:enumeration value="T790M"/> |
|
|
|
| 16 |
<xs:enumeration value="L858R"/> |
|
|
|
| 17 |
<xs:enumeration value="L861Q"/> |
|
|
|
| 18 |
<xs:enumeration value="Other"/> |
|
|
|
| 19 |
<xs:attribute name="cde" type="xs:string" default="3147627"/> |
|
|
|
| 20 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 21 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 22 |
</xs:restriction> |
|
|
|
| 23 |
</xs:simpleContent> |
|
|
|
| 24 |
</xs:complexType> |
|
|
|
| 25 |
</xs:element> |
|
|
|
| 26 |
<xs:element name="eml4_alk_translocation_result" nillable="true"> |
|
|
|
| 27 |
<xs:complexType mixed="true"> |
|
|
|
| 28 |
<xs:simpleContent> |
|
|
|
| 29 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 30 |
<xs:enumeration value=""/> |
|
|
|
| 31 |
<xs:enumeration value="Variant 1"/> |
|
|
|
| 32 |
<xs:enumeration value="Variant 2"/> |
|
|
|
| 33 |
<xs:enumeration value="Variant 3"/> |
|
|
|
| 34 |
<xs:enumeration value="Variant 4"/> |
|
|
|
| 35 |
<xs:enumeration value="Variant 5"/> |
|
|
|
| 36 |
<xs:attribute name="cde" type="xs:string" default="3139445"/> |
|
|
|
| 37 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 38 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 39 |
</xs:restriction> |
|
|
|
| 40 |
</xs:simpleContent> |
|
|
|
| 41 |
</xs:complexType> |
|
|
|
| 42 |
</xs:element> |
|
|
|
| 43 |
<xs:element name="eml4_alk_translocation_method" nillable="true"> |
|
|
|
| 44 |
<xs:complexType mixed="true"> |
|
|
|
| 45 |
<xs:simpleContent> |
|
|
|
| 46 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 47 |
<xs:enumeration value=""/> |
|
|
|
| 48 |
<xs:enumeration value="IHC"/> |
|
|
|
| 49 |
<xs:enumeration value="FISH"/> |
|
|
|
| 50 |
<xs:enumeration value="RT-PCR"/> |
|
|
|
| 51 |
<xs:enumeration value="Other"/> |
|
|
|
| 52 |
<xs:attribute name="cde" type="xs:string" default="3139449"/> |
|
|
|
| 53 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 54 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 55 |
</xs:restriction> |
|
|
|
| 56 |
</xs:simpleContent> |
|
|
|
| 57 |
</xs:complexType> |
|
|
|
| 58 |
</xs:element> |
|
|
|
| 59 |
<xs:element name="egfr_mutation_performed" nillable="true"> |
|
|
|
| 60 |
<xs:complexType> |
|
|
|
| 61 |
<xs:simpleContent> |
|
|
|
| 62 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 63 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 64 |
<xs:attribute name="cde" type="xs:string" default="3139429"/> |
|
|
|
| 65 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 66 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 67 |
</xs:extension> |
|
|
|
| 68 |
</xs:simpleContent> |
|
|
|
| 69 |
</xs:complexType> |
|
|
|
| 70 |
</xs:element> |
|
|
|
| 71 |
<xs:element name="eml4_alk_translocation_performed" nillable="true"> |
|
|
|
| 72 |
<xs:complexType> |
|
|
|
| 73 |
<xs:simpleContent> |
|
|
|
| 74 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 75 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 76 |
<xs:attribute name="cde" type="xs:string" default="3139437"/> |
|
|
|
| 77 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 78 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 79 |
</xs:extension> |
|
|
|
| 80 |
</xs:simpleContent> |
|
|
|
| 81 |
</xs:complexType> |
|
|
|
| 82 |
</xs:element> |
|
|
|
| 83 |
<xs:element name="histological_type" nillable="true"> |
|
|
|
| 84 |
<xs:complexType mixed="true"> |
|
|
|
| 85 |
<xs:simpleContent> |
|
|
|
| 86 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 87 |
<xs:attribute name="cde" type="xs:string" default="3081934"/> |
|
|
|
| 88 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.9"/> |
|
|
|
| 89 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 90 |
</xs:restriction> |
|
|
|
| 91 |
</xs:simpleContent> |
|
|
|
| 92 |
</xs:complexType> |
|
|
|
| 93 |
</xs:element> |
|
|
|
| 94 |
<xs:element name="diagnosis" nillable="true"> |
|
|
|
| 95 |
<xs:complexType mixed="true"> |
|
|
|
| 96 |
<xs:simpleContent> |
|
|
|
| 97 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 98 |
<xs:attribute name="cde" type="xs:string" default="3081932"/> |
|
|
|
| 99 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 100 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 101 |
</xs:restriction> |
|
|
|
| 102 |
</xs:simpleContent> |
|
|
|
| 103 |
</xs:complexType> |
|
|
|
| 104 |
</xs:element> |
|
|
|
| 105 |
<xs:element name="location_in_lung_parenchyma" nillable="true"> |
|
|
|
| 106 |
<xs:complexType mixed="true"> |
|
|
|
| 107 |
<xs:simpleContent> |
|
|
|
| 108 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 109 |
<xs:enumeration value=""/> |
|
|
|
| 110 |
<xs:enumeration value="Peripheral Lung"/> |
|
|
|
| 111 |
<xs:enumeration value="Central Lung"/> |
|
|
|
| 112 |
<xs:attribute name="cde" type="xs:string" default="3139453"/> |
|
|
|
| 113 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 114 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 115 |
</xs:restriction> |
|
|
|
| 116 |
</xs:simpleContent> |
|
|
|
| 117 |
</xs:complexType> |
|
|
|
| 118 |
</xs:element> |
|
|
|
| 119 |
<xs:element name="kras_mutation_result" nillable="true"> |
|
|
|
| 120 |
<xs:complexType mixed="true"> |
|
|
|
| 121 |
<xs:simpleContent> |
|
|
|
| 122 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 123 |
<xs:enumeration value=""/> |
|
|
|
| 124 |
<xs:enumeration value="G12A"/> |
|
|
|
| 125 |
<xs:enumeration value="G12C"/> |
|
|
|
| 126 |
<xs:enumeration value="G12D"/> |
|
|
|
| 127 |
<xs:enumeration value="G12R"/> |
|
|
|
| 128 |
<xs:enumeration value="G12S"/> |
|
|
|
| 129 |
<xs:enumeration value="G12V"/> |
|
|
|
| 130 |
<xs:enumeration value="G13D"/> |
|
|
|
| 131 |
<xs:enumeration value="Other"/> |
|
|
|
| 132 |
<xs:attribute name="cde" type="xs:string" default="3147614"/> |
|
|
|
| 133 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 134 |
<xs:attribute name="tier" type="xs:string" default="2"/> |
|
|
|
| 135 |
</xs:restriction> |
|
|
|
| 136 |
</xs:simpleContent> |
|
|
|
| 137 |
</xs:complexType> |
|
|
|
| 138 |
</xs:element> |
|
|
|
| 139 |
<xs:element name="tobacco_smoking_history_indicator" nillable="true"> |
|
|
|
| 140 |
<xs:complexType> |
|
|
|
| 141 |
<xs:simpleContent> |
|
|
|
| 142 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 143 |
<xs:enumeration value=""/> |
|
|
|
| 144 |
<xs:enumeration value="Lifelong Non-smoker"/> |
|
|
|
| 145 |
<xs:enumeration value="Current smoker"/> |
|
|
|
| 146 |
<xs:enumeration value="Current reformed smoker for > 15 years"/> |
|
|
|
| 147 |
<xs:enumeration value="Current reformed smoker for < or = 15 years"/> |
|
|
|
| 148 |
<xs:attribute name="cde" type="xs:string" default="2181650"/> |
|
|
|
| 149 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 150 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 151 |
</xs:restriction> |
|
|
|
| 152 |
</xs:simpleContent> |
|
|
|
| 153 |
</xs:complexType> |
|
|
|
| 154 |
</xs:element> |
|
|
|
| 155 |
<xs:element name="year_of_tobacco_smoking_onset" nillable="true"> |
|
|
|
| 156 |
<xs:complexType mixed="true"> |
|
|
|
| 157 |
<xs:simpleContent> |
|
|
|
| 158 |
<xs:extension base="utility:generic_year"> |
|
|
|
| 159 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 160 |
<xs:attribute name="cde" type="xs:string" default="2228604"/> |
|
|
|
| 161 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 162 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 163 |
</xs:extension> |
|
|
|
| 164 |
</xs:simpleContent> |
|
|
|
| 165 |
</xs:complexType> |
|
|
|
| 166 |
</xs:element> |
|
|
|
| 167 |
<xs:element name="kras_mutation_found" nillable="true"> |
|
|
|
| 168 |
<xs:complexType> |
|
|
|
| 169 |
<xs:simpleContent> |
|
|
|
| 170 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 171 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 172 |
<xs:attribute name="cde" type="xs:string" default="2932340"/> |
|
|
|
| 173 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 174 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 175 |
</xs:extension> |
|
|
|
| 176 |
</xs:simpleContent> |
|
|
|
| 177 |
</xs:complexType> |
|
|
|
| 178 |
</xs:element> |
|
|
|
| 179 |
<xs:element name="kras_gene_analysis_performed" nillable="true"> |
|
|
|
| 180 |
<xs:complexType> |
|
|
|
| 181 |
<xs:simpleContent> |
|
|
|
| 182 |
<xs:extension base="utility:yes_or_no"> |
|
|
|
| 183 |
<xs:attributeGroup ref="utility:common_ext_attribute_group"/> |
|
|
|
| 184 |
<xs:attribute name="cde" type="xs:string" default="3123147"/> |
|
|
|
| 185 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3"/> |
|
|
|
| 186 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 187 |
</xs:extension> |
|
|
|
| 188 |
</xs:simpleContent> |
|
|
|
| 189 |
</xs:complexType> |
|
|
|
| 190 |
</xs:element> |
|
|
|
| 191 |
<xs:element name="residual_tumor" nillable="true"> |
|
|
|
| 192 |
<xs:complexType> |
|
|
|
| 193 |
<xs:simpleContent> |
|
|
|
| 194 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 195 |
<xs:enumeration value=""/> |
|
|
|
| 196 |
<xs:enumeration value="RX"/> |
|
|
|
| 197 |
<xs:enumeration value="R0"/> |
|
|
|
| 198 |
<xs:enumeration value="R1"/> |
|
|
|
| 199 |
<xs:enumeration value="R2"/> |
|
|
|
| 200 |
<xs:attribute name="cde" type="xs:string" default="2608702"/> |
|
|
|
| 201 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11"/> |
|
|
|
| 202 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 203 |
</xs:restriction> |
|
|
|
| 204 |
</xs:simpleContent> |
|
|
|
| 205 |
</xs:complexType> |
|
|
|
| 206 |
</xs:element> |
|
|
|
| 207 |
<xs:element name="primary_tumor_pathologic_spread" nillable="true"> |
|
|
|
| 208 |
<xs:complexType> |
|
|
|
| 209 |
<xs:simpleContent> |
|
|
|
| 210 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 211 |
<xs:enumeration value=""/> |
|
|
|
| 212 |
<xs:enumeration value="TX"/> |
|
|
|
| 213 |
<xs:enumeration value="T0"/> |
|
|
|
| 214 |
<xs:enumeration value="Tis"/> |
|
|
|
| 215 |
<xs:enumeration value="T1"/> |
|
|
|
| 216 |
<xs:enumeration value="T1a"/> |
|
|
|
| 217 |
<xs:enumeration value="T1b"/> |
|
|
|
| 218 |
<xs:enumeration value="T2"/> |
|
|
|
| 219 |
<xs:enumeration value="T2a"/> |
|
|
|
| 220 |
<xs:enumeration value="T2b"/> |
|
|
|
| 221 |
<xs:enumeration value="T3"/> |
|
|
|
| 222 |
<xs:enumeration value="T4"/> |
|
|
|
| 223 |
<xs:attribute name="cde" type="xs:string" default="3045435"/> |
|
|
|
| 224 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1"/> |
|
|
|
| 225 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 226 |
</xs:restriction> |
|
|
|
| 227 |
</xs:simpleContent> |
|
|
|
| 228 |
</xs:complexType> |
|
|
|
| 229 |
</xs:element> |
|
|
|
| 230 |
<xs:element name="lymphnode_pathologic_spread" nillable="true"> |
|
|
|
| 231 |
<xs:complexType> |
|
|
|
| 232 |
<xs:simpleContent> |
|
|
|
| 233 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 234 |
<xs:enumeration value=""/> |
|
|
|
| 235 |
<xs:enumeration value="NX"/> |
|
|
|
| 236 |
<xs:enumeration value="N0"/> |
|
|
|
| 237 |
<xs:enumeration value="N1"/> |
|
|
|
| 238 |
<xs:enumeration value="N2"/> |
|
|
|
| 239 |
<xs:enumeration value="N3"/> |
|
|
|
| 240 |
<xs:attribute name="cde" type="xs:string" default="3065858"/> |
|
|
|
| 241 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1"/> |
|
|
|
| 242 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 243 |
</xs:restriction> |
|
|
|
| 244 |
</xs:simpleContent> |
|
|
|
| 245 |
</xs:complexType> |
|
|
|
| 246 |
</xs:element> |
|
|
|
| 247 |
<xs:element name="distant_metastasis_pathologic_spread" nillable="true"> |
|
|
|
| 248 |
<xs:complexType> |
|
|
|
| 249 |
<xs:simpleContent> |
|
|
|
| 250 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 251 |
<xs:enumeration value=""/> |
|
|
|
| 252 |
<xs:enumeration value="M0"/> |
|
|
|
| 253 |
<xs:enumeration value="M1"/> |
|
|
|
| 254 |
<xs:enumeration value="M1a"/> |
|
|
|
| 255 |
<xs:enumeration value="M1b"/> |
|
|
|
| 256 |
<xs:enumeration value="MX"/> |
|
|
|
| 257 |
<xs:attribute name="cde" type="xs:string" default="3045439"/> |
|
|
|
| 258 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4"/> |
|
|
|
| 259 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 260 |
</xs:restriction> |
|
|
|
| 261 |
</xs:simpleContent> |
|
|
|
| 262 |
</xs:complexType> |
|
|
|
| 263 |
</xs:element> |
|
|
|
| 264 |
<xs:element name="tumor_stage" nillable="true"> |
|
|
|
| 265 |
<xs:complexType> |
|
|
|
| 266 |
<xs:simpleContent> |
|
|
|
| 267 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 268 |
<xs:enumeration value=""/> |
|
|
|
| 269 |
<xs:enumeration value="Stage I"/> |
|
|
|
| 270 |
<xs:enumeration value="Stage IA"/> |
|
|
|
| 271 |
<xs:enumeration value="Stage IB"/> |
|
|
|
| 272 |
<xs:enumeration value="Stage II"/> |
|
|
|
| 273 |
<xs:enumeration value="Stage IIA"/> |
|
|
|
| 274 |
<xs:enumeration value="Stage IIB"/> |
|
|
|
| 275 |
<xs:enumeration value="Stage III"/> |
|
|
|
| 276 |
<xs:enumeration value="Stage IIIA"/> |
|
|
|
| 277 |
<xs:enumeration value="Stage IIIB"/> |
|
|
|
| 278 |
<xs:enumeration value="Stage IV"/> |
|
|
|
| 279 |
<xs:attribute name="cde" type="xs:string" default="3065862"/> |
|
|
|
| 280 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4"/> |
|
|
|
| 281 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 282 |
</xs:restriction> |
|
|
|
| 283 |
</xs:simpleContent> |
|
|
|
| 284 |
</xs:complexType> |
|
|
|
| 285 |
</xs:element> |
|
|
|
| 286 |
<xs:element name="clinical_cqcf"> |
|
|
|
| 287 |
<xs:complexType> |
|
|
|
| 288 |
<xs:sequence> |
|
|
|
| 289 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
|
|
|
| 290 |
<xs:element ref="cqcf:history_of_prior_malignancy"/> |
|
|
|
| 291 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
|
|
| 292 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
|
|
| 293 |
<xs:choice> |
|
|
|
| 294 |
<xs:choice> |
|
|
|
| 295 |
<xs:sequence> |
|
|
|
| 296 |
<xs:element ref="cqcf:day_of_consent"/> |
|
|
|
| 297 |
<xs:element ref="cqcf:month_of_consent"/> |
|
|
|
| 298 |
<xs:element ref="cqcf:year_of_consent"/> |
|
|
|
| 299 |
</xs:sequence> |
|
|
|
| 300 |
<xs:element ref="cqcf:days_to_consent"/> |
|
|
|
| 301 |
</xs:choice> |
|
|
|
| 302 |
<xs:choice> |
|
|
|
| 303 |
<xs:sequence> |
|
|
|
| 304 |
<xs:element ref="shared:day_of_death"/> |
|
|
|
| 305 |
<xs:element ref="shared:month_of_death"/> |
|
|
|
| 306 |
<xs:element ref="shared:year_of_death"/> |
|
|
|
| 307 |
</xs:sequence> |
|
|
|
| 308 |
<xs:element ref="shared:days_to_death"/> |
|
|
|
| 309 |
</xs:choice> |
|
|
|
| 310 |
</xs:choice> |
|
|
|
| 311 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
|
|
|
| 312 |
<xs:element ref="shared:prior_diagnosis"/> |
|
|
|
| 313 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
|
|
|
| 314 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
|
|
| 315 |
<xs:element ref="cqcf:tumor_type"/> |
|
|
|
| 316 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
|
|
| 317 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
|
|
|
| 318 |
<xs:element ref="cqcf:country"/> |
|
|
|
| 319 |
</xs:sequence> |
|
|
|
| 320 |
</xs:complexType> |
|
|
|
| 321 |
</xs:element> |
|
|
|
| 322 |
</xs:schema> |
|
|
|
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 11 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 12 |
xmlns:cesc_shared="http://tcga.nci/bcr/xml/clinical/skcm/shared/2.5" |
|
|
|
| 13 |
xmlns:follow_up_v2.0="http://tcga.nci/bcr/xml/clinical/skcm/followup/2.5/2.0" |
|
|
|
| 14 |
xmlns="http://tcga.nci/bcr/xml/clinical/skcm/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/skcm/2.4" |
| 15 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/skcm/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/skcm/2.4" |
| |
| 31 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/skcm/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/skcm/shared/2.5/TCGA_BCR.SKCM_Clinical_Shared_Datatypes.xsd" /> |
|
|
|
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/skcm/followup/2.5/2.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/skcm/followup/2.5/TCGA_BCR.SKCM_Clinical_FollowUp_v2.0.xsd" /> |
|
|
|
| |
| 101 |
<xs:element ref="shared:ajcc_tumor_stage_code" /> |
<> |
95 |
<xs:element ref="ajcc_tumor_stage_code" /> |
| 102 |
<xs:element ref="shared:ajcc_neoplasm_disease_lymph_node_stage" /> |
|
96 |
<xs:element ref="ajcc_neoplasm_disease_lymph_node_stage" /> |
| 103 |
<xs:element ref="shared:ajcc_cancer_metastasis_stage_code" /> |
|
97 |
<xs:element ref="ajcc_cancer_metastasis_stage_code" /> |
| 104 |
<xs:element ref="shared:ajcc_neoplasm_disease_stage" /> |
|
98 |
<xs:element ref="ajcc_neoplasm_disease_stage" /> |
| |
| 124 |
<xs:element ref="melanoma_ulceration_indicator" /> |
+- |
|
|
| |
| |
|
-+ |
119 |
<xs:element ref="melanoma_ulceration_indicator" /> |
| |
| 132 |
<xs:element ref="shared:lactate_dehydrogenase_result" /> |
<> |
126 |
<xs:element ref="lab_procedure_lactate_dehydrogenase_summary" /> |
| |
| 142 |
<xs:element ref="follow_ups" /> |
+- |
|
|
| |
| 145 |
<xs:element ref="clinical_cqcf" /> |
+- |
|
|
| 146 |
</xs:sequence> |
|
|
|
| 147 |
</xs:complexType> |
|
|
|
| 148 |
</xs:element> |
|
|
|
| |
| 150 |
<xs:element name="follow_ups"> |
+- |
|
|
| 151 |
<xs:annotation> |
|
|
|
| 152 |
<xs:documentation xml:lang="en">We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
|
|
| 153 |
</xs:annotation> |
|
|
|
| 154 |
<xs:complexType> |
|
|
|
| 155 |
<xs:sequence> |
|
|
|
| 156 |
<xs:element ref="follow_up_v2.0:follow_up_v2.0" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| 157 |
</xs:sequence> |
|
|
|
| 158 |
</xs:complexType> |
|
|
|
| 159 |
</xs:element> |
|
|
|
| |
| 161 |
<xs:element name="clinical_cqcf"> |
+- |
|
|
| 162 |
<xs:complexType> |
|
|
|
| 163 |
<xs:sequence> |
|
|
|
| 164 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
|
|
|
| 165 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
|
|
| |
| 167 |
<xs:choice> |
+- |
|
|
| 168 |
<xs:choice> |
|
|
|
| 169 |
<xs:sequence> |
|
|
|
| 170 |
<xs:element ref="cqcf:day_of_consent"/> |
|
|
|
| 171 |
<xs:element ref="cqcf:month_of_consent"/> |
|
|
|
| 172 |
<xs:element ref="cqcf:year_of_consent"/> |
|
|
|
| 173 |
</xs:sequence> |
|
|
|
| |
| 175 |
<xs:element ref="cqcf:days_to_consent"/> |
+- |
|
|
| 176 |
</xs:choice> |
|
|
|
| |
| 178 |
<xs:choice> |
+- |
|
|
| 179 |
<xs:sequence> |
|
|
|
| 180 |
<xs:element ref="shared:day_of_death"/> |
|
|
|
| 181 |
<xs:element ref="shared:month_of_death"/> |
|
|
|
| 182 |
<xs:element ref="shared:year_of_death"/> |
|
|
|
| 183 |
</xs:sequence> |
|
|
|
| |
| 185 |
<xs:element ref="shared:days_to_death"/> |
+- |
|
|
| 186 |
</xs:choice> |
|
|
|
| 187 |
</xs:choice> |
|
|
|
| |
| 189 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
+- |
|
|
| 190 |
<xs:element ref="shared:prior_diagnosis"/> |
|
|
|
| 191 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
|
|
| 192 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
|
|
|
| 193 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
|
|
| 194 |
<xs:element ref="cqcf:tumor_focality"/> |
|
|
|
| 195 |
<xs:element ref="cqcf:tumor_type"/> |
|
|
|
| 196 |
<xs:element ref="cqcf:other_diagnosis"/> |
|
|
|
| 197 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
|
|
| 198 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
|
|
|
| 199 |
<xs:element ref="cqcf:country"/> |
|
|
|
| |
| |
|
-+ |
334 |
<xs:element name="lab_procedure_lactate_dehydrogenase_summary" nillable="true"> |
| |
|
|
335 |
<xs:complexType mixed="true"> |
| |
|
|
336 |
<xs:simpleContent> |
| |
|
|
337 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
338 |
<xs:enumeration value="" /> |
| |
|
|
339 |
<xs:enumeration value="Elevated" /> |
| |
|
|
340 |
<xs:enumeration value="Low" /> |
| |
|
|
341 |
<xs:enumeration value="Normal" /> |
| |
|
|
342 |
<xs:attribute name="cde" type="xs:string" default="3113468" /> |
| |
|
|
343 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
344 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
345 |
</xs:restriction> |
| |
|
|
346 |
</xs:simpleContent> |
| |
|
|
347 |
</xs:complexType> |
| |
|
|
348 |
</xs:element> |
| |
| |
|
-+ |
350 |
<xs:element name="ajcc_tumor_stage_code" nillable="true"> |
| |
|
|
351 |
<xs:complexType mixed="true"> |
| |
|
|
352 |
<xs:simpleContent> |
| |
|
|
353 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
354 |
<xs:enumeration value="" /> |
| |
|
|
355 |
<xs:enumeration value="T0" /> |
| |
|
|
356 |
<xs:enumeration value="Ta" /> |
| |
|
|
357 |
<xs:enumeration value="T1" /> |
| |
|
|
358 |
<xs:enumeration value="T1a" /> |
| |
|
|
359 |
<xs:enumeration value="T1a1" /> |
| |
|
|
360 |
<xs:enumeration value="T1a2" /> |
| |
|
|
361 |
<xs:enumeration value="T1b" /> |
| |
|
|
362 |
<xs:enumeration value="T1c" /> |
| |
|
|
363 |
<xs:enumeration value="T1mi" /> |
| |
|
|
364 |
<xs:enumeration value="T2" /> |
| |
|
|
365 |
<xs:enumeration value="T2a" /> |
| |
|
|
366 |
<xs:enumeration value="T2a1" /> |
| |
|
|
367 |
<xs:enumeration value="T2a2" /> |
| |
|
|
368 |
<xs:enumeration value="T2b" /> |
| |
|
|
369 |
<xs:enumeration value="T2c" /> |
| |
|
|
370 |
<xs:enumeration value="T3" /> |
| |
|
|
371 |
<xs:enumeration value="T3a" /> |
| |
|
|
372 |
<xs:enumeration value="T3b" /> |
| |
|
|
373 |
<xs:enumeration value="T3c" /> |
| |
|
|
374 |
<xs:enumeration value="T4" /> |
| |
|
|
375 |
<xs:enumeration value="T4a" /> |
| |
|
|
376 |
<xs:enumeration value="T4b" /> |
| |
|
|
377 |
<xs:enumeration value="T4c" /> |
| |
|
|
378 |
<xs:enumeration value="T4d" /> |
| |
|
|
379 |
<xs:enumeration value="Tis" /> |
| |
|
|
380 |
<xs:enumeration value="Tis (DCIS)" /> |
| |
|
|
381 |
<xs:enumeration value="Tis (LCIS)" /> |
| |
|
|
382 |
<xs:enumeration value="Tis (Paget's)" /> |
| |
|
|
383 |
<xs:enumeration value="TX" /> |
| |
|
|
384 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
385 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
| |
|
|
386 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
387 |
</xs:restriction> |
| |
|
|
388 |
</xs:simpleContent> |
| |
|
|
389 |
</xs:complexType> |
| |
|
|
390 |
</xs:element> |
| |
| |
|
-+ |
392 |
<xs:element name="ajcc_neoplasm_disease_lymph_node_stage" nillable="true"> |
| |
|
|
393 |
<xs:complexType mixed="true"> |
| |
|
|
394 |
<xs:simpleContent> |
| |
|
|
395 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
396 |
<xs:enumeration value="" /> |
| |
|
|
397 |
<xs:enumeration value="NX" /> |
| |
|
|
398 |
<xs:enumeration value="N0" /> |
| |
|
|
399 |
<xs:enumeration value="N0 (i-)" /> |
| |
|
|
400 |
<xs:enumeration value="N0 (i+)" /> |
| |
|
|
401 |
<xs:enumeration value="N0 (mol-)" /> |
| |
|
|
402 |
<xs:enumeration value="N0 (mol+)" /> |
| |
|
|
403 |
<xs:enumeration value="N1" /> |
| |
|
|
404 |
<xs:enumeration value="N1mi" /> |
| |
|
|
405 |
<xs:enumeration value="N1a" /> |
| |
|
|
406 |
<xs:enumeration value="N1b" /> |
| |
|
|
407 |
<xs:enumeration value="N1bI" /> |
| |
|
|
408 |
<xs:enumeration value="N1bII" /> |
| |
|
|
409 |
<xs:enumeration value="N1bIII" /> |
| |
|
|
410 |
<xs:enumeration value="N1bIV" /> |
| |
|
|
411 |
<xs:enumeration value="N1c" /> |
| |
|
|
412 |
<xs:enumeration value="N2" /> |
| |
|
|
413 |
<xs:enumeration value="N2a" /> |
| |
|
|
414 |
<xs:enumeration value="N2b" /> |
| |
|
|
415 |
<xs:enumeration value="N3" /> |
| |
|
|
416 |
<xs:enumeration value="N3a" /> |
| |
|
|
417 |
<xs:enumeration value="N3b" /> |
| |
|
|
418 |
<xs:enumeration value="N3c" /> |
| |
|
|
419 |
<xs:enumeration value="N4" /> |
| |
|
|
420 |
<xs:attribute name="cde" type="xs:string" default="3203106" /> |
| |
|
|
421 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
| |
|
|
422 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
423 |
</xs:restriction> |
| |
|
|
424 |
</xs:simpleContent> |
| |
|
|
425 |
</xs:complexType> |
| |
|
|
426 |
</xs:element> |
| |
| |
|
-+ |
428 |
<xs:element name="ajcc_cancer_metastasis_stage_code" nillable="true"> |
| |
|
|
429 |
<xs:complexType mixed="true"> |
| |
|
|
430 |
<xs:simpleContent> |
| |
|
|
431 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
432 |
<xs:enumeration value="" /> |
| |
|
|
433 |
<xs:enumeration value="cM0 (i+)" /> |
| |
|
|
434 |
<xs:enumeration value="M0" /> |
| |
|
|
435 |
<xs:enumeration value="M1" /> |
| |
|
|
436 |
<xs:enumeration value="M1a" /> |
| |
|
|
437 |
<xs:enumeration value="M1b" /> |
| |
|
|
438 |
<xs:enumeration value="M1c" /> |
| |
|
|
439 |
<xs:enumeration value="MX" /> |
| |
|
|
440 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
441 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
| |
|
|
442 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
443 |
</xs:restriction> |
| |
|
|
444 |
</xs:simpleContent> |
| |
|
|
445 |
</xs:complexType> |
| |
|
|
446 |
</xs:element> |
| |
| |
|
-+ |
448 |
<xs:element name="ajcc_neoplasm_disease_stage" nillable="true"> |
| |
|
|
449 |
<xs:complexType mixed="true"> |
| |
|
|
450 |
<xs:simpleContent> |
| |
|
|
451 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
452 |
<xs:enumeration value="" /> |
| |
|
|
453 |
<xs:enumeration value="Stage X" /> |
| |
|
|
454 |
<xs:enumeration value="Stage Tis" /> |
| |
|
|
455 |
<xs:enumeration value="Stage 0" /> |
| |
|
|
456 |
<xs:enumeration value="Stage I" /> |
| |
|
|
457 |
<xs:enumeration value="Stage IA" /> |
| |
|
|
458 |
<xs:enumeration value="Stage IB" /> |
| |
|
|
459 |
<xs:enumeration value="Stage II" /> |
| |
|
|
460 |
<xs:enumeration value="Stage IIA" /> |
| |
|
|
461 |
<xs:enumeration value="Stage IIB" /> |
| |
|
|
462 |
<xs:enumeration value="Stage IIC" /> |
| |
|
|
463 |
<xs:enumeration value="Stage III" /> |
| |
|
|
464 |
<xs:enumeration value="Stage IIIA" /> |
| |
|
|
465 |
<xs:enumeration value="Stage IIIB" /> |
| |
|
|
466 |
<xs:enumeration value="Stage IIIC" /> |
| |
|
|
467 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
468 |
<xs:enumeration value="Stage IVA" /> |
| |
|
|
469 |
<xs:enumeration value="Stage IVB" /> |
| |
|
|
470 |
<xs:enumeration value="Stage IIA Cervix" /> |
| |
|
|
471 |
<xs:enumeration value="Stage II Cervix" /> |
| |
|
|
472 |
<xs:enumeration value="Stage IB2" /> |
| |
|
|
473 |
<xs:enumeration value="Stage IB1" /> |
| |
|
|
474 |
<xs:enumeration value="Stage IB Cervix" /> |
| |
|
|
475 |
<xs:enumeration value="Stage IA2" /> |
| |
|
|
476 |
<xs:enumeration value="Stage IA1" /> |
| |
|
|
477 |
<xs:enumeration value="Stage IVC" /> |
| |
|
|
478 |
<xs:enumeration value="Stage 0is" /> |
| |
|
|
479 |
<xs:enumeration value="Stage 0a" /> |
| |
|
|
480 |
<xs:attribute name="cde" type="xs:string" default="3203222" /> |
| |
|
|
481 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
| |
|
|
482 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
483 |
</xs:restriction> |
| |
|
|
484 |
</xs:simpleContent> |
| |
|
|
485 |
</xs:complexType> |
| |
|
|
486 |
</xs:element> |
| 3 |
<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" xmlns:follow_up_v1.0="http://tcga.nci/bcr/xml/clinical/stad/followup/2.5/1.0" xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" xmlns="http://tcga.nci/bcr/xml/clinical/stad/2.5" xmlns:jaxb="http://java.sun.com/xml/ns/jaxb" targetNamespace="http://tcga.nci/bcr/xml/clinical/stad/2.5" elementFormDefault="qualified" version="2.5.0" jaxb:version="1.0"> |
<> |
3 |
|
| |
|
|
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
|
|
5 |
xmlns:xs="http://www.w3.org/2001/XMLSchema" |
| |
|
|
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| |
|
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| |
|
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| |
|
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| |
|
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| |
|
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/stad/2.4" |
| |
|
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/stad/2.4" |
| |
|
|
13 |
xmlns:jaxb="http://java.sun.com/xml/ns/jaxb" jaxb:version="1.0"> |
| |
| 15 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd"/> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 16 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd"/> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 17 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd"/> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 18 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd"/> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 19 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd"/> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 20 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/stad/followup/2.5/1.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/stad/followup/2.5/TCGA_BCR.STAD_Clinical_FollowUp_v1.0.xsd"/> |
|
33 |
|
| 21 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd"/> |
|
|
|
| |
| 28 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 96 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
<> |
124 |
<xs:element ref="anatomic_organ_subdivision" /> |
| 97 |
<xs:element ref="shared:primary_lymph_node_presentation_assessment"/> |
|
|
|
| 98 |
<xs:element ref="shared:lymph_node_examined_count"/> |
|
125 |
<xs:element ref="lymphnodes_examined" /> |
| 99 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_he"/> |
|
126 |
<xs:element ref="number_of_lymphnodes_examined" /> |
| 100 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_ihc"/> |
|
127 |
<xs:element ref="number_of_lymphnodes_positive_by_he" /> |
| |
| 104 |
<xs:element ref="shared:neoplasm_histologic_grade"/> |
<> |
131 |
<xs:element ref="tumor_grade" /> |
| |
| 107 |
<xs:element ref="shared:residual_tumor"/> |
<> |
134 |
<xs:element ref="residual_tumor" /> |
| |
|
|
135 |
<xs:element ref="ajcc_handbook_addition" /> |
| |
| 117 |
<xs:element ref="clinical_cqcf"/> |
+- |
|
|
| 118 |
<xs:element name="follow_ups"> |
|
|
|
| 119 |
<xs:annotation> |
|
|
|
| 120 |
<xs:documentation>We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
|
|
| 121 |
</xs:annotation> |
|
|
|
| 122 |
<xs:complexType> |
|
|
|
| 123 |
<xs:sequence> |
|
|
|
| 124 |
<xs:element ref="follow_up_v1.0:follow_up_v1.0" minOccurs="0" maxOccurs="unbounded"/> |
|
|
|
| |
| 128 |
</xs:sequence> |
<> |
148 |
|
| 129 |
</xs:complexType> |
|
|
|
| 130 |
</xs:element> |
|
|
|
| 131 |
<xs:element name="clinical_cqcf"> |
|
|
|
| 132 |
<xs:complexType> |
|
|
|
| 133 |
<xs:sequence> |
|
|
|
| 134 |
<xs:element ref="cqcf:frozen_specimen_anatomic_site"/> |
|
|
|
| 135 |
<xs:element ref="cqcf:history_of_prior_malignancy"/> |
|
|
|
| 136 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
|
|
| 137 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
|
|
| 138 |
<xs:choice> |
|
|
|
| 139 |
<xs:choice> |
|
|
|
| 140 |
<xs:sequence> |
|
|
|
| 141 |
<xs:element ref="cqcf:day_of_consent"/> |
|
|
|
| 142 |
<xs:element ref="cqcf:month_of_consent"/> |
|
|
|
| 143 |
<xs:element ref="cqcf:year_of_consent"/> |
|
|
|
| 144 |
</xs:sequence> |
|
|
|
| 145 |
<xs:element ref="cqcf:days_to_consent"/> |
|
|
|
| 146 |
</xs:choice> |
|
|
|
| 147 |
<xs:choice> |
|
|
|
| 148 |
<xs:sequence> |
|
|
|
| 149 |
<xs:element ref="shared:day_of_death"/> |
|
|
|
| 150 |
<xs:element ref="shared:month_of_death"/> |
|
|
|
| 151 |
<xs:element ref="shared:year_of_death"/> |
|
|
|
| 152 |
</xs:sequence> |
|
|
|
| 153 |
<xs:element ref="shared:days_to_death"/> |
|
|
|
| 154 |
</xs:choice> |
|
|
|
| 155 |
</xs:choice> |
|
|
|
| 156 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
|
|
|
| 157 |
<xs:element ref="shared:prior_diagnosis"/> |
|
|
|
| 158 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
|
|
|
| 159 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
|
|
| 160 |
<xs:element ref="cqcf:tumor_type"/> |
|
|
|
| 161 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
|
|
| 162 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
|
|
|
| 163 |
<xs:element ref="cqcf:country"/> |
|
|
|
| 164 |
</xs:sequence> |
|
|
|
| 165 |
</xs:complexType> |
|
|
|
| 166 |
</xs:element> |
|
|
|
| |
| |
|
-+ |
201 |
<xs:element name="tumor_grade" nillable="true"> |
| |
|
|
202 |
<xs:complexType> |
| |
|
|
203 |
<xs:simpleContent> |
| |
|
|
204 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
205 |
<xs:enumeration value="" /> |
| |
|
|
206 |
<xs:enumeration value="GX" /> |
| |
|
|
207 |
<xs:enumeration value="G1" /> |
| |
|
|
208 |
<xs:enumeration value="G2" /> |
| |
|
|
209 |
<xs:enumeration value="G3" /> |
| |
|
|
210 |
<xs:attribute name="cde" type="xs:string" default="2785839" /> |
| |
|
|
211 |
<xs:attribute name="xsd_ver" type="xs:string" default="1.11" /> |
| |
|
|
212 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
213 |
</xs:restriction> |
| |
|
|
214 |
</xs:simpleContent> |
| |
|
|
215 |
</xs:complexType> |
| |
|
|
216 |
</xs:element> |
| |
| |
|
-+ |
218 |
<xs:element name="residual_tumor" nillable="true"> |
| |
|
|
219 |
<xs:complexType> |
| |
|
|
220 |
<xs:simpleContent> |
| |
|
|
221 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
222 |
<xs:enumeration value="" /> |
| |
|
|
223 |
<xs:enumeration value="RX" /> |
| |
|
|
224 |
<xs:enumeration value="R0" /> |
| |
|
|
225 |
<xs:enumeration value="R1" /> |
| |
|
|
226 |
<xs:enumeration value="R2" /> |
| |
|
|
227 |
<xs:attribute name="cde" type="xs:string" default="2608702" /> |
| |
|
|
228 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
229 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
230 |
</xs:restriction> |
| |
|
|
231 |
</xs:simpleContent> |
| |
|
|
232 |
</xs:complexType> |
| |
|
|
233 |
</xs:element> |
| |
| |
|
-+ |
235 |
<xs:element name="ajcc_handbook_addition" nillable="true"> |
| |
|
|
236 |
<xs:complexType> |
| |
|
|
237 |
<xs:simpleContent> |
| |
|
|
238 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
239 |
<xs:enumeration value="" /> |
| |
|
|
240 |
<xs:enumeration value="First Edition" /> |
| |
|
|
241 |
<xs:enumeration value="Second Edition" /> |
| |
|
|
242 |
<xs:enumeration value="Third Edition" /> |
| |
|
|
243 |
<xs:enumeration value="Fourth Edition" /> |
| |
|
|
244 |
<xs:enumeration value="Fifth Edition" /> |
| |
|
|
245 |
<xs:enumeration value="Sixth Edition" /> |
| |
|
|
246 |
<xs:enumeration value="Seventh Edition" /> |
| |
|
|
247 |
<xs:attribute name="cde" type="xs:string" default="2722309" /> |
| |
|
|
248 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
249 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
250 |
</xs:restriction> |
| |
|
|
251 |
</xs:simpleContent> |
| |
|
|
252 |
</xs:complexType> |
| |
|
|
253 |
</xs:element> |
| |
| 219 |
<xs:attribute name="cde" type="xs:string" default=""/> |
<> |
259 |
<xs:attribute name="cde" type="xs:string" default="3203072" /> |
| |
| |
|
-+ |
331 |
<xs:element name="lymphnodes_examined" nillable="true"> |
| |
|
|
332 |
<xs:complexType> |
| |
|
|
333 |
<xs:simpleContent> |
| |
|
|
334 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
335 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
336 |
<xs:attribute name="cde" type="xs:string" default="2200396" /> |
| |
|
|
337 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
338 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
339 |
</xs:extension> |
| |
|
|
340 |
</xs:simpleContent> |
| |
|
|
341 |
</xs:complexType> |
| |
|
|
342 |
</xs:element> |
| |
| |
|
-+ |
344 |
<xs:element name="number_of_lymphnodes_positive_by_he" nillable="true"> |
| |
|
|
345 |
<xs:complexType mixed="true"> |
| |
|
|
346 |
<xs:simpleContent> |
| |
|
|
347 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
348 |
<xs:attribute name="cde" type="xs:string" default="3086388" /> |
| |
|
|
349 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
350 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
351 |
</xs:restriction> |
| |
|
|
352 |
</xs:simpleContent> |
| |
|
|
353 |
</xs:complexType> |
| |
|
|
354 |
</xs:element> |
| |
| |
|
-+ |
356 |
<xs:element name="anatomic_organ_subdivision" nillable="true"> |
| |
|
|
357 |
<xs:complexType mixed="true"> |
| |
|
|
358 |
<xs:simpleContent> |
| |
|
|
359 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
360 |
<xs:enumeration value="" /> |
| |
|
|
361 |
<xs:enumeration value="Gastrostroesophageal Junction" /> |
| |
|
|
362 |
<xs:enumeration value="Cardia/Proximal" /> |
| |
|
|
363 |
<xs:enumeration value="Fundus/Body" /> |
| |
|
|
364 |
<xs:enumeration value="Antrum/Distal" /> |
| |
|
|
365 |
<xs:attribute name="cde" type="xs:string" default="2008006" /> |
| |
|
|
366 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
367 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
368 |
</xs:restriction> |
| |
|
|
369 |
</xs:simpleContent> |
| |
|
|
370 |
</xs:complexType> |
| |
|
|
371 |
</xs:element> |
| |
| |
|
-+ |
391 |
<xs:enumeration value="Stage IA" /> |
| |
|
|
392 |
<xs:enumeration value="Stage IB" /> |
| |
| |
|
-+ |
394 |
<xs:enumeration value="Stage IIA" /> |
| |
|
|
395 |
<xs:enumeration value="Stage IIB" /> |
| |
| 304 |
<xs:enumeration value="Stage IVA"/> |
<> |
397 |
<xs:enumeration value="Stage IIIA" /> |
| 305 |
<xs:enumeration value="Stage IVB"/> |
|
398 |
<xs:enumeration value="Stage IIIB" /> |
| 306 |
<xs:enumeration value="Stage IVC"/> |
|
399 |
<xs:enumeration value="Stage IIIC" /> |
| |
| 315 |
<xs:element name="lymphnode_pathologic_spread" nillable="true"> |
<> |
408 |
|
| 316 |
<xs:complexType> |
|
|
|
| 317 |
<xs:simpleContent> |
|
|
|
| 318 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 319 |
<xs:enumeration value=""/> |
|
|
|
| 320 |
<xs:enumeration value="NX"/> |
|
|
|
| 321 |
<xs:enumeration value="N0"/> |
|
|
|
| 322 |
<xs:enumeration value="N1"/> |
|
|
|
| 323 |
<xs:enumeration value="N2"/> |
|
|
|
| 324 |
<xs:enumeration value="N2a"/> |
|
|
|
| 325 |
<xs:enumeration value="N2b"/> |
|
|
|
| 326 |
<xs:enumeration value="N2c"/> |
|
|
|
| 327 |
<xs:enumeration value="N3"/> |
|
|
|
| 328 |
<xs:attribute name="cde" type="xs:string" default="3065858"/> |
|
|
|
| 329 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1"/> |
|
|
|
| 330 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 331 |
</xs:restriction> |
|
|
|
| 332 |
</xs:simpleContent> |
|
|
|
| 333 |
</xs:complexType> |
|
|
|
| 334 |
</xs:element> |
|
|
|
| 335 |
<xs:element name="distant_metastasis_pathologic_spread" nillable="true"> |
|
|
|
| 336 |
<xs:complexType> |
|
|
|
| 337 |
<xs:simpleContent> |
|
|
|
| 338 |
<xs:restriction base="utility:clinical_res_attributes"> |
|
|
|
| 339 |
<xs:enumeration value=""/> |
|
|
|
| 340 |
<xs:enumeration value="M0"/> |
|
|
|
| 341 |
<xs:enumeration value="M1"/> |
|
|
|
| 342 |
<xs:enumeration value="MX"/> |
|
|
|
| 343 |
<xs:attribute name="cde" type="xs:string" default="3045439"/> |
|
|
|
| 344 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4"/> |
|
|
|
| 345 |
<xs:attribute name="tier" type="xs:string" default="1"/> |
|
|
|
| 346 |
</xs:restriction> |
|
|
|
| 347 |
</xs:simpleContent> |
|
|
|
| 348 |
</xs:complexType> |
|
|
|
| 349 |
</xs:element> |
|
|
|
| |
| |
|
-+ |
434 |
<xs:element name="lymphnode_pathologic_spread" nillable="true"> |
| |
|
|
435 |
<xs:complexType> |
| |
|
|
436 |
<xs:simpleContent> |
| |
|
|
437 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
438 |
<xs:enumeration value="" /> |
| |
|
|
439 |
<xs:enumeration value="NX" /> |
| |
|
|
440 |
<xs:enumeration value="N0" /> |
| |
|
|
441 |
<xs:enumeration value="N1" /> |
| |
|
|
442 |
<xs:enumeration value="N2" /> |
| |
|
|
443 |
<xs:enumeration value="N3" /> |
| |
|
|
444 |
<xs:enumeration value="N3a" /> |
| |
|
|
445 |
<xs:enumeration value="N3b" /> |
| |
|
|
446 |
<xs:attribute name="cde" type="xs:string" default="3065858" /> |
| |
|
|
447 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
448 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
449 |
</xs:restriction> |
| |
|
|
450 |
</xs:simpleContent> |
| |
|
|
451 |
</xs:complexType> |
| |
|
|
452 |
</xs:element> |
| |
| |
|
-+ |
454 |
<xs:element name="distant_metastasis_pathologic_spread" nillable="true"> |
| |
|
|
455 |
<xs:complexType> |
| |
|
|
456 |
<xs:simpleContent> |
| |
|
|
457 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
458 |
<xs:enumeration value="" /> |
| |
|
|
459 |
<xs:enumeration value="MX" /> |
| |
|
|
460 |
<xs:enumeration value="M0" /> |
| |
|
|
461 |
<xs:enumeration value="M1" /> |
| |
|
|
462 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
463 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
464 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
465 |
</xs:restriction> |
| |
|
|
466 |
</xs:simpleContent> |
| |
|
|
467 |
</xs:complexType> |
| |
|
|
468 |
</xs:element> |
| |
| |
|
-+ |
470 |
<xs:element name="number_of_lymphnodes_examined" nillable="true"> |
| |
|
|
471 |
<xs:complexType mixed="true"> |
| |
|
|
472 |
<xs:simpleContent> |
| |
|
|
473 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
474 |
<xs:attribute name="cde" type="xs:string" default="3" /> |
| |
|
|
475 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.1" /> |
| |
|
|
476 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
477 |
</xs:restriction> |
| |
|
|
478 |
</xs:simpleContent> |
| |
|
|
479 |
</xs:complexType> |
| |
|
|
480 |
</xs:element> |
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 11 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 12 |
xmlns:cesc_shared="http://tcga.nci/bcr/xml/clinical/thca/shared/2.5" |
|
|
|
| 13 |
xmlns:follow_up_v2.0="http://tcga.nci/bcr/xml/clinical/thca/followup/2.5/2.0" |
|
|
|
| 14 |
xmlns="http://tcga.nci/bcr/xml/clinical/thca/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/thca/2.4" |
| 15 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/thca/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/thca/2.4" |
| |
| 31 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/thca/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/thca/shared/2.5/TCGA_BCR.THCA_Clinical_Shared_Datatypes.xsd" /> |
|
|
|
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/thca/followup/2.5/2.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/thca/followup/2.5/TCGA_BCR.THCA_Clinical_FollowUp_v2.0.xsd" /> |
|
|
|
| |
| 54 |
<xs:element ref="shared:tissue_source_site" /> |
<> |
48 |
<xs:choice> |
| |
|
|
49 |
<xs:sequence> |
| 55 |
<xs:element ref="shared:patient_id" /> |
|
50 |
<xs:element ref="shared:day_of_form_completion" /> |
| 56 |
<xs:element ref="shared:bcr_patient_barcode" /> |
|
|
|
| 57 |
<xs:element ref="shared:bcr_patient_uuid" /> |
|
51 |
<xs:element ref="shared:month_of_form_completion" /> |
| 58 |
<xs:element ref="shared:informed_consent_verified" /> |
|
52 |
<xs:element ref="shared:year_of_form_completion" /> |
| 59 |
<xs:element ref="shared:icd_o_3_site" /> |
|
53 |
</xs:sequence> |
| 60 |
<xs:element ref="shared:icd_o_3_histology" /> |
|
54 |
<xs:element ref="shared:days_to_form_completion" /> |
| 61 |
<xs:element ref="shared:icd_10" /> |
|
55 |
</xs:choice> |
| |
| 105 |
<xs:element ref="histological_type" /> |
<> |
100 |
<xs:element ref="neoplasm_histologic_type_name" /> |
| 106 |
<xs:element ref="shared:tumor_other_histologic_subtype_descriptive_text" /> |
|
101 |
<xs:element ref="tumor_other_histologic_subtype_descriptive_text" /> |
| |
| 109 |
<xs:element ref="neoplasm_dimension" /> |
<> |
104 |
<xs:element ref="neoplasm_excision_timepoint_pathologic_three_dimensional_size_text" /> |
| |
| 125 |
<xs:element ref="shared:primary_lymph_node_presentation_assessment" /> |
<> |
120 |
<xs:element ref="primary_lymph_node_presentation_assessment_ind" /> |
| 126 |
<xs:element ref="shared:lymph_node_examined_count" /> |
|
121 |
<xs:element ref="lymph_node_examined_count" /> |
| 127 |
<xs:element ref="shared:number_of_lymphnodes_positive_by_he" /> |
|
122 |
<xs:element ref="positive_finding_lymph_node_hematoxylin_and_eosin_staining_microscopy_count" /> |
| |
| 129 |
<xs:element ref="shared:residual_tumor" /> |
<> |
124 |
<xs:element ref="surgical_margin_resection_status" /> |
| 130 |
<xs:element ref="shared:ajcc_cancer_staging_handbook_edition" /> |
|
125 |
<xs:element ref="american_joint_committee_on_cancer_publication_version_type" /> |
| 131 |
<xs:element ref="shared:ajcc_tumor_stage_code" /> |
|
126 |
<xs:element ref="american_joint_committee_on_cancer_tumor_stage_code" /> |
| 132 |
<xs:element ref="shared:ajcc_neoplasm_disease_lymph_node_stage" /> |
|
127 |
<xs:element ref="neoplasm_disease_lymph_node_stage_american_joint_committee_on_cancer_code" /> |
| 133 |
<xs:element ref="shared:ajcc_cancer_metastasis_stage_code" /> |
|
128 |
<xs:element ref="american_joint_committee_on_cancer_metastasis_stage_code" /> |
| 134 |
<xs:element ref="shared:ajcc_neoplasm_disease_stage" /> |
|
129 |
<xs:element ref="neoplasm_disease_stage_american_joint_committee_on_cancer_code" /> |
| |
| 137 |
<xs:element ref="malignant_neoplasm_metastatic_involvement_site" /> |
<> |
132 |
<xs:element ref="metastatic_neoplasm_confirmed_diagnosis_anatomic_site_name" /> |
| 138 |
<xs:element ref="other_metastatic_involvement_anatomic_site" /> |
|
133 |
<xs:element ref="malignant_neoplasm_metastatic_involvement_anatomic_site_text" /> |
| |
| 146 |
<xs:choice> |
+- |
|
|
| 147 |
<xs:sequence> |
|
|
|
| 148 |
<xs:element ref="shared:day_of_form_completion" /> |
|
|
|
| 149 |
<xs:element ref="shared:month_of_form_completion" /> |
|
|
|
| 150 |
<xs:element ref="shared:year_of_form_completion" /> |
|
|
|
| 151 |
</xs:sequence> |
|
|
|
| 152 |
<xs:element ref="shared:days_to_form_completion" /> |
|
|
|
| 153 |
</xs:choice> |
|
|
|
| |
| 155 |
<xs:element ref="follow_ups" /> |
<> |
142 |
<xs:element ref="shared:bcr_patient_barcode" /> |
| 156 |
<xs:element ref="rx:drugs" /> |
|
143 |
<xs:element ref="shared:tissue_source_site" /> |
| 157 |
<xs:element ref="rad:radiations" /> |
|
144 |
<xs:element ref="shared:patient_id" /> |
| 158 |
<xs:element ref="clinical_cqcf" /> |
|
145 |
<xs:element ref="shared:bcr_patient_uuid" /> |
| 159 |
</xs:sequence> |
|
|
|
| 160 |
</xs:complexType> |
|
|
|
| 161 |
</xs:element> |
|
|
|
| |
| 163 |
<xs:element name="follow_ups"> |
<> |
146 |
<xs:element ref="shared:informed_consent_verified" /> |
| 164 |
<xs:annotation> |
|
|
|
| 165 |
<xs:documentation xml:lang="en">We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
|
|
| 166 |
</xs:annotation> |
|
|
|
| 167 |
<xs:complexType> |
|
|
|
| 168 |
<xs:sequence> |
|
|
|
| 169 |
<xs:element ref="follow_up_v2.0:follow_up_v2.0" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| 170 |
</xs:sequence> |
|
|
|
| 171 |
</xs:complexType> |
|
|
|
| 172 |
</xs:element> |
|
|
|
| |
| 174 |
<xs:element name="clinical_cqcf"> |
<> |
147 |
<xs:element ref="shared:icd_o_3_site" /> |
| 175 |
<xs:complexType> |
|
|
|
| 176 |
<xs:sequence> |
|
|
|
| 177 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
|
148 |
<xs:element ref="shared:icd_o_3_histology" /> |
| 178 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
149 |
<xs:element ref="shared:icd_10" /> |
| |
| 180 |
<xs:choice> |
+- |
|
|
| 181 |
<xs:choice> |
|
|
|
| 182 |
<xs:sequence> |
|
|
|
| 183 |
<xs:element ref="cqcf:day_of_consent"/> |
|
|
|
| 184 |
<xs:element ref="cqcf:month_of_consent"/> |
|
|
|
| 185 |
<xs:element ref="cqcf:year_of_consent"/> |
|
|
|
| 186 |
</xs:sequence> |
|
|
|
| |
| 188 |
<xs:element ref="cqcf:days_to_consent"/> |
+- |
|
|
| 189 |
</xs:choice> |
|
|
|
| |
| 191 |
<xs:choice> |
<> |
152 |
<!--xs:element ref="follow_up_case_report_form_submission_reason" /> |
| 192 |
<xs:sequence> |
|
|
|
| 193 |
<xs:element ref="shared:day_of_death"/> |
|
153 |
<xs:element ref="shared:radiation_therapy" /> |
| 194 |
<xs:element ref="shared:month_of_death"/> |
|
154 |
<xs:element ref="shared:additional_pharmaceutical_therapy" /> |
| |
| 195 |
<xs:element ref="shared:year_of_death"/> |
<> |
160 |
<xs:element ref="radiation_therapy_administered_dose_text" /> |
| 196 |
</xs:sequence> |
|
161 |
<xs:element ref="radiosensitizing_agent_administered_indicator" /> |
| |
| 198 |
<xs:element ref="shared:days_to_death"/> |
<> |
|
|
| 199 |
</xs:choice> |
|
165 |
<xs:choice> |
| |
| 200 |
</xs:choice> |
<> |
172 |
</xs:choice> |
| |
| 202 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
<> |
174 |
<xs:element ref="new_neoplasm_confirmed_diagnosis_method_name" /> |
| 203 |
<xs:element ref="shared:prior_diagnosis"/> |
|
175 |
<xs:element ref="histologic_disease_progression_present_indicator" /> |
| |
| 204 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
<> |
179 |
<xs:element ref="new_neoplasm_event_occurrence_anatomic_site" /> |
| 205 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
|
180 |
<xs:element ref="new_neoplasm_occurrence_anatomic_site_text" /> |
| |
| 206 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
<> |
195 |
<xs:element ref="shared:additional_radiation_therapy" /> |
| 207 |
<xs:element ref="cqcf:tumor_focality"/> |
|
196 |
<xs:element ref="shared:additional_radiation_therapy" /--> |
| |
| 208 |
<xs:element ref="cqcf:tumor_type"/> |
<> |
198 |
<xs:element ref="rx:drugs" /> |
| 209 |
<xs:element ref="cqcf:other_diagnosis"/> |
|
199 |
<xs:element ref="rad:radiations" /> |
| 210 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
|
|
| 211 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
|
|
|
| 212 |
<xs:element ref="cqcf:country"/> |
|
|
|
| |
| 318 |
<xs:element name="histological_type" nillable="true"> |
<> |
305 |
<xs:element name="neoplasm_histologic_type_name" nillable="true"> |
| |
| |
|
-+ |
318 |
</xs:simpleContent> |
| |
|
|
319 |
</xs:complexType> |
| |
|
|
320 |
</xs:element> |
| |
| |
|
-+ |
322 |
<xs:element name="tumor_other_histologic_subtype_descriptive_text" nillable="true"> |
| |
|
|
323 |
<xs:complexType> |
| |
|
|
324 |
<xs:simpleContent> |
| |
|
|
325 |
<xs:extension base="xs:string"> |
| |
|
|
326 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
327 |
<xs:attribute name="cde" type="xs:string" default="3124492" /> |
| |
|
|
328 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
329 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
330 |
</xs:extension> |
| |
| 367 |
<xs:element name="neoplasm_dimension" nillable="true"> |
+- |
|
|
| 368 |
<xs:complexType> |
|
|
|
| 369 |
<xs:sequence > |
|
|
|
| 370 |
<xs:element ref="neoplasm_length" minOccurs="1" maxOccurs="1" /> |
|
|
|
| 371 |
<xs:element ref="neoplasm_width" minOccurs="1" maxOccurs="1" /> |
|
|
|
| 372 |
<xs:element ref="neoplasm_depth" minOccurs="1" maxOccurs="1" /> |
|
|
|
| 373 |
</xs:sequence> |
|
|
|
| 374 |
</xs:complexType> |
|
|
|
| 375 |
</xs:element> |
|
|
|
| |
| 377 |
<xs:element name="neoplasm_length" nillable="true"> |
<> |
367 |
<xs:element name="neoplasm_excision_timepoint_pathologic_three_dimensional_size_text" nillable="true"> |
| |
| 380 |
<xs:extension base="utility:number_or_null"> |
<> |
370 |
<xs:extension base="xs:string"> |
| |
| 382 |
<xs:attribute name="cde" type="xs:string" default="2764966" /> |
<> |
372 |
<xs:attribute name="cde" type="xs:string" default="3167398" /> |
| 383 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
373 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| 384 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 385 |
</xs:extension> |
|
|
|
| 386 |
</xs:simpleContent> |
|
|
|
| 387 |
</xs:complexType> |
|
|
|
| 388 |
</xs:element> |
|
|
|
| 389 |
<xs:element name="neoplasm_width" nillable="true"> |
|
|
|
| 390 |
<xs:complexType> |
|
|
|
| 391 |
<xs:simpleContent> |
|
|
|
| 392 |
<xs:extension base="utility:number_or_null"> |
|
|
|
| 393 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 394 |
<xs:attribute name="cde" type="xs:string" default="2764966" /> |
|
|
|
| 395 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| 396 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
|
|
|
| 397 |
</xs:extension> |
|
|
|
| 398 |
</xs:simpleContent> |
|
|
|
| 399 |
</xs:complexType> |
|
|
|
| 400 |
</xs:element> |
|
|
|
| 401 |
<xs:element name="neoplasm_depth" nillable="true"> |
|
|
|
| 402 |
<xs:complexType> |
|
|
|
| 403 |
<xs:simpleContent> |
|
|
|
| 404 |
<xs:extension base="utility:number_or_null"> |
|
|
|
| 405 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
|
|
|
| 406 |
<xs:attribute name="cde" type="xs:string" default="2764966" /> |
|
|
|
| 407 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
|
|
| |
| |
|
-+ |
419 |
<xs:element name="primary_lymph_node_presentation_assessment_ind" nillable="true"> |
| |
|
|
420 |
<xs:complexType> |
| |
|
|
421 |
<xs:simpleContent> |
| |
|
|
422 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
423 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
424 |
<xs:attribute name="cde" type="xs:string" default="2200396" /> |
| |
|
|
425 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
426 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
427 |
</xs:extension> |
| |
|
|
428 |
</xs:simpleContent> |
| |
|
|
429 |
</xs:complexType> |
| |
|
|
430 |
</xs:element> |
| |
| |
|
-+ |
432 |
<xs:element name="lymph_node_examined_count" nillable="true"> |
| |
|
|
433 |
<xs:complexType> |
| |
|
|
434 |
<xs:simpleContent> |
| |
|
|
435 |
<xs:extension base="xs:integer"> |
| |
|
|
436 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
437 |
<xs:attribute name="cde" type="xs:string" default="3" /> |
| |
|
|
438 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
439 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
440 |
</xs:extension> |
| |
|
|
441 |
</xs:simpleContent> |
| |
|
|
442 |
</xs:complexType> |
| |
|
|
443 |
</xs:element> |
| |
| |
|
-+ |
445 |
<xs:element name="positive_finding_lymph_node_hematoxylin_and_eosin_staining_microscopy_count" nillable="true"> |
| |
|
|
446 |
<xs:complexType> |
| |
|
|
447 |
<xs:simpleContent> |
| |
|
|
448 |
<xs:extension base="xs:integer"> |
| |
|
|
449 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
450 |
<xs:attribute name="cde" type="xs:string" default="3086388" /> |
| |
|
|
451 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.2" /> |
| |
|
|
452 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
453 |
</xs:extension> |
| |
|
|
454 |
</xs:simpleContent> |
| |
|
|
455 |
</xs:complexType> |
| |
|
|
456 |
</xs:element> |
| |
| |
|
-+ |
468 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
469 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
470 |
</xs:restriction> |
| |
|
|
471 |
</xs:simpleContent> |
| |
|
|
472 |
</xs:complexType> |
| |
|
|
473 |
</xs:element> |
| |
| |
|
-+ |
475 |
<xs:element name="surgical_margin_resection_status" nillable="true"> |
| |
|
|
476 |
<xs:complexType mixed="true"> |
| |
|
|
477 |
<xs:simpleContent> |
| |
|
|
478 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
479 |
<xs:enumeration value="" /> |
| |
|
|
480 |
<xs:enumeration value="RX" /> |
| |
|
|
481 |
<xs:enumeration value="R0" /> |
| |
|
|
482 |
<xs:enumeration value="R1" /> |
| |
|
|
483 |
<xs:enumeration value="R2" /> |
| |
|
|
484 |
<xs:attribute name="cde" type="xs:string" default="2608702" /> |
| |
|
|
485 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
486 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
487 |
</xs:restriction> |
| |
|
|
488 |
</xs:simpleContent> |
| |
|
|
489 |
</xs:complexType> |
| |
|
|
490 |
</xs:element> |
| |
| |
|
-+ |
492 |
<xs:element name="american_joint_committee_on_cancer_publication_version_type" nillable="true"> |
| |
|
|
493 |
<xs:complexType mixed="true"> |
| |
|
|
494 |
<xs:simpleContent> |
| |
|
|
495 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
496 |
<xs:enumeration value="" /> |
| |
|
|
497 |
<xs:enumeration value="1st" /> |
| |
|
|
498 |
<xs:enumeration value="2nd" /> |
| |
|
|
499 |
<xs:enumeration value="3rd" /> |
| |
|
|
500 |
<xs:enumeration value="4th" /> |
| |
|
|
501 |
<xs:enumeration value="5th" /> |
| |
|
|
502 |
<xs:enumeration value="6th" /> |
| |
|
|
503 |
<xs:enumeration value="7th" /> |
| |
|
|
504 |
<xs:attribute name="cde" type="xs:string" default="2722309" /> |
| |
|
|
505 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
506 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
507 |
</xs:restriction> |
| |
|
|
508 |
</xs:simpleContent> |
| |
|
|
509 |
</xs:complexType> |
| |
|
|
510 |
</xs:element> |
| |
| |
|
-+ |
512 |
<xs:element name="american_joint_committee_on_cancer_tumor_stage_code" nillable="true"> |
| |
|
|
513 |
<xs:complexType mixed="true"> |
| |
|
|
514 |
<xs:simpleContent> |
| |
|
|
515 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
516 |
<xs:enumeration value="" /> |
| |
|
|
517 |
<xs:enumeration value="TX" /> |
| |
|
|
518 |
<xs:enumeration value="T0" /> |
| |
|
|
519 |
<xs:enumeration value="T1" /> |
| |
|
|
520 |
<xs:enumeration value="T1a" /> |
| |
|
|
521 |
<xs:enumeration value="T1b" /> |
| |
|
|
522 |
<xs:enumeration value="T1c" /> |
| |
|
|
523 |
<xs:enumeration value="T2" /> |
| |
|
|
524 |
<xs:enumeration value="T2a" /> |
| |
|
|
525 |
<xs:enumeration value="T2b" /> |
| |
|
|
526 |
<xs:enumeration value="T3" /> |
| |
|
|
527 |
<xs:enumeration value="T3a" /> |
| |
|
|
528 |
<xs:enumeration value="T3b" /> |
| |
|
|
529 |
<xs:enumeration value="T4" /> |
| |
|
|
530 |
<xs:enumeration value="T4a" /> |
| |
|
|
531 |
<xs:enumeration value="T4b" /> |
| |
|
|
532 |
<xs:attribute name="cde" type="xs:string" default="3045435" /> |
| |
|
|
533 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
534 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
535 |
</xs:restriction> |
| |
|
|
536 |
</xs:simpleContent> |
| |
|
|
537 |
</xs:complexType> |
| |
|
|
538 |
</xs:element> |
| |
| |
|
-+ |
540 |
<xs:element name="neoplasm_disease_lymph_node_stage_american_joint_committee_on_cancer_code" nillable="true"> |
| |
|
|
541 |
<xs:complexType mixed="true"> |
| |
|
|
542 |
<xs:simpleContent> |
| |
|
|
543 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
544 |
<xs:enumeration value="" /> |
| |
|
|
545 |
<xs:enumeration value="NX" /> |
| |
|
|
546 |
<xs:enumeration value="N0" /> |
| |
|
|
547 |
<xs:enumeration value="N1" /> |
| |
|
|
548 |
<xs:enumeration value="N1a" /> |
| |
|
|
549 |
<xs:enumeration value="N1b" /> |
| |
|
|
550 |
<xs:enumeration value="N1c" /> |
| |
|
|
551 |
<xs:enumeration value="N2" /> |
| |
|
|
552 |
<xs:attribute name="cde" type="xs:string" default="3203106" /> |
| |
|
|
553 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
554 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
555 |
</xs:restriction> |
| |
|
|
556 |
</xs:simpleContent> |
| |
|
|
557 |
</xs:complexType> |
| |
|
|
558 |
</xs:element> |
| |
| |
|
-+ |
560 |
<xs:element name="american_joint_committee_on_cancer_metastasis_stage_code" nillable="true"> |
| |
|
|
561 |
<xs:complexType mixed="true"> |
| |
|
|
562 |
<xs:simpleContent> |
| |
|
|
563 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
564 |
<xs:enumeration value="" /> |
| |
|
|
565 |
<xs:enumeration value="MX" /> |
| |
|
|
566 |
<xs:enumeration value="M0" /> |
| |
|
|
567 |
<xs:enumeration value="M1" /> |
| |
|
|
568 |
<xs:attribute name="cde" type="xs:string" default="3045439" /> |
| |
|
|
569 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
570 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
571 |
</xs:restriction> |
| |
|
|
572 |
</xs:simpleContent> |
| |
|
|
573 |
</xs:complexType> |
| |
|
|
574 |
</xs:element> |
| |
| |
|
-+ |
576 |
<xs:element name="neoplasm_disease_stage_american_joint_committee_on_cancer_code" nillable="true"> |
| |
|
|
577 |
<xs:complexType mixed="true"> |
| |
|
|
578 |
<xs:simpleContent> |
| |
|
|
579 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
580 |
<xs:enumeration value="" /> |
| |
|
|
581 |
<xs:enumeration value="Stage I" /> |
| |
|
|
582 |
<xs:enumeration value="Stage II" /> |
| |
|
|
583 |
<xs:enumeration value="Stage III" /> |
| |
|
|
584 |
<xs:enumeration value="Stage IV" /> |
| |
|
|
585 |
<xs:enumeration value="Stage IVA" /> |
| |
|
|
586 |
<xs:enumeration value="Stage IVB" /> |
| |
|
|
587 |
<xs:enumeration value="Stage IVC" /> |
| |
|
|
588 |
<xs:attribute name="cde" type="xs:string" default="3203222" /> |
| |
| 508 |
<xs:element name="malignant_neoplasm_metastatic_involvement_site" nillable="true"> |
<> |
634 |
<xs:element name="metastatic_neoplasm_confirmed_diagnosis_anatomic_site_name" nillable="true"> |
| |
| 516 |
<xs:attribute name="cde" type="xs:string" default="62835" /> |
<> |
642 |
<xs:attribute name="cde" type="xs:string" default="2967298" /> |
| 517 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
643 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
| 524 |
<xs:element name="other_metastatic_involvement_anatomic_site" nillable="true"> |
<> |
650 |
<xs:element name="malignant_neoplasm_metastatic_involvement_anatomic_site_text" nillable="true"> |
| |
| 529 |
<xs:attribute name="cde" type="xs:string" default="3135371" /> |
<> |
655 |
<xs:attribute name="cde" type="xs:string" default="3178387" /> |
| 530 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.5" /> |
|
656 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| 4 |
<xs:schema elementFormDefault="qualified" version="2.5.0" |
<> |
4 |
<xs:schema elementFormDefault="qualified" version="2.4.4" |
| |
| 6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.5" |
<> |
6 |
xmlns:utility="http://tcga.nci/bcr/xml/utility/2.4" |
| 7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.5" |
|
7 |
xmlns:admin="http://tcga.nci/bcr/xml/administration/2.4" |
| 8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.5" |
|
8 |
xmlns:shared="http://tcga.nci/bcr/xml/clinical/shared/2.4" |
| 9 |
xmlns:ucec_shared="http://tcga.nci/bcr/xml/clinical/ucec/shared/2.5" |
|
|
|
| 10 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.5" |
|
9 |
xmlns:rad="http://tcga.nci/bcr/xml/clinical/radiation/2.4" |
| 11 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" |
|
10 |
xmlns:rx="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" |
| 12 |
xmlns:cqcf="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" |
|
|
|
| 13 |
xmlns:follow_up_v1.7="http://tcga.nci/bcr/xml/clinical/ucec/followup/2.5/1.7" |
|
|
|
| 14 |
xmlns:follow_up_v2.0="http://tcga.nci/bcr/xml/clinical/ucec/followup/2.5/2.0" |
|
|
|
| 15 |
xmlns="http://tcga.nci/bcr/xml/clinical/ucec/2.5" |
|
11 |
xmlns="http://tcga.nci/bcr/xml/clinical/ucec/2.4" |
| 16 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/ucec/2.5" |
|
12 |
targetNamespace="http://tcga.nci/bcr/xml/clinical/ucec/2.4" |
| |
| 32 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.5/TCGA_BCR.Utility.xsd" /> |
<> |
28 |
<xs:import namespace="http://tcga.nci/bcr/xml/utility/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/utility/2.4/TCGA_BCR.Utility.xsd" /> |
| 33 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.5/TCGA_BCR.Administration.xsd" /> |
|
29 |
<xs:import namespace="http://tcga.nci/bcr/xml/administration/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/administration/2.4/TCGA_BCR.Administration.xsd" /> |
| 34 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.5/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
|
30 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/shared/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/shared/2.4/TCGA_BCR.Shared_Clinical_Elements.xsd" /> |
| 35 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.5/TCGA_BCR.Radiation.xsd" /> |
|
31 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/radiation/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/radiation/2.4/TCGA_BCR.Radiation.xsd" /> |
| 36 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.5/TCGA_BCR.Pharmaceutical.xsd" /> |
|
32 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/pharmaceutical/2.4" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/pharmaceutical/2.4/TCGA_BCR.Pharmaceutical.xsd" /> |
| 37 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/cqcf/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/cqcf/2.5/TCGA_BCR.CQCF.xsd" /> |
|
|
|
| 38 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/ucec/shared/2.5" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/ucec/shared/2.5/TCGA_BCR.UCEC_Clinical_Shared_Datatypes.xsd" /> |
|
|
|
| 39 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/ucec/followup/2.5/1.7" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/ucec/followup/2.5/TCGA_BCR.UCEC_Clinical_FollowUp_v1.7.xsd" /> |
|
|
|
| 40 |
<xs:import namespace="http://tcga.nci/bcr/xml/clinical/ucec/followup/2.5/2.0" schemaLocation="http://tcga-data.nci.nih.gov/docs/xsd/BCR/tcga.nci/bcr/xml/clinical/ucec/followup/2.5/TCGA_BCR.UCEC_Clinical_FollowUp_v2.0.xsd" /> |
|
|
|
| |
| 49 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.5"/> |
<> |
41 |
<xs:attribute name="schemaVersion" type="xs:decimal" use="required" fixed="2.4"/> |
| |
| 56 |
<xs:element ref="shared:tissue_source_site" /> |
<> |
48 |
<xs:element ref="shared:tumor_tissue_site" /> |
| 57 |
<xs:element ref="shared:patient_id" /> |
|
|
|
| 58 |
<xs:element ref="shared:bcr_patient_barcode" /> |
|
49 |
<xs:element ref="primary_other_site_of_disease_name" /> |
| 59 |
<xs:element ref="shared:bcr_patient_uuid" /> |
|
50 |
<xs:element ref="histological_type" /> |
| 60 |
<xs:element ref="shared:informed_consent_verified" /> |
|
51 |
<xs:element ref="shared:prior_diagnosis" /> |
| 61 |
<xs:element ref="shared:icd_o_3_site" /> |
|
52 |
<xs:element ref="shared:gender" /> |
| 62 |
<xs:element ref="shared:icd_o_3_histology" /> |
|
|
|
| 63 |
<xs:element ref="shared:icd_10" /> |
|
53 |
<xs:element ref="shared:vital_status" /> |
| |
| 65 |
<xs:element ref="tissue_prospective_collection_indicator" /> |
+- |
|
|
| 66 |
<xs:element ref="tissue_retrospective_collection_indicator" /> |
|
|
|
| |
| 75 |
<xs:element ref="shared:gender" /> |
<> |
64 |
|
| 76 |
<xs:element ref="menopause_status" /> |
|
|
|
| 77 |
<xs:element ref="shared:height" /> |
|
|
|
| 78 |
<xs:element ref="shared:weight" /> |
|
|
|
| 79 |
<xs:element ref="shared:race" /> |
|
|
|
| 80 |
<xs:element ref="shared:ethnicity" /> |
|
|
|
| 81 |
<xs:element ref="shared:prior_diagnosis" /> |
|
|
|
| 82 |
<xs:element ref="shared:pretreatment_history" /> |
|
|
|
| 83 |
<xs:element ref="shared:vital_status"> |
|
|
|
| 84 |
<xs:annotation> |
|
|
|
| 85 |
<xs:documentation xml:lang="en">The vital_status question is asked in both the initial enrollment form and the follow-up form(s).</xs:documentation> |
|
|
|
| 86 |
</xs:annotation> |
|
|
|
| 87 |
</xs:element> |
|
|
|
| |
| 89 |
<xs:annotation> |
+- |
|
|
| 90 |
<xs:documentation xml:lang="en">The date_of_last_followup question is asked in both the initial enrollment form and the follow-up form(s).</xs:documentation> |
|
|
|
| 91 |
</xs:annotation> |
|
|
|
| 92 |
<xs:sequence> |
|
|
|
| 93 |
<xs:element ref="shared:day_of_last_followup" /> |
|
|
|
| 94 |
<xs:element ref="shared:month_of_last_followup" /> |
|
|
|
| 95 |
<xs:element ref="shared:year_of_last_followup" /> |
|
|
|
| 96 |
</xs:sequence> |
|
|
|
| 97 |
<xs:element ref="shared:days_to_last_followup" /> |
|
|
|
| 98 |
</xs:choice> |
|
|
|
| 99 |
<xs:choice> |
|
|
|
| 100 |
<xs:annotation> |
|
|
|
| 101 |
<xs:documentation xml:lang="en"> |
|
|
|
| 102 |
The date_of_last_known_alive question is asked in both the initial enrollment form and the follow-up form(s). |
|
|
|
| |
| 104 |
DEPRECATED: |
+- |
|
|
| 105 |
This question is no longer asked on the TCGA Clinical Data initial enrollment form or follow-up Forms (starting with v2.0) |
|
|
|
| 106 |
within the UCEC study. |
|
|
|
| 107 |
</xs:documentation> |
|
|
|
| 108 |
</xs:annotation> |
|
|
|
| |
| 118 |
<xs:annotation> |
+- |
|
|
| 119 |
<xs:documentation xml:lang="en">The date_of_death question is asked in both the initial enrollment form and the follow-up form(s).</xs:documentation> |
|
|
|
| 120 |
</xs:annotation> |
|
|
|
| |
| |
|
<> |
85 |
<xs:choice> |
| |
|
|
86 |
<xs:sequence> |
| |
|
|
87 |
<xs:element ref="shared:day_of_last_followup" /> |
| |
|
|
88 |
<xs:element ref="shared:month_of_last_followup" /> |
| 128 |
<xs:element ref="shared:person_neoplasm_cancer_status"> |
|
89 |
<xs:element ref="shared:year_of_last_followup" /> |
| 129 |
<xs:annotation> |
|
90 |
</xs:sequence> |
| 130 |
<xs:documentation xml:lang="en">The person_neoplasm_cancer_status question is asked in both the initial enrollment form and the follow-up form(s).</xs:documentation> |
|
91 |
|
| |
|
|
92 |
<xs:element ref="shared:days_to_last_followup" /> |
| 131 |
</xs:annotation> |
|
93 |
</xs:choice> |
| |
| 132 |
</xs:element> |
<> |
95 |
<xs:element ref="shared:race" /> |
| 133 |
|
|
96 |
<xs:element ref="shared:bcr_patient_barcode" /> |
| 134 |
<xs:element ref="shared:tumor_tissue_site" /> |
|
97 |
<xs:element ref="shared:tissue_source_site" /> |
| 135 |
<xs:element ref="primary_other_site_of_disease_name"> |
|
98 |
<xs:element ref="shared:patient_id" /> |
| 136 |
<xs:annotation><xs:documentation> |
|
99 |
<xs:element ref="shared:bcr_patient_uuid" /> |
| 137 |
Data for the primary_other_site_of_disease_name element is *only* asked on the |
|
100 |
<xs:element ref="shared:pretreatment_history" /> |
| 138 |
TCGA Clinical Data Form during initial enrollment within the UCEC study, *and only* when |
|
101 |
<xs:element ref="shared:radiation_therapy" /> |
| 139 |
an answer of 'Other (please specify)' is provided for tumor_tissue_site. |
|
102 |
<xs:element ref="shared:informed_consent_verified" /> |
| 140 |
</xs:documentation></xs:annotation> |
|
103 |
<xs:element ref="shared:icd_o_3_site" /> |
| 141 |
</xs:element> |
|
|
|
| 142 |
<xs:element ref="histological_type" /> |
|
104 |
<xs:element ref="shared:icd_o_3_histology" /> |
| |
|
|
105 |
<xs:element ref="shared:icd_10" /> |
| |
| |
|
<> |
121 |
<xs:choice> |
| |
|
|
122 |
<xs:sequence> |
| 154 |
<xs:element ref="shared:initial_pathologic_diagnosis_method" /> |
|
123 |
<xs:element ref="shared:day_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
124 |
<xs:element ref="shared:month_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
125 |
<xs:element ref="shared:year_of_new_tumor_event_after_initial_treatment" /> |
| |
|
|
126 |
</xs:sequence> |
| |
| 155 |
<xs:element ref="first_pathologic_diagnosis_biospecimen_acquisition_other_method_text"> |
<> |
128 |
<xs:element ref="shared:days_to_new_tumor_event_after_initial_treatment" /> |
| |
|
|
129 |
</xs:choice> |
| |
| |
|
<> |
131 |
<xs:element ref="gynecologic_figo_staging_system" /> |
| 156 |
<xs:annotation><xs:documentation xml:lang="en"> |
|
132 |
<xs:element ref="endometrial_carcinoma_figo_stage" /> |
| |
|
|
133 |
<xs:element ref="tumor_grade" /> |
| |
|
|
134 |
<xs:element ref="primary_therapy_outcome_success" /> |
| |
|
|
135 |
<xs:element ref="shared:ethnicity" /> |
| |
|
|
136 |
<xs:element ref="shared:additional_radiation_therapy" /> |
| |
|
|
137 |
<xs:element ref="shared:additional_pharmaceutical_therapy" /> |
| |
|
|
138 |
<xs:element ref="shared:additional_surgery_locoregional_procedure" /> |
| |
| |
|
<> |
140 |
<xs:choice> |
| |
|
|
141 |
<xs:sequence> |
| |
|
|
142 |
<xs:element ref="shared:day_of_additional_surgery_metastatic_procedure" /> |
| 157 |
Data for the first_pathologic_diagnosis_biospecimen_acquisition_other_method_text element is *only* asked on the |
|
143 |
<xs:element ref="shared:month_of_additional_surgery_metastatic_procedure" /> |
| 158 |
TCGA Clinical Data Form during initial enrollment within the UCEC study, *and only* when |
|
|
|
| 159 |
an answer of 'Other method (please specify)' is provided for first_pathologic_diagnosis_biospecimen_acquisition_method_type. |
|
144 |
<xs:element ref="shared:year_of_additional_surgery_metastatic_procedure" /> |
| 160 |
</xs:documentation></xs:annotation> |
|
|
|
| 161 |
</xs:element> |
|
145 |
</xs:sequence> |
| |
| |
|
-+ |
147 |
<xs:element ref="shared:days_to_additional_surgery_metastatic_procedure" /> |
| |
|
|
148 |
</xs:choice> |
| |
| 162 |
<xs:element ref="surgical_approach" /> |
<> |
150 |
<xs:element ref="shared:person_neoplasm_cancer_status" /> |
| |
|
|
151 |
<xs:element ref="shared:height" /> |
| 163 |
<xs:element ref="peritoneal_wash" /> |
|
152 |
<xs:element ref="shared:weight" /> |
| |
|
|
153 |
<xs:element ref="first_pathologic_diagnosis_biospecimen_acquisition_method_type" /> |
| |
|
|
154 |
<xs:element ref="first_pathologic_diagnosis_biospecimen_acquisition_other_method_text" /> |
| |
| |
|
<> |
156 |
<xs:element ref="peritoneal_wash" /> |
| 165 |
<xs:element ref="gynecologic_figo_staging_system"> |
|
157 |
<xs:element ref="prosp_tissue_coll" /> |
| 166 |
<xs:annotation><xs:documentation xml:lang="en"> |
|
|
|
| 167 |
Data for the gynecologic_figo_staging_system element is only asked on the |
|
|
|
| 168 |
*version 2.08* and later of the TCGA Clinical Data Form during initial enrollment |
|
|
|
| 169 |
within the UCEC study. |
|
|
|
| 170 |
</xs:documentation></xs:annotation> |
|
|
|
| 171 |
</xs:element> |
|
|
|
| 172 |
<xs:element ref="gynecologic_tumor_grouping_figo_stage" /> |
|
158 |
<xs:element ref="retro_tissue_coll" /> |
| 173 |
<xs:element ref="tumor_grade" /> |
|
159 |
<xs:element ref="surgical_approach" /> |
| 174 |
<xs:element ref="shared:residual_tumor" /> |
|
160 |
<xs:element ref="menopause_status" /> |
| 175 |
<xs:element ref="total_pelv_lnr" /> |
|
161 |
<xs:element ref="aln_pos_ihc" /> |
| 176 |
<xs:element ref="pln_pos_light_micro" /> |
|
162 |
<xs:element ref="aln_pos_light_micro" /> |
| |
| |
|
<> |
164 |
<xs:element ref="pln_pos_light_micro" /> |
| 178 |
<xs:element ref="total_pelv_lnp" /> |
|
165 |
<xs:element ref="total_aor-lnp" /> |
| |
| |
|
<> |
167 |
<xs:element ref="total_pelv_lnp" /> |
| 180 |
<xs:element ref="aln_pos_light_micro" /> |
|
168 |
<xs:element ref="total_pelv_lnr" /> |
| |
|
|
169 |
<xs:element ref="diabetes" /> |
| |
|
|
170 |
<xs:element ref="horm_ther" /> |
| |
|
|
171 |
<xs:element ref="hypertension" /> |
| 181 |
<xs:element ref="aln_pos_ihc" /> |
|
172 |
<xs:element ref="pregnancies" /> |
| 182 |
<xs:element ref="total_aor-lnp" /> |
|
173 |
<xs:element ref="colorectal_cancer" /> |
| |
|
|
174 |
<xs:element ref="addl_trtmt_success" /> |
| |
|
|
175 |
<xs:element ref="adjuvant_postoperative_targeted_therapy_administered_indicator" /> |
| |
|
|
176 |
<xs:element ref="birth_control_pill_history_usage_category" /> |
| |
|
|
177 |
<xs:element ref="prior_tamoxifen_administered_usage_category" /> |
| |
|
|
178 |
<xs:element ref="followup_met_assessment_outcome_success_margin_status" /> |
| |
|
|
179 |
<xs:element ref="recurrence_second_surgery_neoplasm_surgical_procedure_name" /> |
| |
|
|
180 |
<xs:element ref="recurrence_second_surgery_neoplasm_surgical_procedure_name_other" /> |
| |
| 184 |
<xs:annotation> |
+- |
|
|
| 185 |
<xs:documentation xml:lang="en"> |
|
|
|
| 186 |
Date the interviewer originally completed the corresponding TCGA Clinical Data Form. |
|
|
|
| 187 |
If modifications are made after the form is marked complete, this date should not change. |
|
|
|
| 188 |
</xs:documentation> |
|
|
|
| 189 |
</xs:annotation> |
|
|
|
| |
| 198 |
<xs:element ref="follow_ups" /> |
+- |
|
|
| |
| 201 |
<xs:element ref="clinical_cqcf" /> |
+- |
|
|
| |
| 206 |
<xs:element name="follow_ups"> |
+- |
|
|
| 207 |
<xs:annotation> |
|
|
|
| 208 |
<xs:documentation xml:lang="en">We are using namespaces and version numbers to distinguish one version of followup from another.</xs:documentation> |
|
|
|
| 209 |
</xs:annotation> |
|
|
|
| 210 |
<xs:complexType> |
|
|
|
| 211 |
<xs:sequence> |
|
|
|
| 212 |
<xs:element ref="follow_up_v1.7:follow_up_v1.7" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| 213 |
<xs:element ref="follow_up_v2.0:follow_up_v2.0" minOccurs="0" maxOccurs="unbounded" /> |
|
|
|
| 214 |
</xs:sequence> |
|
|
|
| 215 |
</xs:complexType> |
|
|
|
| 216 |
</xs:element> |
|
|
|
| |
| 218 |
<xs:element name="clinical_cqcf"> |
+- |
|
|
| 219 |
<xs:complexType> |
|
|
|
| 220 |
<xs:sequence> |
|
|
|
| 221 |
<xs:element ref="shared:anatomic_organ_subdivision"/> |
|
|
|
| 222 |
<xs:element ref="cqcf:consent_or_death_status"/> |
|
|
|
| |
| 224 |
<xs:choice> |
+- |
|
|
| 225 |
<xs:choice> |
|
|
|
| 226 |
<xs:sequence> |
|
|
|
| 227 |
<xs:element ref="cqcf:day_of_consent"/> |
|
|
|
| 228 |
<xs:element ref="cqcf:month_of_consent"/> |
|
|
|
| 229 |
<xs:element ref="cqcf:year_of_consent"/> |
|
|
|
| 230 |
</xs:sequence> |
|
|
|
| |
| 232 |
<xs:element ref="cqcf:days_to_consent"/> |
+- |
|
|
| 233 |
</xs:choice> |
|
|
|
| |
| 235 |
<xs:choice> |
+- |
|
|
| 236 |
<xs:sequence> |
|
|
|
| 237 |
<xs:element ref="shared:day_of_death"/> |
|
|
|
| 238 |
<xs:element ref="shared:month_of_death"/> |
|
|
|
| 239 |
<xs:element ref="shared:year_of_death"/> |
|
|
|
| 240 |
</xs:sequence> |
|
|
|
| |
| 242 |
<xs:element ref="shared:days_to_death"/> |
+- |
|
|
| 243 |
</xs:choice> |
|
|
|
| 244 |
</xs:choice> |
|
|
|
| |
| 246 |
<xs:element ref="cqcf:diagnosis_subtype"/> |
+- |
|
|
| 247 |
<xs:element ref="shared:prior_diagnosis"/> |
|
|
|
| 248 |
<xs:element ref="cqcf:history_of_neoadjuvant_treatment"/> |
|
|
|
| 249 |
<xs:element ref="cqcf:normal_tissue_anatomic_site"/> |
|
|
|
| 250 |
<xs:element ref="cqcf:normal_tissue_proximity"/> |
|
|
|
| 251 |
<xs:element ref="cqcf:tumor_focality"/> |
|
|
|
| 252 |
<xs:element ref="cqcf:tumor_type"/> |
|
|
|
| 253 |
<xs:element ref="cqcf:other_diagnosis"/> |
|
|
|
| 254 |
<xs:element ref="cqcf:histological_subtype" minOccurs="0"/> |
|
|
|
| 255 |
<xs:element ref="cqcf:other_anatomic_site" minOccurs="0"/> |
|
|
|
| 256 |
<xs:element ref="cqcf:country"/> |
|
|
|
| 257 |
</xs:sequence> |
|
|
|
| 258 |
</xs:complexType> |
|
|
|
| 259 |
</xs:element> |
|
|
|
| |
| 315 |
<xs:element name="gynecologic_tumor_grouping_figo_stage" nillable="true"> |
<> |
252 |
<xs:element name="endometrial_carcinoma_figo_stage" nillable="true"> |
| |
| |
|
-+ |
304 |
<xs:element name="primary_therapy_outcome_success" nillable="true"> |
| |
|
|
305 |
<xs:complexType> |
| |
|
|
306 |
<xs:simpleContent> |
| |
|
|
307 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
308 |
<xs:enumeration value="" /> |
| |
|
|
309 |
<xs:enumeration value="Unknown" /> |
| |
|
|
310 |
<xs:enumeration value="Not Applicable" /> |
| |
|
|
311 |
<xs:enumeration value="Persistent Disease" /> |
| |
|
|
312 |
<xs:enumeration value="Progressive Disease" /> |
| |
|
|
313 |
<xs:enumeration value="Stable Disease" /> |
| |
|
|
314 |
<xs:enumeration value="Partial Response" /> |
| |
|
|
315 |
<xs:enumeration value="Complete Response" /> |
| |
|
|
316 |
<xs:attribute name="cde" type="xs:string" default="2786727" /> |
| |
|
|
317 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
318 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
319 |
</xs:restriction> |
| |
|
|
320 |
</xs:simpleContent> |
| |
|
|
321 |
</xs:complexType> |
| |
|
|
322 |
</xs:element> |
| |
| |
|
-+ |
324 |
<xs:element name="first_pathologic_diagnosis_biospecimen_acquisition_method_type" nillable="true"> |
| |
|
|
325 |
<xs:complexType mixed="true"> |
| |
|
|
326 |
<xs:simpleContent> |
| |
|
|
327 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
328 |
<xs:enumeration value="" /> |
| |
|
|
329 |
<xs:enumeration value="Other method specify:" /> |
| |
|
|
330 |
<xs:enumeration value="Aspirate" /> |
| |
|
|
331 |
<xs:enumeration value="Core needle biopsy" /> |
| |
|
|
332 |
<xs:enumeration value="Cytology (e.g. Peritoneal or pleural fluid)" /> |
| |
|
|
333 |
<xs:enumeration value="Dilation and curettage procedure" /> |
| |
|
|
334 |
<xs:enumeration value="Endoscopic Biopsy" /> |
| |
|
|
335 |
<xs:enumeration value="Excisional Biopsy" /> |
| |
|
|
336 |
<xs:enumeration value="Fine needle aspiration biopsy" /> |
| |
|
|
337 |
<xs:enumeration value="Incisional Biopsy" /> |
| |
|
|
338 |
<xs:enumeration value="Office Endometrial Biopsy" /> |
| |
|
|
339 |
<xs:enumeration value="Tumor resection" /> |
| |
|
|
340 |
<xs:attribute name="cde" type="xs:string" default="2757941" /> |
| |
|
|
341 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
342 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
343 |
</xs:restriction> |
| |
|
|
344 |
</xs:simpleContent> |
| |
|
|
345 |
</xs:complexType> |
| |
|
|
346 |
</xs:element> |
| |
| 370 |
<xs:extension base="utility:number_or_null"> |
<> |
351 |
<xs:extension base="xs:decimal"> |
| |
| 398 |
<xs:element name="tissue_prospective_collection_indicator" nillable="true"> |
<> |
379 |
<xs:element name="prosp_tissue_coll" nillable="true"> |
| |
| 411 |
<xs:element name="tissue_retrospective_collection_indicator" nillable="true"> |
<> |
392 |
<xs:element name="retro_tissue_coll" nillable="true"> |
| |
| 459 |
<xs:extension base="utility:integer_or_null"> |
<> |
440 |
<xs:extension base="xs:integer"> |
| |
| 472 |
<xs:extension base="utility:integer_or_null"> |
<> |
453 |
<xs:extension base="xs:integer"> |
| |
| 485 |
<xs:extension base="utility:integer_or_null"> |
<> |
466 |
<xs:extension base="xs:integer"> |
| |
| 498 |
<xs:extension base="utility:integer_or_null"> |
<> |
479 |
<xs:extension base="xs:integer"> |
| |
| 511 |
<xs:extension base="utility:integer_or_null"> |
<> |
492 |
<xs:extension base="xs:integer"> |
| |
| 524 |
<xs:extension base="utility:integer_or_null"> |
<> |
505 |
<xs:extension base="xs:integer"> |
| |
| 537 |
<xs:extension base="utility:integer_or_null"> |
<> |
518 |
<xs:extension base="xs:integer"> |
| |
| 550 |
<xs:extension base="utility:integer_or_null"> |
<> |
531 |
<xs:extension base="xs:integer"> |
| |
| |
|
-+ |
554 |
<xs:simpleType name="number_or_not_available"> |
| |
|
|
555 |
<xs:union memberTypes="xs:decimal"> |
| |
|
|
556 |
<xs:simpleType> |
| |
|
|
557 |
<xs:restriction base="xs:decimal" /> |
| |
|
|
558 |
</xs:simpleType> |
| |
| |
|
-+ |
560 |
<xs:simpleType> |
| |
|
|
561 |
<xs:restriction base="xs:string"> |
| |
|
|
562 |
<xs:enumeration value="Not available"/> |
| |
|
|
563 |
</xs:restriction> |
| |
|
|
564 |
</xs:simpleType> |
| |
|
|
565 |
</xs:union> |
| |
|
|
566 |
</xs:simpleType> |
| |
| |
|
-+ |
568 |
<xs:element name="diabetes" nillable="true"> |
| |
|
|
569 |
<xs:complexType> |
| |
|
|
570 |
<xs:simpleContent> |
| |
|
|
571 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
572 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
573 |
<xs:attribute name="cde" type="xs:string" default="2716085" /> |
| |
|
|
574 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
575 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
576 |
</xs:extension> |
| |
|
|
577 |
</xs:simpleContent> |
| |
|
|
578 |
</xs:complexType> |
| |
|
|
579 |
</xs:element> |
| |
| |
|
-+ |
581 |
<xs:element name="horm_ther" nillable="true"> |
| |
|
|
582 |
<xs:complexType mixed="true"> |
| |
|
|
583 |
<xs:simpleContent> |
| |
|
|
584 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
585 |
<xs:enumeration value="" /> |
| |
|
|
586 |
<xs:enumeration value="Yes, I am currently taking menopausal hormone therapy." /> |
| |
|
|
587 |
<xs:enumeration value="Yes, I have taken menopausal hormone therapy in the past, but no longer do." /> |
| |
|
|
588 |
<xs:enumeration value="No, I have never taken menopausal hormone therapy." /> |
| |
|
|
589 |
<xs:enumeration value="48 months" /> |
| |
|
|
590 |
<xs:enumeration value="60 months" /> |
| |
|
|
591 |
<xs:attribute name="cde" type="xs:string" default="3012813" /> |
| |
|
|
592 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
593 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
594 |
</xs:restriction> |
| |
|
|
595 |
</xs:simpleContent> |
| |
|
|
596 |
</xs:complexType> |
| |
|
|
597 |
</xs:element> |
| |
| |
|
-+ |
599 |
<xs:element name="hypertension" nillable="true"> |
| |
|
|
600 |
<xs:complexType> |
| |
|
|
601 |
<xs:simpleContent> |
| |
|
|
602 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
603 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
604 |
<xs:attribute name="cde" type="xs:string" default="2183378" /> |
| |
|
|
605 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
606 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
607 |
</xs:extension> |
| |
|
|
608 |
</xs:simpleContent> |
| |
|
|
609 |
</xs:complexType> |
| |
|
|
610 |
</xs:element> |
| |
| |
|
-+ |
612 |
<xs:element name="pregnancies" nillable="true"> |
| |
|
|
613 |
<xs:complexType mixed="true"> |
| |
|
|
614 |
<xs:simpleContent> |
| |
|
|
615 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
616 |
<xs:enumeration value="" /> |
| |
|
|
617 |
<xs:enumeration value="1" /> |
| |
|
|
618 |
<xs:enumeration value="2" /> |
| |
|
|
619 |
<xs:enumeration value="3" /> |
| |
|
|
620 |
<xs:enumeration value="4+" /> |
| |
|
|
621 |
<xs:attribute name="cde" type="xs:string" default="3012512" /> |
| |
|
|
622 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
623 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
624 |
</xs:restriction> |
| |
|
|
625 |
</xs:simpleContent> |
| |
|
|
626 |
</xs:complexType> |
| |
|
|
627 |
</xs:element> |
| |
| |
|
-+ |
629 |
<xs:element name="colorectal_cancer" nillable="true"> |
| |
|
|
630 |
<xs:complexType> |
| |
|
|
631 |
<xs:simpleContent> |
| |
|
|
632 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
633 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
634 |
<xs:attribute name="cde" type="xs:string" default="2684753" /> |
| |
|
|
635 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
636 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
637 |
</xs:extension> |
| |
|
|
638 |
</xs:simpleContent> |
| |
|
|
639 |
</xs:complexType> |
| |
|
|
640 |
</xs:element> |
| |
| |
|
-+ |
642 |
<xs:element name="addl_trtmt_success" nillable="true"> |
| |
|
|
643 |
<xs:complexType mixed="true"> |
| |
|
|
644 |
<xs:simpleContent> |
| |
|
|
645 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
646 |
<xs:enumeration value="" /> |
| |
|
|
647 |
<xs:enumeration value="Progressive Disease" /> |
| |
|
|
648 |
<xs:enumeration value="Stable Disease" /> |
| |
|
|
649 |
<xs:enumeration value="Partial Response" /> |
| |
|
|
650 |
<xs:enumeration value="Complete Response" /> |
| |
|
|
651 |
<xs:attribute name="cde" type="xs:string" default="3033278" /> |
| |
|
|
652 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
653 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
654 |
</xs:restriction> |
| |
|
|
655 |
</xs:simpleContent> |
| |
|
|
656 |
</xs:complexType> |
| |
|
|
657 |
</xs:element> |
| |
| |
|
-+ |
659 |
<xs:element name="adjuvant_postoperative_targeted_therapy_administered_indicator" nillable="true"> |
| |
|
|
660 |
<xs:complexType> |
| |
|
|
661 |
<xs:simpleContent> |
| |
|
|
662 |
<xs:extension base="utility:yes_or_no"> |
| |
|
|
663 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
664 |
<xs:attribute name="cde" type="xs:string" default="2785850" /> |
| |
|
|
665 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
666 |
<xs:attribute name="tier" type="xs:string" default="1" /> |
| |
|
|
667 |
</xs:extension> |
| |
|
|
668 |
</xs:simpleContent> |
| |
|
|
669 |
</xs:complexType> |
| |
|
|
670 |
</xs:element> |
| |
| |
|
-+ |
672 |
<xs:element name="birth_control_pill_history_usage_category" nillable="true"> |
| |
|
|
673 |
<xs:complexType mixed="true"> |
| |
|
|
674 |
<xs:simpleContent> |
| |
|
|
675 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
676 |
<xs:enumeration value="" /> |
| |
|
|
677 |
<xs:enumeration value="Current User" /> |
| |
|
|
678 |
<xs:enumeration value="Former User" /> |
| |
|
|
679 |
<xs:enumeration value="Never Used" /> |
| |
|
|
680 |
<xs:enumeration value="Unknown" /> |
| |
|
|
681 |
<xs:attribute name="cde" type="xs:string" default="3104217" /> |
| |
|
|
682 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
683 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
684 |
</xs:restriction> |
| |
|
|
685 |
</xs:simpleContent> |
| |
|
|
686 |
</xs:complexType> |
| |
|
|
687 |
</xs:element> |
| |
| |
|
-+ |
689 |
<xs:element name="prior_tamoxifen_administered_usage_category" nillable="true"> |
| |
|
|
690 |
<xs:complexType mixed="true"> |
| |
|
|
691 |
<xs:simpleContent> |
| |
|
|
692 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
693 |
<xs:enumeration value="" /> |
| |
|
|
694 |
<xs:enumeration value="Current User (This is an exclusion criterion)" /> |
| |
|
|
695 |
<xs:enumeration value="Former User (This is an exclusion criterion)" /> |
| |
|
|
696 |
<xs:enumeration value="Never Used" /> |
| |
|
|
697 |
<xs:attribute name="cde" type="xs:string" default="3104234" /> |
| |
|
|
698 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
699 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
700 |
</xs:restriction> |
| |
|
|
701 |
</xs:simpleContent> |
| |
|
|
702 |
</xs:complexType> |
| |
|
|
703 |
</xs:element> |
| |
| |
|
-+ |
705 |
<xs:element name="followup_met_assessment_outcome_success_margin_status" nillable="true"> |
| |
|
|
706 |
<xs:complexType mixed="true"> |
| |
|
|
707 |
<xs:simpleContent> |
| |
|
|
708 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
709 |
<xs:enumeration value="" /> |
| |
|
|
710 |
<xs:enumeration value="R0" /> |
| |
|
|
711 |
<xs:enumeration value="R1" /> |
| |
|
|
712 |
<xs:enumeration value="R2" /> |
| |
|
|
713 |
<xs:enumeration value="RX" /> |
| |
|
|
714 |
<xs:attribute name="cde" type="xs:string" default="2608702" /> |
| |
|
|
715 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.4" /> |
| |
|
|
716 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
717 |
</xs:restriction> |
| |
|
|
718 |
</xs:simpleContent> |
| |
|
|
719 |
</xs:complexType> |
| |
|
|
720 |
</xs:element> |
| |
| |
|
-+ |
722 |
<xs:element name="recurrence_second_surgery_neoplasm_surgical_procedure_name" nillable="true"> |
| |
|
|
723 |
<xs:complexType mixed="true"> |
| |
|
|
724 |
<xs:simpleContent> |
| |
|
|
725 |
<xs:restriction base="utility:clinical_res_attributes"> |
| |
|
|
726 |
<xs:enumeration value="" /> |
| |
|
|
727 |
<xs:enumeration value="Excisional Biopsy" /> |
| |
|
|
728 |
<xs:enumeration value="Incisional Biopsy" /> |
| |
|
|
729 |
<xs:enumeration value="Surgical Resection" /> |
| |
|
|
730 |
<xs:enumeration value="Other Method, Specify Below" /> |
| |
|
|
731 |
<xs:attribute name="cde" type="xs:string" default="3125097" /> |
| |
|
|
732 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
733 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
734 |
</xs:restriction> |
| |
|
|
735 |
</xs:simpleContent> |
| |
|
|
736 |
</xs:complexType> |
| |
|
|
737 |
</xs:element> |
| |
| |
|
-+ |
739 |
<xs:element name="recurrence_second_surgery_neoplasm_surgical_procedure_name_other" nillable="true"> |
| |
|
|
740 |
<xs:complexType> |
| |
|
|
741 |
<xs:simpleContent> |
| |
|
|
742 |
<xs:extension base="xs:string"> |
| |
|
|
743 |
<xs:attributeGroup ref="utility:common_ext_attribute_group" /> |
| |
|
|
744 |
<xs:attribute name="cde" type="xs:string" default="3125102" /> |
| |
|
|
745 |
<xs:attribute name="xsd_ver" type="xs:string" default="2.3" /> |
| |
|
|
746 |
<xs:attribute name="tier" type="xs:string" default="2" /> |
| |
|
|
747 |
</xs:extension> |
| |
|
|
748 |
</xs:simpleContent> |
| |
|
|
749 |
</xs:complexType> |
| |
|
|
750 |
</xs:element> |
| |
| |
|
-+ |
752 |
<xs:simpleType name="yes_or_no_unknown"> |
| |
|
|
753 |
<xs:restriction base="xs:string"> |
| |
|
|
754 |
<xs:enumeration value="YES" /> |
| |
|
|
755 |
<xs:enumeration value="NO" /> |
| |
|
|
756 |
<xs:enumeration value="" /> |
| |
|
|
757 |
</xs:restriction> |
| |
|
|
758 |
</xs:simpleType> |